RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 PRRT2Q7Z6L0 340 aaPredicted RBP11.55□□□□□ -0.56
APLF-207ENST00000627740 SPICE1Q8N0Z3 855 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 PROCA1Q8NCQ7 364 aaPredicted RBP11.55□□□□□ -0.56
APLF-207ENST00000627740 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 HPS5Q9UPZ3 1129 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 RBM19Q9Y4C8 960 aaKnown RBP11.55□□□□□ -0.56
APLF-207ENST00000627740 PARP14Q460N5 1801 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 K7ELQ4 463 aaPredicted RBP11.55□□□□□ -0.56
APLF-207ENST00000627740 DHX16O60231 1041 aaKnown RBP11.55□□□□□ -0.56
APLF-207ENST00000627740 BMP3P12645 472 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 RXRAP19793 462 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 GNAQP50148 359 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 ZNF543Q08ER8 600 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 FASTKD5Q7L8L6 764 aaKnown RBP11.55□□□□□ -0.56
APLF-207ENST00000627740 RAB11FIP4Q86YS3 637 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 CCDC144CPQ8IYA2 1237 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 TMX3Q96JJ7 454 aa11.55□□□□□ -0.56
APLF-207ENST00000627740 ISY1Q9ULR0 285 aaKnown RBP11.55□□□□□ -0.56
APLF-207ENST00000627740 SLC10A3P09131 477 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 CETPP11597 493 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 VCAM1P19320 739 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 CCT2P78371 535 aaKnown RBP11.54□□□□□ -0.56
APLF-207ENST00000627740 GTF3C6Q969F1 213 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 LZTS2Q9BRK4 669 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 MAD2L2Q9UI95 211 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 PALM3A6NDB9 673 aaPredicted RBP11.54□□□□□ -0.56
APLF-207ENST00000627740 RASSF10A6NK89 507 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 LARGE1O95461 756 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 MKRN3Q13064 507 aaKnown RBP11.54□□□□□ -0.56
APLF-207ENST00000627740 KIAA1755Q5JYT7 1200 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 FAM83BQ5T0W9 1011 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 CPLX2Q6PUV4 134 aaKnown RBP11.54□□□□□ -0.56
APLF-207ENST00000627740 GADL1Q6ZQY3 521 aa11.54□□□□□ -0.56
APLF-207ENST00000627740 PAXIP1Q6ZW49 1069 aaPredicted RBP11.54□□□□□ -0.56
APLF-207ENST00000627740 BAZ2BQ9UIF8 2168 aaKnown RBP11.54□□□□□ -0.56
APLF-207ENST00000627740 CPLX1O14810 134 aa11.53□□□□□ -0.56
APLF-207ENST00000627740 SCRN1Q12765 414 aa11.53□□□□□ -0.56
APLF-207ENST00000627740 DEFB115Q30KQ5 88 aa11.53□□□□□ -0.56
APLF-207ENST00000627740 KCTD1Q719H9 257 aa11.53□□□□□ -0.56
APLF-207ENST00000627740 RASGRP2Q7LDG7 609 aa11.53□□□□□ -0.56
APLF-207ENST00000627740 NECAB1Q8N987 351 aa11.53□□□□□ -0.56
APLF-207ENST00000627740 NUP88Q99567 741 aaPredicted RBP11.53□□□□□ -0.56
APLF-207ENST00000627740 TANGO6Q9C0B7 1094 aa11.53□□□□□ -0.56
APLF-207ENST00000627740 RPAP3Q9H6T3 665 aaPredicted RBP11.53□□□□□ -0.56
APLF-207ENST00000627740 NCOA5Q9HCD5 579 aaKnown RBP11.53□□□□□ -0.56
APLF-207ENST00000627740 FRMPD2Q68DX3 1309 aaPredicted RBP11.53□□□□□ -0.56
APLF-207ENST00000627740 MANSC4A6NHS7 340 aaPredicted RBP11.52□□□□□ -0.56
APLF-207ENST00000627740 KLRF2D3W0D1 207 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 PLA2G6O60733 806 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 CDKL5O76039 1030 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 GOLGA8HP0CJ92 632 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 CDC27P30260 824 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 STAT2P52630 851 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 IKQ13123 557 aaPredicted RBP11.52□□□□□ -0.56
APLF-207ENST00000627740 PABPC4Q13310 644 aaKnown RBP eCLIP11.52□□□□□ -0.56
APLF-207ENST00000627740 DGKZQ13574 1117 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 TMTC3Q6ZXV5 915 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 STAG2Q8N3U4 1231 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 CHURC1Q8WUH1 139 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 MS4A4AQ96JQ5 239 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 GPCPD1Q9NPB8 672 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 FEM1BQ9UK73 627 aa11.52□□□□□ -0.56
APLF-207ENST00000627740 CCL15-CCL14A0A0B4J2E2 113 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 FAM155AB1AL88 458 aaPredicted RBP11.52□□□□□ -0.57
APLF-207ENST00000627740 USP17L15C9J2P7 530 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 USP17L13C9JLJ4 530 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 TMEM232C9JQI7 657 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 USP17L11C9JVI0 530 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 USP17L18D6R9N7 530 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 USP17L22D6RA61 530 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 USP17L17D6RBQ6 530 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 USP17L19D6RCP7 530 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 USP17L20D6RJB6 530 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 SMARCA1P28370 1054 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 ADD1P35611 737 aaKnown RBP11.52□□□□□ -0.57
APLF-207ENST00000627740 USP17L24Q0WX57 530 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 CCL15Q16663 113 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 CCDC83Q8IWF9 413 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 FAM217BQ9NTX9 383 aaPredicted RBP11.52□□□□□ -0.57
APLF-207ENST00000627740 AGTPBP1Q9UPW5 1226 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 RLFQ13129 1914 aa11.52□□□□□ -0.57
APLF-207ENST00000627740 INHBEP58166 350 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 MOGSQ13724 837 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 CYP4F22Q6NT55 531 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 BTNL9Q6UXG8 535 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 LLPHQ9BRT6 129 aaKnown RBP11.51□□□□□ -0.57
APLF-207ENST00000627740 TESPA1A2RU30 521 aaPredicted RBP11.51□□□□□ -0.57
APLF-207ENST00000627740 PLEKHA8P1O95397 391 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 HOXA7P31268 230 aaPredicted RBP11.51□□□□□ -0.57
APLF-207ENST00000627740 SREBF2Q12772 1141 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 NOGQ13253 232 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 CUL4AQ13619 759 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 TREML2Q5T2D2 321 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 CATSPERGQ6ZRH7 1159 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 CAPNS2Q96L46 248 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 SLF1Q9BQI6 1058 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 SPZ1Q9BXG8 430 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 SLC45A1Q9Y2W3 748 aa11.51□□□□□ -0.57
APLF-207ENST00000627740 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms