RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 NFXL1Q6ZNB6 911 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 UBAC1Q9BSL1 405 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 FAM198AQ9UFP1 575 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 ZBTB43O43298 467 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 DHX16O60231 1041 aaKnown RBP11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 TLR2O60603 784 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 F13A1P00488 732 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 SLURP2P0DP57 97 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 EN2P19622 333 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 CACNB3P54284 484 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 PPIL2Q13356 520 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 MKRN4PQ13434 485 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 PICALMQ13492 652 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 IQCA1Q86XH1 822 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 CCDC144CPQ8IYA2 1237 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 TMTC2Q8N394 836 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 OTUD5Q96G74 571 aa11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 OSBPL5Q9H0X9 879 aaPredicted RBP11.08□□□□□ -0.64
PDLIM5-223ENST00000627587 CCDC69A6NI79 296 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 CDK8P49336 464 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 METAP2P50579 478 aaKnown RBP eCLIP11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 HMGN5P82970 282 aaKnown RBP11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 PPATQ06203 517 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 TROAPQ12815 778 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 SH3BP5LQ7L8J4 393 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 ZNF654Q8IZM8 581 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 IDI2Q9BXS1 227 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 ZNF341Q9BYN7 854 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 ZNF287Q9HBT7 754 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 KIF3AQ9Y496 699 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 SLC12A7Q9Y666 1083 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 MYH4Q9Y623 1939 aa11.07□□□□□ -0.64
PDLIM5-223ENST00000627587 HOXD10P28358 340 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 TFAP4Q01664 338 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 FAM43AQ8N2R8 423 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 FAM184AQ8NB25 1140 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 DNAJC18Q9H819 358 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 PTCH2Q9Y6C5 1203 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 BAZ2BQ9UIF8 2168 aaKnown RBP11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 OTOFQ9HC10 1997 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 VPS37CA5D8V6 355 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 TSPY2A6NKD2 308 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 GOLGA8AA7E2F4 631 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 DDX11L8A8MPP1 907 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 GOLGA6L22H0YM25 854 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 CPLX1O14810 134 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 RCAN1P53805 252 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 MCTP1Q6DN14 999 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 SPDYE1Q8NFV5 336 aaPredicted RBP11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 FAM151AQ8WW52 585 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 WRNIP1Q96S55 665 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 MKNK2Q9HBH9 465 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 GJB4Q9NTQ9 266 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 LMBRD1Q9NUN5 540 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 SNCAIPQ9Y6H5 919 aa11.06□□□□□ -0.64
PDLIM5-223ENST00000627587 PLIN4Q96Q06 1357 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 DDTLA6NHG4 134 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 BTBD19C9JJ37 291 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 CAPN2P17655 700 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 NOVP48745 357 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 LACTBP83111 547 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 FUT2Q10981 343 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 FOXD4L6Q3SYB3 417 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 IFIT1BQ5T764 474 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 CPLX2Q6PUV4 134 aaKnown RBP11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 FOXD4L3Q6VB84 417 aaPredicted RBP11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 FERMT3Q86UX7 667 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 CDAN1Q8IWY9 1227 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 FANCBQ8NB91 859 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 ANKS1AQ92625 1134 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 PHKBQ93100 1093 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 AIFM3Q96NN9 605 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 TCP11L1Q9NUJ3 509 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 ATRNL1Q5VV63 1379 aa11.05□□□□□ -0.64
PDLIM5-223ENST00000627587 COL2A1P02458 1487 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 IRF6O14896 467 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 PRKAR2AP13861 404 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 SHMT1P34896 483 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 TCP10Q12799 353 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 RESTQ13127 1097 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 FAM173BQ6P4H8 233 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 C17orf99Q6UX52 265 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 TTC6Q86TZ1 520 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 ZNF444Q8N0Y2 327 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 CMTR1Q8N1G2 835 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 ZKSCAN4Q969J2 545 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 ORC3Q9UBD5 711 aaPredicted RBP11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 KIAA0100Q14667 2235 aaKnown RBP11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 CDKL5O76039 1030 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 IFNAR1P17181 557 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 PTMSP20962 102 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 GUCY1A2P33402 732 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 RTN1Q16799 776 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 NEDD1Q8NHV4 660 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 EHD4Q9H223 541 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 ZNF112Q9UJU3 913 aa11.04□□□□□ -0.64
PDLIM5-223ENST00000627587 SSUH2Q9Y2M2 353 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms