RNA–Protein interactions for RNA: ENST00000622698.4

PCDH11Y-207, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-207ENST00000622698 LAMB4A4D0S4 1761 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 SMARCA1P28370 1054 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 SPP2Q13103 211 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 AP3B2Q13367 1082 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 CTR9Q6PD62 1173 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 LRRC2Q9BYS8 371 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 ELP3Q9H9T3 547 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 H0YCG3 227 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 FIBPO43427 364 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 SCG2P13521 617 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 PLCD1P51178 756 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 CNKSR2Q8WXI2 1034 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 ANAPC4Q9UJX5 808 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 CCL15-CCL14A0A0B4J2E2 113 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 PNMA6FA0A0J9YX94 578 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 PFKFB2O60825 505 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 CCL15Q16663 113 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 DTHD1Q6ZMT9 781 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 RSPH3Q86UC2 560 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 CREBRFQ8IUR6 639 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 PCDHA1Q9Y5I3 950 aa12.4□□□□□ -0.42
PCDH11Y-207ENST00000622698 TRAPPC10P48553 1259 aa12.4□□□□□ -0.43
PCDH11Y-207ENST00000622698 C3orf67Q6ZVT6 689 aa12.4□□□□□ -0.43
PCDH11Y-207ENST00000622698 OTUD6AQ7L8S5 288 aa12.4□□□□□ -0.43
PCDH11Y-207ENST00000622698 TMEM87AQ8NBN3 555 aa12.4□□□□□ -0.43
PCDH11Y-207ENST00000622698 PCMTD1Q96MG8 357 aaPredicted RBP12.4□□□□□ -0.43
PCDH11Y-207ENST00000622698 TMEM106CQ9BVX2 250 aa12.4□□□□□ -0.43
PCDH11Y-207ENST00000622698 CA12O43570 354 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 FCGRTP55899 365 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 PPATQ06203 517 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 FCHSD1Q86WN1 690 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 NBPF3Q9H094 633 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 USP25Q9UHP3 1055 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 BTAF1O14981 1849 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 GAKO14976 1311 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 GSG1L2A8MUP6 293 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 DESP17661 470 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 ORC2Q13416 577 aaPredicted RBP12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 TXLNBQ8N3L3 684 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 SEC62Q99442 399 aaKnown RBP12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 PRKAG2Q9UGJ0 569 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 PRKAB2O43741 272 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 CETN1Q12798 172 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 MLXIPQ9HAP2 919 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 KDM3BQ7LBC6 1761 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 TBC1D12O60347 775 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 FCER1AP12319 257 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 HOXA7P31268 230 aaPredicted RBP12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 NLGN2Q8NFZ4 835 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 ERO1AQ96HE7 468 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 ACAD9Q9H845 621 aa12.39□□□□□ -0.43
PCDH11Y-207ENST00000622698 SMCO2A6NFE2 343 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 SNAP23O00161 211 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 LAD1O00515 517 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 MYCLP12524 364 aaPredicted RBP12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 FOXD4L6Q3SYB3 417 aaPredicted RBP12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 FOXD4L3Q6VB84 417 aaPredicted RBP12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 NBPF11Q86T75 865 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 CHST13Q8NET6 341 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 VCPKMTQ9H867 229 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 PHLPP2Q6ZVD8 1323 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 SH2B2O14492 632 aaPredicted RBP12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 MAP3K20Q9NYL2 800 aaKnown RBP12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 KDM3AQ9Y4C1 1321 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 SEPT2Q15019 361 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 VGLL2Q8N8G2 317 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 MAF1Q9H063 256 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
PCDH11Y-207ENST00000622698 TMEM88BA6NKF7 163 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 TNPO2O14787 897 aaKnown RBP12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 ZSCAN22P10073 491 aaPredicted RBP12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 CAP2P40123 477 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 CACNB3P54284 484 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 CHMP4BP1P59074 171 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 CDCA5Q96FF9 252 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 TAF1DQ9H5J8 278 aaPredicted RBP12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 DDX19AQ9NUU7 478 aaKnown RBP12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 TSGA10IPQ3SY00 556 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 KRI1Q8N9T8 703 aaKnown RBP12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 NT5C3AQ9H0P0 336 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 NRBP2Q9NSY0 501 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 PFASO15067 1338 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 WNT10BO00744 389 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 USH1GQ495M9 461 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 FERMT2Q96AC1 680 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 WDR11Q9BZH6 1224 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 FZD9O00144 591 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 EEF2P13639 858 aaKnown RBP12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 ZNF280AP59817 542 aaPredicted RBP12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 PPIL2Q13356 520 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 XRRA1Q6P2D8 792 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 CHST3Q7LGC8 479 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 BLIDQ8IZY5 108 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 SLC17A8Q8NDX2 589 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 TEX13BQ9BXU2 312 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 DLG5Q8TDM6 1919 aa12.37□□□□□ -0.43
PCDH11Y-207ENST00000622698 SMTNL1A8MU46 457 aa12.36□□□□□ -0.43
PCDH11Y-207ENST00000622698 PRPF3O43395 683 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms