RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 USP17L1Q7RTZ2 530 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 STAG2Q8N3U4 1231 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 GPR101Q96P66 508 aaPredicted RBP9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 RTFDC1Q9BY42 306 aaPredicted RBP9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 ZNF287Q9HBT7 754 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 CD209Q9NNX6 404 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 SAMSN1Q9NSI8 373 aaKnown RBP9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 ADAMTS3O15072 1205 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 UFL1O94874 794 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 ST5P78524 1137 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 E2F4Q16254 413 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 FCHSD1Q86WN1 690 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 MAPKAPK5Q8IW41 473 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 GPKOWQ92917 476 aaPredicted RBP eCLIP9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 RBM17Q96I25 401 aaKnown RBP9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 GGA1Q9UJY5 639 aa9.45□□□□□ -0.9
SND1-IT1-201ENST00000623342 SYNRGQ9UMZ2 1314 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 ARHGAP6O43182 974 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 IL1R1P14778 569 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 CD44P16070 742 aaKnown RBP9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 RASA1P20936 1047 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 CASP1P29466 404 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 LONP1P36776 959 aaKnown RBP9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 BTDP43251 543 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 CUL4BQ13620 913 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 NR1I3Q14994 352 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 IL17AQ16552 155 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 PTPN21Q16825 1174 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 GALNT17Q6IS24 598 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 CCDC148Q8NFR7 591 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 UBE2Q2Q8WVN8 375 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 LZTS2Q9BRK4 669 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 BCL11BQ9C0K0 894 aaPredicted RBP9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 SAP30BPQ9UHR5 308 aaKnown RBP9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 BAZ2BQ9UIF8 2168 aaKnown RBP9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 FAM205AQ6ZU69 1335 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 GPR75-ASB3A0A0A6YYF3 556 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 A0A1B0GTH6 734 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 PPP1R3GB7ZBB8 358 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 TRIM37O94972 964 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 GYS1P13807 737 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 GOLGA8FQ08AF8 430 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 GOLGA8DPQ0D2H9 430 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 KLHL10Q6JEL2 608 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 PDXDC2PQ6P474 469 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 SYT10Q6XYQ8 523 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 TMEM139Q8IV31 216 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 C4orf32Q8N8J7 132 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 DAGLBQ8NCG7 672 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 SLC44A5Q8NCS7 719 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 ARID3AQ99856 593 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 TMEM47Q9BQJ4 181 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 STX8Q9UNK0 236 aa9.44□□□□□ -0.9
SND1-IT1-201ENST00000623342 CCDC194A0A1B0GVG4 234 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 PALM3A6NDB9 673 aaPredicted RBP9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 M0R2N6 131 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 ZSCAN12O43309 604 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 GTPBP6O43824 516 aaPredicted RBP9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 ONECUT3O60422 494 aaPredicted RBP9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 BBOX1O75936 387 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 SERPINB2P05120 415 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 PLCG2P16885 1265 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 TXLNAP40222 546 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 PPP4R3BQ5MIZ7 849 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 WWC2Q6AWC2 1192 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 C16orf86Q6ZW13 317 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 HOMER1Q86YM7 354 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 TEX11Q8IYF3 940 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 FAM177A1Q8N128 213 aaPredicted RBP9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 ERO1AQ96HE7 468 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 BAG1Q99933 345 aaPredicted RBP9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 BARHL2Q9NY43 387 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 ZNF215Q9UL58 517 aaPredicted RBP9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 CYTH3O43739 400 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 STX10O60499 249 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 SLU7O95391 586 aaKnown RBP9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 CDK8P49336 464 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 STX17P56962 302 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 ETF1P62495 437 aaKnown RBP9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 SLC35G1Q2M3R5 365 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 CDKAL1Q5VV42 579 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 TYW1BQ6NUM6 668 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 HEATR3Q7Z4Q2 680 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 SLF2Q8IX21 1173 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 PROM2Q8N271 834 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 TC2NQ8N9U0 490 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 RASGRP4Q8TDF6 673 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 STAMQ92783 540 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 CTAGE1Q96RT6 745 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 L2HGDHQ9H9P8 463 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 PODXL2Q9NZ53 605 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 PCDHA6Q9UN73 950 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 PCDHA8Q9Y5H6 950 aa9.43□□□□□ -0.9
SND1-IT1-201ENST00000623342 PHLPP2Q6ZVD8 1323 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 UBR3Q6ZT12 1888 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 STXBP3O00186 592 aa9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 NAA30Q147X3 362 aaPredicted RBP9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 APTXQ7Z2E3 356 aaKnown RBP9.42□□□□□ -0.9
SND1-IT1-201ENST00000623342 REXO1L1PQ8IX06 675 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms