RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 IL1RAPL2Q9NP60 686 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 DCP1AQ9NPI6 582 aaPredicted RBP12.86□□□□□ -0.35
TCF4-253ENST00000626466 XPNPEP3Q9NQH7 507 aa12.86□□□□□ -0.35
TCF4-253ENST00000626466 A0A1W2PQ45 241 aaPredicted RBP12.85□□□□□ -0.35
TCF4-253ENST00000626466 A0A1W2PQY0 241 aa12.85□□□□□ -0.35
TCF4-253ENST00000626466 TCRBV5S4A2TA0A5A2 114 aa12.85□□□□□ -0.35
TCF4-253ENST00000626466 PQBP1O60828 265 aaKnown RBP12.85□□□□□ -0.35
TCF4-253ENST00000626466 IGSF3O75054 1194 aa12.85□□□□□ -0.35
TCF4-253ENST00000626466 CLTBP09497 229 aa12.85□□□□□ -0.35
TCF4-253ENST00000626466 C1orf53Q5VUE5 145 aa12.85□□□□□ -0.35
TCF4-253ENST00000626466 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
TCF4-253ENST00000626466 CERS3Q8IU89 383 aa12.85□□□□□ -0.35
TCF4-253ENST00000626466 ABRAQ8N0Z2 381 aa12.85□□□□□ -0.35
TCF4-253ENST00000626466 HOXC10Q9NYD6 342 aa12.85□□□□□ -0.35
TCF4-253ENST00000626466 ZNF532Q9HCE3 1301 aa12.85□□□□□ -0.35
TCF4-253ENST00000626466 LAMA2P24043 3122 aaKnown RBP12.84□□□□□ -0.35
TCF4-253ENST00000626466 PARP14Q460N5 1801 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 MYADML2A6NDP7 307 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 KIAA0355O15063 1070 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 ZNF865P0CJ78 1059 aaPredicted RBP12.84□□□□□ -0.35
TCF4-253ENST00000626466 ICA1Q05084 483 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 ZNF792Q3KQV3 632 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 CEP85Q6P2H3 762 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 TMEM179Q6ZVK1 233 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 ITPRIPQ8IWB1 547 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 MB21D1Q8N884 522 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 CRNKL1Q9BZJ0 848 aaKnown RBP12.84□□□□□ -0.35
TCF4-253ENST00000626466 MROH8Q9H579 483 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 VCPKMTQ9H867 229 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 ARMT1Q9H993 441 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 RAPGEFL1Q9UHV5 662 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 TMX2Q9Y320 296 aa12.84□□□□□ -0.35
TCF4-253ENST00000626466 GOLIM4O00461 696 aa12.83□□□□□ -0.36
TCF4-253ENST00000626466 ADAMTS4O75173 837 aa12.83□□□□□ -0.36
TCF4-253ENST00000626466 RARBP10826 455 aa12.83□□□□□ -0.36
TCF4-253ENST00000626466 FCER1AP12319 257 aa12.83□□□□□ -0.36
TCF4-253ENST00000626466 DNAJB2P25686 324 aa12.83□□□□□ -0.36
TCF4-253ENST00000626466 FAAP100Q0VG06 881 aa12.83□□□□□ -0.36
TCF4-253ENST00000626466 SLC9C2Q5TAH2 1124 aa12.83□□□□□ -0.36
TCF4-253ENST00000626466 REPS2Q8NFH8 660 aa12.83□□□□□ -0.36
TCF4-253ENST00000626466 MMP19Q99542 508 aa12.83□□□□□ -0.36
TCF4-253ENST00000626466 TACC3Q9Y6A5 838 aa12.83□□□□□ -0.36
TCF4-253ENST00000626466 ROBO3Q96MS0 1386 aa12.82□□□□□ -0.36
TCF4-253ENST00000626466 GRXCR1A8MXD5 290 aa12.82□□□□□ -0.36
TCF4-253ENST00000626466 ADCY6O43306 1168 aa12.82□□□□□ -0.36
TCF4-253ENST00000626466 RAG1P15918 1043 aa12.82□□□□□ -0.36
TCF4-253ENST00000626466 PBX2P40425 430 aa12.82□□□□□ -0.36
TCF4-253ENST00000626466 FPGSQ05932 587 aa12.82□□□□□ -0.36
TCF4-253ENST00000626466 RIOX2Q8IUF8 465 aa12.82□□□□□ -0.36
TCF4-253ENST00000626466 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
TCF4-253ENST00000626466 ZNF214Q9UL59 606 aaPredicted RBP12.82□□□□□ -0.36
TCF4-253ENST00000626466 ADAMTS5Q9UNA0 930 aa12.82□□□□□ -0.36
TCF4-253ENST00000626466 SYNRGQ9UMZ2 1314 aa12.82□□□□□ -0.36
TCF4-253ENST00000626466 COL11A1P12107 1806 aaPredicted RBP12.81□□□□□ -0.36
TCF4-253ENST00000626466 TMEM265A0A087WTH1 108 aa12.81□□□□□ -0.36
TCF4-253ENST00000626466 HAX1O00165 279 aa12.81□□□□□ -0.36
TCF4-253ENST00000626466 WDR46O15213 610 aaKnown RBP12.81□□□□□ -0.36
TCF4-253ENST00000626466 MBD4O95243 580 aa12.81□□□□□ -0.36
TCF4-253ENST00000626466 EEF2P13639 858 aaKnown RBP12.81□□□□□ -0.36
TCF4-253ENST00000626466 FAM83BQ5T0W9 1011 aa12.81□□□□□ -0.36
TCF4-253ENST00000626466 C16orf59Q7L2K0 433 aa12.81□□□□□ -0.36
TCF4-253ENST00000626466 NUP88Q99567 741 aaPredicted RBP12.81□□□□□ -0.36
TCF4-253ENST00000626466 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.81□□□□□ -0.36
TCF4-253ENST00000626466 TINF2Q9BSI4 451 aa12.81□□□□□ -0.36
TCF4-253ENST00000626466 ARHGEF10LQ9HCE6 1279 aa12.81□□□□□ -0.36
TCF4-253ENST00000626466 TMEM39AQ9NV64 488 aa12.81□□□□□ -0.36
TCF4-253ENST00000626466 SLC5A4Q9NY91 659 aa12.81□□□□□ -0.36
TCF4-253ENST00000626466 TBX21Q9UL17 535 aa12.81□□□□□ -0.36
TCF4-253ENST00000626466 APBB1O00213 710 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 VWA5AO00534 786 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 CDK8P49336 464 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 ACLYP53396 1101 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 CCSAPQ6IQ19 270 aaPredicted RBP12.8□□□□□ -0.36
TCF4-253ENST00000626466 RNF180Q86T96 592 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 KLHDC9Q8NEP7 349 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 RHPN1Q8TCX5 695 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.8□□□□□ -0.36
TCF4-253ENST00000626466 BCL11AQ9H165 835 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 SWAP70Q9UH65 585 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 NRBP1Q9UHY1 535 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 PPP1R9AQ9ULJ8 1098 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 PRUNE2Q8WUY3 3088 aa12.8□□□□□ -0.36
TCF4-253ENST00000626466 SPTBN5Q9NRC6 3674 aaKnown RBP12.8□□□□□ -0.36
TCF4-253ENST00000626466 VCANP13611 3396 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 SLC25A27O95847 323 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 SNAI1O95863 264 aaPredicted RBP12.79□□□□□ -0.36
TCF4-253ENST00000626466 AKR1A1P14550 325 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 KCTD2Q14681 263 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 C12orf60Q5U649 245 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 ANKRD33Q7Z3H0 272 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
TCF4-253ENST00000626466 PIP4P2Q8N4L2 257 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 PPM1EQ8WY54 764 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 TIFAQ96CG3 184 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 FGD4Q96M96 766 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 ZNF576Q9H609 170 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 STARD7Q9NQZ5 370 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 RIPK3Q9Y572 518 aa12.79□□□□□ -0.36
TCF4-253ENST00000626466 SMCHD1A6NHR9 2005 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms