RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 TUBE1Q9UJT0 475 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 USP17L5A8MUK1 530 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 POLR2DO15514 142 aaKnown RBP22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 C21orf2O43822 256 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 FOXP4Q8IVH2 680 aaPredicted RBP22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 PCDHA4Q9UN74 947 aa22.48■■□□□ 1.19
CHRNA4-209ENST00000627000 CALML3P27482 149 aa22.47■■□□□ 1.19
CHRNA4-209ENST00000627000 SHMT1P34896 483 aa22.47■■□□□ 1.19
CHRNA4-209ENST00000627000 RBM5P52756 815 aaKnown RBP eCLIP22.47■■□□□ 1.19
CHRNA4-209ENST00000627000 LRRC47Q8N1G4 583 aaKnown RBP22.47■■□□□ 1.19
CHRNA4-209ENST00000627000 PDILTQ8N807 584 aa22.47■■□□□ 1.19
CHRNA4-209ENST00000627000 NAT10Q9H0A0 1025 aaKnown RBP22.47■■□□□ 1.19
CHRNA4-209ENST00000627000 SERTAD1Q9UHV2 236 aa22.47■■□□□ 1.19
CHRNA4-209ENST00000627000 IGKV6D-41A0A0C4DH26 115 aa22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 STXBP3O00186 592 aa22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 TCP10Q12799 353 aa22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 LZTS2Q9BRK4 669 aa22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 SPZ1Q9BXG8 430 aa22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 MORC2Q9Y6X9 1032 aaPredicted RBP22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 FKBP1AP62942 108 aaKnown RBP22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 KIAA2012Q0VF49 1180 aa22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 PTGDRQ13258 359 aa22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 EPSTI1Q96J88 318 aa22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 BARHL2Q9NY43 387 aa22.46■■□□□ 1.19
CHRNA4-209ENST00000627000 MDM2Q00987 491 aaPredicted RBP22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 HOMER1Q86YM7 354 aa22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 UBA5Q9GZZ9 404 aa22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 VAT1LQ9HCJ6 419 aa22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 M0R2N6 131 aa22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 ZNF500O60304 480 aaPredicted RBP22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 PDHBP11177 359 aa22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 MCM7P33993 719 aa22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 ATP2C1P98194 919 aaPredicted RBP22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 SWAP70Q9UH65 585 aa22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 PCDHA5Q9Y5H7 936 aa22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 FRMPD2Q68DX3 1309 aaPredicted RBP22.45■■□□□ 1.18
CHRNA4-209ENST00000627000 SIPA1L1O43166 1804 aa22.44■■□□□ 1.18
CHRNA4-209ENST00000627000 A0A087X0B3 334 aa22.44■■□□□ 1.18
CHRNA4-209ENST00000627000 YDJCA8MPS7 323 aa22.44■■□□□ 1.18
CHRNA4-209ENST00000627000 BMP15O95972 392 aa22.44■■□□□ 1.18
CHRNA4-209ENST00000627000 HLA-DOAP06340 250 aa22.44■■□□□ 1.18
CHRNA4-209ENST00000627000 GRAMD1CQ8IYS0 662 aa22.44■■□□□ 1.18
CHRNA4-209ENST00000627000 MRIQ9BWK5 157 aa22.44■■□□□ 1.18
CHRNA4-209ENST00000627000 DNAJC18Q9H819 358 aa22.44■■□□□ 1.18
CHRNA4-209ENST00000627000 CLIP2Q9UDT6 1046 aa22.44■■□□□ 1.18
CHRNA4-209ENST00000627000 FAM196BA6NMK8 535 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 PPIP5K2O43314 1243 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 PRR29P0C7W0 189 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 TRAPPC10P48553 1259 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 SARM1Q6SZW1 724 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 FAM198AQ9UFP1 575 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 PCDHA6Q9UN73 950 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 PCDHA8Q9Y5H6 950 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 DDTLA6NHG4 134 aaPredicted RBP22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 ACTN4O43707 911 aaKnown RBP22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 CCDC148Q8NFR7 591 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 SYMPKQ92797 1274 aaKnown RBP22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 FERMT2Q96AC1 680 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 PIGSQ96S52 555 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 BPIFA3Q9BQP9 254 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 C10orf71Q711Q0 1435 aa22.43■■□□□ 1.18
CHRNA4-209ENST00000627000 VWA3AA6NCI4 1184 aa22.42■■□□□ 1.18
CHRNA4-209ENST00000627000 HDLBPQ00341 1268 aaKnown RBP22.42■■□□□ 1.18
CHRNA4-209ENST00000627000 KCNF1Q9H3M0 494 aa22.42■■□□□ 1.18
CHRNA4-209ENST00000627000 NRBP1Q9UHY1 535 aa22.42■■□□□ 1.18
CHRNA4-209ENST00000627000 MPHOSPH10O00566 681 aaKnown RBP22.42■■□□□ 1.18
CHRNA4-209ENST00000627000 POSTNQ15063 836 aa22.42■■□□□ 1.18
CHRNA4-209ENST00000627000 IL17AQ16552 155 aa22.42■■□□□ 1.18
CHRNA4-209ENST00000627000 SH3BP5LQ7L8J4 393 aa22.42■■□□□ 1.18
CHRNA4-209ENST00000627000 DRC7Q8IY82 874 aa22.42■■□□□ 1.18
CHRNA4-209ENST00000627000 MYO3BQ8WXR4 1341 aa22.41■■□□□ 1.18
CHRNA4-209ENST00000627000 GREB1LQ9C091 1923 aaPredicted RBP22.41■■□□□ 1.18
CHRNA4-209ENST00000627000 BAG6P46379 1132 aa22.41■■□□□ 1.18
CHRNA4-209ENST00000627000 SHROOM1Q2M3G4 852 aaPredicted RBP22.41■■□□□ 1.18
CHRNA4-209ENST00000627000 CC2D2BQ6DHV5 1058 aa22.41■■□□□ 1.18
CHRNA4-209ENST00000627000 ELOA2Q8IYF1 753 aaPredicted RBP22.41■■□□□ 1.18
CHRNA4-209ENST00000627000 DAGLBQ8NCG7 672 aa22.41■■□□□ 1.18
CHRNA4-209ENST00000627000 DHX58Q96C10 678 aa22.41■■□□□ 1.18
CHRNA4-209ENST00000627000 RRP36Q96EU6 259 aaKnown RBP22.41■■□□□ 1.18
CHRNA4-209ENST00000627000 CCDC194A0A1B0GVG4 234 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 TTLL1O95922 423 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 PTGS1P23219 599 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 NAPAP54920 295 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 NCAPHQ15003 741 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 IDI2Q9BXS1 227 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 SERPINA10Q9UK55 444 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 MYH4Q9Y623 1939 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 BMP6P22004 513 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 SF3B2Q13435 895 aaKnown RBP22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 SUPT20HQ8NEM7 779 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 EHD4Q9H223 541 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 RIOX1Q9H6W3 641 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 GPCPD1Q9NPB8 672 aa22.4■■□□□ 1.18
CHRNA4-209ENST00000627000 GOLGA6L6A8MZA4 724 aa22.39■■□□□ 1.18
CHRNA4-209ENST00000627000 SNHG28P0DPA3 235 aa22.39■■□□□ 1.18
CHRNA4-209ENST00000627000 SMARCA1P28370 1054 aa22.39■■□□□ 1.18
CHRNA4-209ENST00000627000 INF2Q27J81 1249 aa22.39■■□□□ 1.18
CHRNA4-209ENST00000627000 TTLL6Q8N841 843 aa22.39■■□□□ 1.18
CHRNA4-209ENST00000627000 C4orf32Q8N8J7 132 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms