RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ZNF365Q70YC5 407 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 SLC35F6Q8N357 371 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 ZNF526Q8TF50 670 aaPredicted RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 OSBPL3Q9H4L5 887 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 CDC23Q9UJX2 597 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 NEURL1BA8MQ27 555 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 CHMP2AO43633 222 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 KRT5P13647 590 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 CASP14P31944 242 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 MORC3Q14149 939 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 NEDD9Q14511 834 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 NBPF14Q5TI25 921 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 SFMBT2Q5VUG0 894 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 CABP7Q86V35 215 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 CERS3Q8IU89 383 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 SREK1Q8WXA9 508 aaKnown RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 ARHGEF2Q92974 986 aaKnown RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 EPN1Q9Y6I3 576 aaPredicted RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 SBNO1A3KN83 1393 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 FGAP02671 866 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 IL2RBP14784 551 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 ATP5DP30049 168 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 CLCN6P51797 869 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 ZNF131P52739 623 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 SP4Q02446 784 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 INF2Q27J81 1249 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 FBXO38Q6PIJ6 1188 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 SRGAP1Q7Z6B7 1085 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 FCHSD1Q86WN1 690 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 LMNTD2Q8IXW0 634 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 TRIM58Q8NG06 486 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 MICAL1Q8TDZ2 1067 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 HAUS4Q9H6D7 363 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 STK38LQ9Y2H1 464 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 FAN1Q9Y2M0 1017 aa6.25□□□□□ -1.41
ERCC6-213ENST00000624341 RRP15Q9Y3B9 282 aaKnown RBP6.25□□□□□ -1.41
ERCC6-213ENST00000624341 EDC4Q6P2E9 1401 aaKnown RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 NONOQ15233 471 aaKnown RBP eCLIP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 ZNF804AQ7Z570 1209 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 ZNF654Q8IZM8 581 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 FAM71BQ8TC56 605 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 NGLY1Q96IV0 654 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 AATFQ9NY61 560 aaKnown RBP eCLIP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 CYP21A2P08686 494 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 ATP2A2P16615 1042 aaKnown RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 ARID4AP29374 1257 aaPredicted RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 FAM47AQ5JRC9 791 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 SPATA1Q5VX52 437 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 CCDC105Q8IYK2 499 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 ANKRD42Q8N9B4 389 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 MED4Q9NPJ6 270 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 TLR7Q9NYK1 1049 aaKnown RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 CPSF2Q9P2I0 782 aaKnown RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 KCNK3O14649 394 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 PPFIA4O75335 1185 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 ERCC5P28715 1186 aaPredicted RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 ARL1P40616 181 aaPredicted RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 PSMC4P43686 418 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 TRAF1Q13077 416 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 NAA30Q147X3 362 aaPredicted RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 UBL4BQ8N7F7 174 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 UHMK1Q8TAS1 419 aaKnown RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 RTEL1Q9NZ71 1219 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 TXNDC16Q9P2K2 825 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 DENND2AQ9ULE3 1009 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 A0A1W2PQ27 194 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 A0A1W2PQ64 194 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 A0A1W2PQD8 194 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 FLOT1O75955 427 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 BIRC3Q13489 604 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 MAEAQ7L5Y9 396 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 ZNF589Q86UQ0 364 aaPredicted RBP6.24□□□□□ -1.41
ERCC6-213ENST00000624341 TEX11Q8IYF3 940 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 CCDC170Q8IYT3 715 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 CACNA2D3Q8IZS8 1091 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 SPTLC3Q9NUV7 552 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 TSKSQ9UJT2 592 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 HYOU1Q9Y4L1 999 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 PTPRUQ92729 1446 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 SH3TC1Q8TE82 1336 aa6.24□□□□□ -1.41
ERCC6-213ENST00000624341 PLCG2P16885 1265 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 RFX1P22670 979 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 CDC25BP30305 580 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 TAOK1Q7L7X3 1001 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 KSR1Q8IVT5 923 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 SPATA5Q8NB90 893 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 MCUR1Q96AQ8 359 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 PARD6BQ9BYG5 372 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 FEZ2Q9UHY8 353 aaPredicted RBP6.23□□□□□ -1.41
ERCC6-213ENST00000624341 RIMBP2O15034 1052 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 ABCB4P21439 1286 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 DNM2P50570 870 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 HNRNPH2P55795 449 aaKnown RBP6.23□□□□□ -1.41
ERCC6-213ENST00000624341 SARNPP82979 210 aaKnown RBP6.23□□□□□ -1.41
ERCC6-213ENST00000624341 TPTE2Q6XPS3 522 aa6.23□□□□□ -1.41
ERCC6-213ENST00000624341 NSUN7Q8NE18 718 aaKnown RBP6.23□□□□□ -1.41
ERCC6-213ENST00000624341 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.23□□□□□ -1.41
ERCC6-213ENST00000624341 LPIN2Q92539 896 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms