RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 LONP1P36776 959 aaKnown RBP10.71□□□□□ -0.69
PDPN-212ENST00000621990 USP5P45974 858 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 GRIK5Q16478 980 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 BLIDQ8IZY5 108 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 CNBD1Q8NA66 436 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 FEZ1Q99689 392 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 MTRQ99707 1265 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 JAG2Q9Y219 1238 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 FAM205AQ6ZU69 1335 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 IL1R1P14778 569 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 CDK11BP21127 795 aaKnown RBP10.71□□□□□ -0.69
PDPN-212ENST00000621990 AFMP43652 599 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 NAA30Q147X3 362 aaPredicted RBP10.71□□□□□ -0.69
PDPN-212ENST00000621990 SLC35G1Q2M3R5 365 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 SYT10Q6XYQ8 523 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 SLC51AQ86UW1 340 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 BAG1Q99933 345 aaPredicted RBP10.71□□□□□ -0.69
PDPN-212ENST00000621990 USP21Q9UK80 565 aa10.71□□□□□ -0.69
PDPN-212ENST00000621990 SNED1Q8TER0 1413 aa10.71□□□□□ -0.7
PDPN-212ENST00000621990 SPATA31A6Q5VVP1 1343 aa10.71□□□□□ -0.7
PDPN-212ENST00000621990 PALM3A6NDB9 673 aaPredicted RBP10.71□□□□□ -0.7
PDPN-212ENST00000621990 ZSCAN12O43309 604 aa10.71□□□□□ -0.7
PDPN-212ENST00000621990 LDHCP07864 332 aa10.71□□□□□ -0.7
PDPN-212ENST00000621990 PRR5LQ6MZQ0 368 aa10.71□□□□□ -0.7
PDPN-212ENST00000621990 TYW1BQ6NUM6 668 aa10.71□□□□□ -0.7
PDPN-212ENST00000621990 STAG2Q8N3U4 1231 aa10.71□□□□□ -0.7
PDPN-212ENST00000621990 DYNLL2Q96FJ2 89 aa10.71□□□□□ -0.7
PDPN-212ENST00000621990 PANX2Q96RD6 677 aa10.71□□□□□ -0.7
PDPN-212ENST00000621990 ADD3Q9UEY8 706 aaKnown RBP10.71□□□□□ -0.7
PDPN-212ENST00000621990 GPR75-ASB3A0A0A6YYF3 556 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 GOLGA6L9A6NEM1 432 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 LRRC10BA6NIK2 292 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 GTPBP6O43824 516 aaPredicted RBP10.7□□□□□ -0.7
PDPN-212ENST00000621990 RASA1P20936 1047 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 NOVP48745 357 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 DIXDC1Q155Q3 683 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 AMOTL1Q8IY63 956 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 FAM163AQ96GL9 167 aaPredicted RBP10.7□□□□□ -0.7
PDPN-212ENST00000621990 CTAGE1Q96RT6 745 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 LZTS2Q9BRK4 669 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 BARHL2Q9NY43 387 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 PPP2R2CQ9Y2T4 447 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 FANCGO15287 622 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 CYTH3O43739 400 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 ONECUT3O60422 494 aaPredicted RBP10.7□□□□□ -0.7
PDPN-212ENST00000621990 CASP1P29466 404 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 MCM7P33993 719 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 GPSM2P81274 684 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 GOLGA8FQ08AF8 430 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 GOLGA8DPQ0D2H9 430 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 HSP90AA4PQ58FG1 418 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 FAM196AQ6ZSG2 479 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 C16orf86Q6ZW13 317 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 MKNK2Q9HBH9 465 aa10.7□□□□□ -0.7
PDPN-212ENST00000621990 ITIH6Q6UXX5 1313 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 MYH1P12882 1939 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 USP17L3A6NCW0 530 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 USP17L4A6NCW7 530 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 STXBP3O00186 592 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 LAD1O00515 517 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 TSPY3P0CV98 308 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 TSPY8P0CW00 308 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 SEMA3FQ13275 785 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 PTPN21Q16825 1174 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 WWC2Q6AWC2 1192 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 USP17L1Q7RTZ2 530 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 CCDC148Q8NFR7 591 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 GPKOWQ92917 476 aaPredicted RBP eCLIP10.69□□□□□ -0.7
PDPN-212ENST00000621990 SPZ1Q9BXG8 430 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 ZNF287Q9HBT7 754 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 PODXL2Q9NZ53 605 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 RWDD2AQ9UIY3 292 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 PCDHA6Q9UN73 950 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 PCDHA8Q9Y5H6 950 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 FECHP22830 423 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 ATP2B4P23634 1241 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 TGFBRAP1Q8WUH2 860 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 TMEM47Q9BQJ4 181 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 CD209Q9NNX6 404 aa10.69□□□□□ -0.7
PDPN-212ENST00000621990 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.69□□□□□ -0.7
PDPN-212ENST00000621990 GAKO14976 1311 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 QSER1Q2KHR3 1735 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 NPHP1O15259 732 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 MYL1P05976 194 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 SMARCA1P28370 1054 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 PRPHP41219 470 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 FAM182BQ5T319 152 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 ZNF658Q5TYW1 1059 aaPredicted RBP10.68□□□□□ -0.7
PDPN-212ENST00000621990 SMAP1Q8IYB5 467 aaPredicted RBP10.68□□□□□ -0.7
PDPN-212ENST00000621990 SMYD4Q8IYR2 804 aaPredicted RBP10.68□□□□□ -0.7
PDPN-212ENST00000621990 ZNF444Q8N0Y2 327 aaPredicted RBP10.68□□□□□ -0.7
PDPN-212ENST00000621990 ZNF397Q8NF99 534 aaPredicted RBP10.68□□□□□ -0.7
PDPN-212ENST00000621990 NAA15Q9BXJ9 866 aaKnown RBP10.68□□□□□ -0.7
PDPN-212ENST00000621990 LRRC4BQ9NT99 713 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 RMND1Q9NWS8 449 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 LIMA1Q9UHB6 759 aaKnown RBP10.68□□□□□ -0.7
PDPN-212ENST00000621990 TULP1O00294 542 aaPredicted RBP10.68□□□□□ -0.7
PDPN-212ENST00000621990 TEX33O43247 280 aa10.68□□□□□ -0.7
PDPN-212ENST00000621990 HOXA10P31260 410 aaPredicted RBP10.68□□□□□ -0.7
PDPN-212ENST00000621990 ADKP55263 362 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms