RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 PIH1D3Q9NQM4 214 aaKnown RBP17.94■□□□□ 0.46
GABRB3-215ENST00000622697 MTUS1Q9ULD2 1270 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 PPP6R2O75170 966 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 MYCLP12524 364 aaPredicted RBP17.94■□□□□ 0.46
GABRB3-215ENST00000622697 USP40Q9NVE5 1235 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 GLI2P10070 1586 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 HGSO14964 777 aaPredicted RBP17.94■□□□□ 0.46
GABRB3-215ENST00000622697 ATP1A3P13637 1013 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 ARHGAP44Q17R89 818 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 FBF1Q8TES7 1133 aa17.94■□□□□ 0.46
GABRB3-215ENST00000622697 ENC1O14682 589 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 SCNN1DP51172 638 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 SNAP23O00161 211 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 CCDC84Q86UT8 332 aaPredicted RBP17.93■□□□□ 0.46
GABRB3-215ENST00000622697 RASSF4Q9H2L5 321 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 GTPBP6O43824 516 aaPredicted RBP17.93■□□□□ 0.46
GABRB3-215ENST00000622697 DAAM2Q86T65 1068 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 TPH2Q8IWU9 490 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 TRIML1Q8N9V2 468 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 SAMSN1Q9NSI8 373 aaKnown RBP17.93■□□□□ 0.46
GABRB3-215ENST00000622697 SH2B2O14492 632 aaPredicted RBP17.93■□□□□ 0.46
GABRB3-215ENST00000622697 CDC25BP30305 580 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 USPL1Q5W0Q7 1092 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 AXIN2Q9Y2T1 843 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 LOC102724428A0A0B4J2F2 783 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 GUCY2FP51841 1108 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 SIK1P57059 783 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 CCDC51Q96ER9 411 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 PGBD1Q96JS3 809 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 STMN4Q9H169 189 aaPredicted RBP17.93■□□□□ 0.46
GABRB3-215ENST00000622697 CHD1O14646 1710 aa17.93■□□□□ 0.46
GABRB3-215ENST00000622697 VIMP08670 466 aaKnown RBP17.92■□□□□ 0.46
GABRB3-215ENST00000622697 RBL2Q08999 1139 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 CTTNBP2NLQ9P2B4 639 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 MAN1B1Q9UKM7 699 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 SOS2Q07890 1332 aaPredicted RBP17.92■□□□□ 0.46
GABRB3-215ENST00000622697 EFCAB8A8MWE9 144 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 EXOC3O60645 756 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 OR52Z1P0C646 297 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 NLRP10Q86W26 655 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 GPBP1Q86WP2 473 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 PCDHB6Q9Y5E3 794 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 MADDQ8WXG6 1647 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 SYNE4Q8N205 404 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 LRRC7Q96NW7 1537 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 CFAP221Q4G0U5 840 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 UTP11Q9Y3A2 253 aaKnown RBP17.92■□□□□ 0.46
GABRB3-215ENST00000622697 TSPOAP1O95153 1857 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 BTDP43251 543 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 COPB1P53618 953 aaKnown RBP17.92■□□□□ 0.46
GABRB3-215ENST00000622697 RPS6KA1Q15418 735 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 FNBP1Q96RU3 617 aa17.92■□□□□ 0.46
GABRB3-215ENST00000622697 PSDA5PKW4 1024 aaPredicted RBP17.91■□□□□ 0.46
GABRB3-215ENST00000622697 NEK8Q86SG6 692 aa17.91■□□□□ 0.46
GABRB3-215ENST00000622697 FOXP1Q9H334 677 aaPredicted RBP17.91■□□□□ 0.46
GABRB3-215ENST00000622697 ARHGEF10LQ9HCE6 1279 aa17.91■□□□□ 0.46
GABRB3-215ENST00000622697 B4DLN1 442 aa17.91■□□□□ 0.46
GABRB3-215ENST00000622697 PRR16Q569H4 304 aa17.91■□□□□ 0.46
GABRB3-215ENST00000622697 TTC16Q8NEE8 873 aa17.91■□□□□ 0.46
GABRB3-215ENST00000622697 H7C1D1 291 aa17.91■□□□□ 0.46
GABRB3-215ENST00000622697 ATP2A1O14983 1001 aa17.91■□□□□ 0.46
GABRB3-215ENST00000622697 DDX41Q9UJV9 622 aaKnown RBP17.91■□□□□ 0.46
GABRB3-215ENST00000622697 STX10O60499 249 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 MMP1P03956 469 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 NF2P35240 595 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 DNM2P50570 870 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 PEX26Q7Z412 305 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 TTC14Q96N46 770 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 MYO1AQ9UBC5 1043 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 DDAH1O94760 285 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 ABCB4P21439 1286 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 DOK7Q18PE1 504 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 MYOCDQ8IZQ8 938 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 SLC35F6Q8N357 371 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 SAMD15Q9P1V8 674 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 PCDHA12Q9UN75 941 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 EPN1Q9Y6I3 576 aaPredicted RBP17.9■□□□□ 0.46
GABRB3-215ENST00000622697 MXRA7P84157 204 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.9■□□□□ 0.46
GABRB3-215ENST00000622697 UNC13BO14795 1591 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 HEG1Q9ULI3 1381 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 MCAMP43121 646 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 ZBTB16Q05516 673 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 TMEM87AQ8NBN3 555 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 JDP2Q8WYK2 163 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 PSTPIP2Q9H939 334 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 CYP27B1O15528 508 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 KIFC2Q96AC6 838 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 EPSTI1Q96J88 318 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 SPHKAPQ2M3C7 1700 aa17.9■□□□□ 0.46
GABRB3-215ENST00000622697 WHAMMP3Q1A5X7 153 aa17.89■□□□□ 0.45
GABRB3-215ENST00000622697 CCDC63Q8NA47 563 aa17.89■□□□□ 0.45
GABRB3-215ENST00000622697 GOLPH3LQ9H4A5 285 aa17.89■□□□□ 0.45
GABRB3-215ENST00000622697 RNF17Q9BXT8 1623 aaKnown RBP17.89■□□□□ 0.45
GABRB3-215ENST00000622697 SOWAHDA6NJG2 315 aa17.89■□□□□ 0.45
GABRB3-215ENST00000622697 CYP2J2P51589 502 aa17.89■□□□□ 0.45
GABRB3-215ENST00000622697 U2AF1L4Q8WU68 220 aaKnown RBP17.89■□□□□ 0.45
GABRB3-215ENST00000622697 SETD1BQ9UPS6 1966 aaKnown RBP17.89■□□□□ 0.45
GABRB3-215ENST00000622697 RASGRF1Q13972 1273 aa17.89■□□□□ 0.45
GABRB3-215ENST00000622697 BRD3Q15059 726 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms