RNA–Protein interactions for RNA: ENST00000624949.1

PCDHB12-203, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 1,963 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-203ENST00000624949 KLRG1Q96E93 195 aa23.59■■□□□ 1.37
PCDHB12-203ENST00000624949 GBP4Q96PP9 640 aa23.59■■□□□ 1.37
PCDHB12-203ENST00000624949 UBA5Q9GZZ9 404 aa23.59■■□□□ 1.37
PCDHB12-203ENST00000624949 ZNF112Q9UJU3 913 aa23.59■■□□□ 1.37
PCDHB12-203ENST00000624949 F13A1P00488 732 aa23.58■■□□□ 1.37
PCDHB12-203ENST00000624949 ASPRV1Q53RT3 343 aa23.58■■□□□ 1.37
PCDHB12-203ENST00000624949 CDCA5Q96FF9 252 aa23.58■■□□□ 1.37
PCDHB12-203ENST00000624949 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.58■■□□□ 1.37
PCDHB12-203ENST00000624949 BAZ2BQ9UIF8 2168 aaKnown RBP23.58■■□□□ 1.37
PCDHB12-203ENST00000624949 MYH6P13533 1939 aa23.58■■□□□ 1.36
PCDHB12-203ENST00000624949 DDX11L8A8MPP1 907 aa23.58■■□□□ 1.36
PCDHB12-203ENST00000624949 CYTH3O43739 400 aa23.58■■□□□ 1.36
PCDHB12-203ENST00000624949 PDIA4P13667 645 aaKnown RBP23.58■■□□□ 1.36
PCDHB12-203ENST00000624949 SLC1A4P43007 532 aa23.58■■□□□ 1.36
PCDHB12-203ENST00000624949 ZNF543Q08ER8 600 aa23.58■■□□□ 1.36
PCDHB12-203ENST00000624949 SLC35G1Q2M3R5 365 aa23.58■■□□□ 1.36
PCDHB12-203ENST00000624949 SPICE1Q8N0Z3 855 aa23.58■■□□□ 1.36
PCDHB12-203ENST00000624949 LZTS2Q9BRK4 669 aa23.58■■□□□ 1.36
PCDHB12-203ENST00000624949 USP2O75604 605 aaPredicted RBP23.57■■□□□ 1.36
PCDHB12-203ENST00000624949 NDUFB10O96000 172 aa23.57■■□□□ 1.36
PCDHB12-203ENST00000624949 MAP1SQ66K74 1059 aaPredicted RBP23.57■■□□□ 1.36
PCDHB12-203ENST00000624949 SCYL3Q8IZE3 742 aa23.57■■□□□ 1.36
PCDHB12-203ENST00000624949 GMCL1P1Q8NEA9 526 aa23.57■■□□□ 1.36
PCDHB12-203ENST00000624949 CHAMP1Q96JM3 812 aa23.57■■□□□ 1.36
PCDHB12-203ENST00000624949 VAT1LQ9HCJ6 419 aa23.57■■□□□ 1.36
PCDHB12-203ENST00000624949 TMX2Q9Y320 296 aa23.57■■□□□ 1.36
PCDHB12-203ENST00000624949 PKN1Q16512 942 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 MCTP1Q6DN14 999 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 TTBK2Q6IQ55 1244 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 NUP88Q99567 741 aaPredicted RBP23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 TRAK2O60296 914 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 TRIM29Q14134 588 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 FBXO18Q8NFZ0 1043 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 DCAF4Q8WV16 495 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 FEZ1Q99689 392 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 NMRK2Q9NPI5 230 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 PICK1Q9NRD5 415 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 DOCK1Q14185 1865 aa23.56■■□□□ 1.36
PCDHB12-203ENST00000624949 PPP1R12BO60237 982 aaPredicted RBP23.55■■□□□ 1.36
PCDHB12-203ENST00000624949 NF2P35240 595 aa23.55■■□□□ 1.36
PCDHB12-203ENST00000624949 SLC16A2P36021 539 aa23.55■■□□□ 1.36
PCDHB12-203ENST00000624949 GPATCH4Q5T3I0 446 aaKnown RBP23.55■■□□□ 1.36
PCDHB12-203ENST00000624949 GOPCQ9HD26 462 aa23.55■■□□□ 1.36
PCDHB12-203ENST00000624949 GINM1Q9NU53 330 aa23.55■■□□□ 1.36
PCDHB12-203ENST00000624949 KIAA1755Q5JYT7 1200 aa23.54■■□□□ 1.36
PCDHB12-203ENST00000624949 KRT40Q6A162 431 aa23.54■■□□□ 1.36
PCDHB12-203ENST00000624949 HOMER1Q86YM7 354 aa23.54■■□□□ 1.36
PCDHB12-203ENST00000624949 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.54■■□□□ 1.36
PCDHB12-203ENST00000624949 SPZ1Q9BXG8 430 aa23.54■■□□□ 1.36
PCDHB12-203ENST00000624949 SH2D4AQ9H788 454 aa23.54■■□□□ 1.36
PCDHB12-203ENST00000624949 BAG4O95429 457 aaKnown RBP23.54■■□□□ 1.36
PCDHB12-203ENST00000624949 VPS54Q9P1Q0 977 aa23.54■■□□□ 1.36
PCDHB12-203ENST00000624949 SYNPO2Q9UMS6 1093 aa23.54■■□□□ 1.36
PCDHB12-203ENST00000624949 TTLL12Q14166 644 aaPredicted RBP23.53■■□□□ 1.36
PCDHB12-203ENST00000624949 GMCL1Q96IK5 515 aa23.53■■□□□ 1.36
PCDHB12-203ENST00000624949 KCNJ14Q9UNX9 436 aa23.53■■□□□ 1.36
PCDHB12-203ENST00000624949 BMP3P12645 472 aa23.52■■□□□ 1.36
PCDHB12-203ENST00000624949 SCG2P13521 617 aa23.52■■□□□ 1.36
PCDHB12-203ENST00000624949 PTPRAP18433 802 aa23.52■■□□□ 1.36
PCDHB12-203ENST00000624949 PFKFB3Q16875 520 aaPredicted RBP23.52■■□□□ 1.36
PCDHB12-203ENST00000624949 VCPKMTQ9H867 229 aa23.52■■□□□ 1.36
PCDHB12-203ENST00000624949 MOB2Q70IA6 237 aa23.52■■□□□ 1.36
PCDHB12-203ENST00000624949 RRP36Q96EU6 259 aaKnown RBP23.52■■□□□ 1.36
PCDHB12-203ENST00000624949 PIGSQ96S52 555 aa23.52■■□□□ 1.36
PCDHB12-203ENST00000624949 RBM27Q9P2N5 1060 aaKnown RBP23.52■■□□□ 1.36
PCDHB12-203ENST00000624949 TRAF5O00463 557 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 SMARCA1P28370 1054 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 MAP3K9P80192 1104 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 IKQ13123 557 aaPredicted RBP23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 FAM173BQ6P4H8 233 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 ADGRF4Q8IZF3 695 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 GPKOWQ92917 476 aaPredicted RBP eCLIP23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 RIOX1Q9H6W3 641 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 ZNF408Q9H9D4 720 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 ZHX2Q9Y6X8 837 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 XBP1P17861 261 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 IREB2P48200 963 aaKnown RBP23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 FMR1Q06787 632 aaKnown RBP eCLIP23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 SPP2Q13103 211 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 DGKZQ13574 1117 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 VGLL4Q14135 290 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 FAM83BQ5T0W9 1011 aa23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 SEC63Q9UGP8 760 aaKnown RBP23.51■■□□□ 1.35
PCDHB12-203ENST00000624949 TMEM232C9JQI7 657 aa23.5■■□□□ 1.35
PCDHB12-203ENST00000624949 RESTQ13127 1097 aa23.5■■□□□ 1.35
PCDHB12-203ENST00000624949 MTMR2Q13614 643 aa23.5■■□□□ 1.35
PCDHB12-203ENST00000624949 SHISA4Q96DD7 197 aa23.5■■□□□ 1.35
PCDHB12-203ENST00000624949 AS3MTQ9HBK9 375 aa23.5■■□□□ 1.35
PCDHB12-203ENST00000624949 ATP6V1DQ9Y5K8 247 aa23.5■■□□□ 1.35
PCDHB12-203ENST00000624949 TRIM75PA6NK02 468 aa23.49■■□□□ 1.35
PCDHB12-203ENST00000624949 USP17L10C9JJH3 530 aa23.49■■□□□ 1.35
PCDHB12-203ENST00000624949 NOL9Q5SY16 702 aaKnown RBP23.49■■□□□ 1.35
PCDHB12-203ENST00000624949 HEATR3Q7Z4Q2 680 aa23.49■■□□□ 1.35
PCDHB12-203ENST00000624949 LDHDQ86WU2 507 aa23.49■■□□□ 1.35
PCDHB12-203ENST00000624949 JMJD4Q9H9V9 463 aa23.49■■□□□ 1.35
PCDHB12-203ENST00000624949 CSADQ9Y600 493 aa23.49■■□□□ 1.35
PCDHB12-203ENST00000624949 GNL2Q13823 731 aaKnown RBP23.49■■□□□ 1.35
PCDHB12-203ENST00000624949 ZNF280CQ8ND82 737 aa23.49■■□□□ 1.35
PCDHB12-203ENST00000624949 ZSCAN16Q9H4T2 348 aaPredicted RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms