RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 IFIT1BQ5T764 474 aaKnown RBP21.81■■□□□ 1.08
CIRBP-245ENST00000621399 ZNF296Q8WUU4 475 aaPredicted RBP21.81■■□□□ 1.08
CIRBP-245ENST00000621399 HOXC10Q9NYD6 342 aa21.81■■□□□ 1.08
CIRBP-245ENST00000621399 SEC24BO95487 1268 aa21.8■■□□□ 1.08
CIRBP-245ENST00000621399 SP3Q02447 781 aa21.8■■□□□ 1.08
CIRBP-245ENST00000621399 SEC23AQ15436 765 aa21.8■■□□□ 1.08
CIRBP-245ENST00000621399 TMEM67Q5HYA8 995 aa21.8■■□□□ 1.08
CIRBP-245ENST00000621399 SAMD1Q6SPF0 538 aaPredicted RBP21.8■■□□□ 1.08
CIRBP-245ENST00000621399 ANKRD13CQ8N6S4 541 aa21.8■■□□□ 1.08
CIRBP-245ENST00000621399 GTF3C2Q8WUA4 911 aaPredicted RBP21.8■■□□□ 1.08
CIRBP-245ENST00000621399 WTAPQ15007 396 aa21.79■■□□□ 1.08
CIRBP-245ENST00000621399 PNMA1Q8ND90 353 aa21.79■■□□□ 1.08
CIRBP-245ENST00000621399 DCAF4Q8WV16 495 aa21.79■■□□□ 1.08
CIRBP-245ENST00000621399 JAKMIP1Q96N16 626 aaKnown RBP21.79■■□□□ 1.08
CIRBP-245ENST00000621399 SPDYE16A6NNV3 312 aaPredicted RBP21.78■■□□□ 1.08
CIRBP-245ENST00000621399 HMGB1P09429 215 aaKnown RBP21.78■■□□□ 1.08
CIRBP-245ENST00000621399 BCRP11274 1271 aa21.78■■□□□ 1.08
CIRBP-245ENST00000621399 DSG3P32926 999 aa21.78■■□□□ 1.08
CIRBP-245ENST00000621399 COL9A3Q14050 684 aaPredicted RBP21.78■■□□□ 1.08
CIRBP-245ENST00000621399 CCDC96Q2M329 555 aa21.78■■□□□ 1.08
CIRBP-245ENST00000621399 DHX32Q7L7V1 743 aaKnown RBP21.78■■□□□ 1.08
CIRBP-245ENST00000621399 IGDCC4Q8TDY8 1250 aa21.78■■□□□ 1.08
CIRBP-245ENST00000621399 MTA3Q9BTC8 594 aa21.78■■□□□ 1.08
CIRBP-245ENST00000621399 PRDM10Q9NQV6 1147 aa21.78■■□□□ 1.08
CIRBP-245ENST00000621399 FBXO28Q9NVF7 368 aa21.78■■□□□ 1.08
CIRBP-245ENST00000621399 FEM1BQ9UK73 627 aa21.78■■□□□ 1.08
CIRBP-245ENST00000621399 TMEM232C9JQI7 657 aa21.77■■□□□ 1.08
CIRBP-245ENST00000621399 KCTD1Q719H9 257 aa21.77■■□□□ 1.08
CIRBP-245ENST00000621399 RASGRP2Q7LDG7 609 aa21.77■■□□□ 1.08
CIRBP-245ENST00000621399 TMEM87BQ96K49 555 aa21.77■■□□□ 1.08
CIRBP-245ENST00000621399 SLF1Q9BQI6 1058 aa21.77■■□□□ 1.08
CIRBP-245ENST00000621399 PAGR1Q9BTK6 254 aa21.77■■□□□ 1.08
CIRBP-245ENST00000621399 RBPJLQ9UBG7 517 aa21.77■■□□□ 1.08
CIRBP-245ENST00000621399 PDHBP11177 359 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 PSMA5P28066 241 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 IKQ13123 557 aaPredicted RBP21.76■■□□□ 1.07
CIRBP-245ENST00000621399 FAM110CQ1W6H9 321 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 LBX2Q6XYB7 198 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 PRPF38AQ8NAV1 312 aaKnown RBP21.76■■□□□ 1.07
CIRBP-245ENST00000621399 GPRC5AQ8NFJ5 357 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 ATG4CQ96DT6 458 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 ERO1AQ96HE7 468 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 LRRC2Q9BYS8 371 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 PPP1R9AQ9ULJ8 1098 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 RABGAP1Q9Y3P9 1069 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 MYH4Q9Y623 1939 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 MYPNQ86TC9 1320 aa21.76■■□□□ 1.07
CIRBP-245ENST00000621399 SH2B2O14492 632 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-245ENST00000621399 PEX10O60683 326 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 ECM2O94769 699 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-245ENST00000621399 STAT2P52630 851 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 EXOSC10Q01780 885 aaKnown RBP21.75■■□□□ 1.07
CIRBP-245ENST00000621399 KIF22Q14807 665 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 BLOC1S2Q6QNY1 142 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 POTEEQ6S8J3 1075 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 TMTC2Q8N394 836 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 CD99L2Q8TCZ2 262 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 CHURC1Q8WUH1 139 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 KIFC2Q96AC6 838 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 LY9Q9HBG7 655 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 SENP2Q9HC62 589 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 TXNRD2Q9NNW7 524 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 GPCPD1Q9NPB8 672 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 GPHNQ9NQX3 736 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-245ENST00000621399 MORF4L1Q9UBU8 362 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 FRMPD2Q68DX3 1309 aaPredicted RBP21.75■■□□□ 1.07
CIRBP-245ENST00000621399 WDR19Q8NEZ3 1342 aa21.75■■□□□ 1.07
CIRBP-245ENST00000621399 SNHG28P0DPA3 235 aa21.74■■□□□ 1.07
CIRBP-245ENST00000621399 LACTBP83111 547 aaPredicted RBP21.74■■□□□ 1.07
CIRBP-245ENST00000621399 NFXL1Q6ZNB6 911 aa21.74■■□□□ 1.07
CIRBP-245ENST00000621399 CATIPQ7Z7H3 387 aa21.74■■□□□ 1.07
CIRBP-245ENST00000621399 FAM160B2Q86V87 743 aa21.74■■□□□ 1.07
CIRBP-245ENST00000621399 MB21D1Q8N884 522 aa21.74■■□□□ 1.07
CIRBP-245ENST00000621399 TCEANC2Q96MN5 208 aa21.74■■□□□ 1.07
CIRBP-245ENST00000621399 CNMDO75829 334 aa21.73■■□□□ 1.07
CIRBP-245ENST00000621399 CPA1P15085 419 aa21.73■■□□□ 1.07
CIRBP-245ENST00000621399 CASTP20810 708 aaKnown RBP21.73■■□□□ 1.07
CIRBP-245ENST00000621399 ERVK-9P63128 1117 aa21.73■■□□□ 1.07
CIRBP-245ENST00000621399 ERVK-24P63145 666 aa21.73■■□□□ 1.07
CIRBP-245ENST00000621399 ZNF543Q08ER8 600 aa21.73■■□□□ 1.07
CIRBP-245ENST00000621399 BTBD7Q9P203 1132 aa21.73■■□□□ 1.07
CIRBP-245ENST00000621399 ADAMTS5Q9UNA0 930 aa21.73■■□□□ 1.07
CIRBP-245ENST00000621399 CCDC69A6NI79 296 aa21.72■■□□□ 1.07
CIRBP-245ENST00000621399 VWA5AO00534 786 aa21.72■■□□□ 1.07
CIRBP-245ENST00000621399 PLA2G6O60733 806 aa21.72■■□□□ 1.07
CIRBP-245ENST00000621399 GOLGA8HP0CJ92 632 aa21.72■■□□□ 1.07
CIRBP-245ENST00000621399 LIFRP42702 1097 aa21.72■■□□□ 1.07
CIRBP-245ENST00000621399 FGD1P98174 961 aa21.72■■□□□ 1.07
CIRBP-245ENST00000621399 ARHGEF6Q15052 776 aa21.72■■□□□ 1.07
CIRBP-245ENST00000621399 Q3C1V9 767 aa21.72■■□□□ 1.07
CIRBP-245ENST00000621399 GPATCH4Q5T3I0 446 aaKnown RBP21.72■■□□□ 1.07
CIRBP-245ENST00000621399 TTBK2Q6IQ55 1244 aa21.72■■□□□ 1.07
CIRBP-245ENST00000621399 CTDP1Q9Y5B0 961 aaPredicted RBP21.72■■□□□ 1.07
CIRBP-245ENST00000621399 ZBED4O75132 1171 aa21.71■■□□□ 1.07
CIRBP-245ENST00000621399 FMNL1O95466 1100 aaPredicted RBP21.71■■□□□ 1.07
CIRBP-245ENST00000621399 PARP1P09874 1014 aaKnown RBP21.71■■□□□ 1.07
CIRBP-245ENST00000621399 RPS6KB1P23443 525 aa21.71■■□□□ 1.07
CIRBP-245ENST00000621399 SLC16A2P36021 539 aa21.71■■□□□ 1.07
CIRBP-245ENST00000621399 PSMC4P43686 418 aa21.71■■□□□ 1.07
CIRBP-245ENST00000621399 ANAPC15P60006 121 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms