RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 ZNF579Q8NAF0 562 aaKnown RBP15.17■□□□□ 0.02
C3orf56-201ENST00000624688 PRMT6Q96LA8 375 aaPredicted RBP15.17■□□□□ 0.02
C3orf56-201ENST00000624688 GMLQ99445 158 aa15.17■□□□□ 0.02
C3orf56-201ENST00000624688 TDRD3Q9H7E2 651 aaKnown RBP15.17■□□□□ 0.02
C3orf56-201ENST00000624688 RRAGDQ9NQL2 400 aaPredicted RBP15.17■□□□□ 0.02
C3orf56-201ENST00000624688 BARHL2Q9NY43 387 aa15.17■□□□□ 0.02
C3orf56-201ENST00000624688 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
C3orf56-201ENST00000624688 NOL7Q9UMY1 257 aaKnown RBP15.17■□□□□ 0.02
C3orf56-201ENST00000624688 PCDHA4Q9UN74 947 aa15.17■□□□□ 0.02
C3orf56-201ENST00000624688 ZBTB7AO95365 584 aa15.16■□□□□ 0.02
C3orf56-201ENST00000624688 TTLL1O95922 423 aa15.16■□□□□ 0.02
C3orf56-201ENST00000624688 VIL1P09327 827 aaKnown RBP15.16■□□□□ 0.02
C3orf56-201ENST00000624688 ZNF165P49910 485 aa15.16■□□□□ 0.02
C3orf56-201ENST00000624688 SPECC1Q5M775 1068 aa15.16■□□□□ 0.02
C3orf56-201ENST00000624688 TTC38Q5R3I4 469 aa15.16■□□□□ 0.02
C3orf56-201ENST00000624688 RSBN1LQ6PCB5 846 aaPredicted RBP15.16■□□□□ 0.02
C3orf56-201ENST00000624688 PIK3AP1Q6ZUJ8 805 aa15.16■□□□□ 0.02
C3orf56-201ENST00000624688 DAGLBQ8NCG7 672 aa15.16■□□□□ 0.02
C3orf56-201ENST00000624688 CLIP2Q9UDT6 1046 aa15.16■□□□□ 0.02
C3orf56-201ENST00000624688 KCNH3Q9ULD8 1083 aa15.16■□□□□ 0.02
C3orf56-201ENST00000624688 FAM196BA6NMK8 535 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 PSMD14O00487 310 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 CAVIN2O95810 425 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 IQCB1Q15051 598 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 HS1BP3Q53T59 392 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 HEATR3Q7Z4Q2 680 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 LARGE2Q8N3Y3 721 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 CCDC17Q96LX7 622 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 VPS33BQ9H267 617 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 RIOX1Q9H6W3 641 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 PI4KBQ9UBF8 816 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 ATRNL1Q5VV63 1379 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 MYH4Q9Y623 1939 aa15.15■□□□□ 0.02
C3orf56-201ENST00000624688 RAD17O75943 681 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 TRAPPC10P48553 1259 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 TGFB2P61812 414 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 ZNF174Q15697 407 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 METTL16Q86W50 562 aaKnown RBP15.14■□□□□ 0.01
C3orf56-201ENST00000624688 CCDC125Q86Z20 511 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 FAM177A1Q8N128 213 aaPredicted RBP15.14■□□□□ 0.01
C3orf56-201ENST00000624688 CCDC148Q8NFR7 591 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 UBA5Q9GZZ9 404 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 CSRNP2Q9H175 543 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 ANO10Q9NW15 660 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 PCDHA6Q9UN73 950 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 PCDHA8Q9Y5H6 950 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 FRMPD2Q68DX3 1309 aaPredicted RBP15.14■□□□□ 0.01
C3orf56-201ENST00000624688 COL2A1P02458 1487 aaPredicted RBP15.14■□□□□ 0.01
C3orf56-201ENST00000624688 BRCA1P38398 1863 aaKnown RBP15.14■□□□□ 0.01
C3orf56-201ENST00000624688 ENTPD3O75355 529 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 BMP15O95972 392 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 ATP2C1P98194 919 aaPredicted RBP15.14■□□□□ 0.01
C3orf56-201ENST00000624688 SHROOM1Q2M3G4 852 aaPredicted RBP15.14■□□□□ 0.01
C3orf56-201ENST00000624688 LONRF3Q496Y0 759 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 ASPRV1Q53RT3 343 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 GALNT17Q6IS24 598 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 TATDN1Q6P1N9 297 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 KRBA2Q6ZNG9 492 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 RASGRP4Q8TDF6 673 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 RRP36Q96EU6 259 aaKnown RBP15.14■□□□□ 0.01
C3orf56-201ENST00000624688 PIGSQ96S52 555 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 RTN4Q9NQC3 1192 aaKnown RBP15.14■□□□□ 0.01
C3orf56-201ENST00000624688 PIM2Q9P1W9 311 aa15.14■□□□□ 0.01
C3orf56-201ENST00000624688 ATF5Q9Y2D1 282 aaPredicted RBP15.14■□□□□ 0.01
C3orf56-201ENST00000624688 ESPNB1AK53 854 aa15.13■□□□□ 0.01
C3orf56-201ENST00000624688 MPHOSPH10O00566 681 aaKnown RBP15.13■□□□□ 0.01
C3orf56-201ENST00000624688 USP49Q70CQ1 688 aa15.13■□□□□ 0.01
C3orf56-201ENST00000624688 FOXP4Q8IVH2 680 aaPredicted RBP15.13■□□□□ 0.01
C3orf56-201ENST00000624688 ZSCAN29Q8IWY8 852 aaPredicted RBP15.13■□□□□ 0.01
C3orf56-201ENST00000624688 ZMYND12Q9H0C1 365 aa15.13■□□□□ 0.01
C3orf56-201ENST00000624688 FAM13BQ9NYF5 915 aa15.13■□□□□ 0.01
C3orf56-201ENST00000624688 TUBE1Q9UJT0 475 aa15.13■□□□□ 0.01
C3orf56-201ENST00000624688 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 MDM2Q00987 491 aaPredicted RBP15.12■□□□□ 0.01
C3orf56-201ENST00000624688 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 PTGDRQ13258 359 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 CERKLQ49MI3 558 aaPredicted RBP15.12■□□□□ 0.01
C3orf56-201ENST00000624688 SOGA3Q5TF21 947 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 ELOA2Q8IYF1 753 aaPredicted RBP15.12■□□□□ 0.01
C3orf56-201ENST00000624688 MTFR1LQ9H019 292 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 VAT1LQ9HCJ6 419 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 DPCR1Q3MIW9 517 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 SIAH1Q8IUQ4 282 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 DHX40Q8IX18 779 aaKnown RBP15.12■□□□□ 0.01
C3orf56-201ENST00000624688 C4orf32Q8N8J7 132 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 FERMT2Q96AC1 680 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 GPCPD1Q9NPB8 672 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 ZNRF3Q9ULT6 936 aa15.12■□□□□ 0.01
C3orf56-201ENST00000624688 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
C3orf56-201ENST00000624688 FER1L6Q2WGJ9 1857 aa15.11■□□□□ 0.01
C3orf56-201ENST00000624688 FOXN1O15353 648 aa15.11■□□□□ 0.01
C3orf56-201ENST00000624688 MCM7P33993 719 aa15.11■□□□□ 0.01
C3orf56-201ENST00000624688 NAPAP54920 295 aa15.11■□□□□ 0.01
C3orf56-201ENST00000624688 NLRP12P59046 1061 aa15.11■□□□□ 0.01
C3orf56-201ENST00000624688 PLCB2Q00722 1185 aa15.11■□□□□ 0.01
C3orf56-201ENST00000624688 PNOCQ13519 176 aa15.11■□□□□ 0.01
C3orf56-201ENST00000624688 IL17AQ16552 155 aa15.11■□□□□ 0.01
C3orf56-201ENST00000624688 NIM1KQ8IY84 436 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms