RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 CIAPIN1Q6FI81 312 aa12.08□□□□□ -0.48
VPS11-208ENST00000621676 C11orf57Q6ZUT1 292 aaPredicted RBP12.08□□□□□ -0.48
VPS11-208ENST00000621676 ARID3AQ99856 593 aa12.08□□□□□ -0.48
VPS11-208ENST00000621676 SH2D3AQ9BRG2 576 aa12.08□□□□□ -0.48
VPS11-208ENST00000621676 CSRNP2Q9H175 543 aa12.08□□□□□ -0.48
VPS11-208ENST00000621676 CNOT7Q9UIV1 285 aaKnown RBP12.08□□□□□ -0.48
VPS11-208ENST00000621676 CCNT1O60563 726 aaKnown RBP12.07□□□□□ -0.48
VPS11-208ENST00000621676 TXKP42681 527 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 ABCB5Q2M3G0 1257 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 CNNM3Q8NE01 707 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 TRIM5Q9C035 493 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 ZHX3Q9H4I2 956 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 MAD2L2Q9UI95 211 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 CHD4Q14839 1912 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 CICQ96RK0 1608 aaPredicted RBP12.07□□□□□ -0.48
VPS11-208ENST00000621676 LMOD1P29536 600 aaPredicted RBP12.07□□□□□ -0.48
VPS11-208ENST00000621676 KIF5BP33176 963 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 KRT2P35908 639 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 ZNF165P49910 485 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 CSPP1Q1MSJ5 1256 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 STYK1Q6J9G0 422 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 MTMR4Q9NYA4 1195 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 SALL1Q9NSC2 1324 aa12.07□□□□□ -0.48
VPS11-208ENST00000621676 A0A1W2PRG0 241 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 INPP5BP32019 993 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 NBPF12Q5TAG4 269 aaPredicted RBP12.06□□□□□ -0.48
VPS11-208ENST00000621676 RSBN1LQ6PCB5 846 aaPredicted RBP12.06□□□□□ -0.48
VPS11-208ENST00000621676 MRPS27Q92552 414 aaKnown RBP12.06□□□□□ -0.48
VPS11-208ENST00000621676 MTFR1LQ9H019 292 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 SLX4Q8IY92 1834 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 CFBP00751 764 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 SLFN13Q68D06 897 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 SHC4Q6S5L8 630 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 ZNF70Q9UC06 446 aaPredicted RBP12.06□□□□□ -0.48
VPS11-208ENST00000621676 SERTAD1Q9UHV2 236 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 ZNRF3Q9ULT6 936 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 ADCY5O95622 1261 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 PPP4CP60510 307 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 GOLGA8FQ08AF8 430 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 GOLGA8DPQ0D2H9 430 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 ANGEL2Q5VTE6 544 aaKnown RBP12.06□□□□□ -0.48
VPS11-208ENST00000621676 PURBQ96QR8 312 aaKnown RBP12.06□□□□□ -0.48
VPS11-208ENST00000621676 RNF181Q9P0P0 153 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 PI4KBQ9UBF8 816 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 HDAC9Q9UKV0 1011 aa12.06□□□□□ -0.48
VPS11-208ENST00000621676 F5H6K3 240 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 AP5Z1O43299 807 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 CACNB1Q02641 598 aaPredicted RBP12.05□□□□□ -0.48
VPS11-208ENST00000621676 KLRC3Q07444 240 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 PLS1Q14651 629 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 DPCR1Q3MIW9 517 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 CC2D2BQ6DHV5 1058 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 C16orf86Q6ZW13 317 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 ILDR2Q71H61 639 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 AOPEPQ8N6M6 819 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 BRMS1Q9HCU9 246 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 CLEC11AQ9Y240 323 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 DDX39AO00148 427 aaKnown RBP12.05□□□□□ -0.48
VPS11-208ENST00000621676 CCDC192P0DO97 292 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 PDHBP11177 359 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 TECP42680 631 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 KARSQ15046 597 aaKnown RBP12.05□□□□□ -0.48
VPS11-208ENST00000621676 FAM83BQ5T0W9 1011 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 WDR78Q5VTH9 848 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 ADGRF4Q8IZF3 695 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 CNKSR2Q8WXI2 1034 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 NRBP1Q9UHY1 535 aa12.05□□□□□ -0.48
VPS11-208ENST00000621676 MYO1BO43795 1136 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 PRR29P0C7W0 189 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 RTKN2Q8IZC4 609 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 HPS3Q969F9 1004 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 TMEM60Q9H2L4 133 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 ZNF287Q9HBT7 754 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 SBF2Q86WG5 1849 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 CHMP2AO43633 222 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 KIAA1755Q5JYT7 1200 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 TRPM4Q8TD43 1214 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 RRP36Q96EU6 259 aaKnown RBP12.04□□□□□ -0.48
VPS11-208ENST00000621676 RTEL1Q9NZ71 1219 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 RCOR1Q9UKL0 485 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 CNTNAP5Q8WYK1 1306 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 FSD2A1L4K1 749 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 TTLL1O95922 423 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 TTC38Q5R3I4 469 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 NEDD1Q8NHV4 660 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 ANAPC4Q9UJX5 808 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 KCNH3Q9ULD8 1083 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 ZBTB21Q9ULJ3 1066 aa12.04□□□□□ -0.48
VPS11-208ENST00000621676 NHSQ6T4R5 1651 aa12.03□□□□□ -0.48
VPS11-208ENST00000621676 GOLGA6L19H0YKK7 550 aa12.03□□□□□ -0.48
VPS11-208ENST00000621676 ORC4O43929 436 aa12.03□□□□□ -0.48
VPS11-208ENST00000621676 ARID5BQ14865 1188 aa12.03□□□□□ -0.48
VPS11-208ENST00000621676 ZNF341Q9BYN7 854 aa12.03□□□□□ -0.48
VPS11-208ENST00000621676 ALDH8A1Q9H2A2 487 aaPredicted RBP12.03□□□□□ -0.48
VPS11-208ENST00000621676 MYOZ2Q9NPC6 264 aa12.03□□□□□ -0.48
VPS11-208ENST00000621676 RRAGDQ9NQL2 400 aaPredicted RBP12.03□□□□□ -0.48
VPS11-208ENST00000621676 PCDHA1Q9Y5I3 950 aa12.03□□□□□ -0.48
VPS11-208ENST00000621676 ZNF541Q9H0D2 1346 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms