RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 GUCY2CP25092 1073 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 EEF1DP29692 281 aaKnown RBP10.89□□□□□ -0.67
COL4A6-210ENST00000621266 PALM2Q8IXS6 379 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 KRT12Q99456 494 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 PARP2Q9UGN5 583 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 KRT3P12035 628 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 HNRNPH2P55795 449 aaKnown RBP10.89□□□□□ -0.67
COL4A6-210ENST00000621266 KCNQ4P56696 695 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 BIRC3Q13489 604 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 LIN9Q5TKA1 542 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 PALMDQ9NP74 551 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 TMOD4Q9NZQ9 345 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 EDC4Q6P2E9 1401 aaKnown RBP10.89□□□□□ -0.67
COL4A6-210ENST00000621266 TTC41PQ6P2S7 1318 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 MAGEB6P1A0A0J9YX57 407 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 ANKRD65E5RJM6 399 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 STX10O60499 249 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 WDR44Q5JSH3 913 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 KRT27Q7Z3Y8 459 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 CCDC89Q8N998 374 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 LRGUKQ96M69 825 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 IWS1Q96ST2 819 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 TMEM63CQ9P1W3 806 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 NFE2L3Q9Y4A8 694 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 KCNK3O14649 394 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 DAPK3O43293 454 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 BUB1O43683 1085 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 BSPRYQ5W0U4 402 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 ADAT2Q7Z6V5 191 aaKnown RBP10.89□□□□□ -0.67
COL4A6-210ENST00000621266 SYCE1Q8N0S2 351 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 COL17A1Q9UMD9 1497 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-210ENST00000621266 LOC102724159A0A0B4J2E5 919 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 PWP2Q15269 919 aaKnown RBP10.89□□□□□ -0.67
COL4A6-210ENST00000621266 CCDC92Q53HC0 331 aaPredicted RBP10.89□□□□□ -0.67
COL4A6-210ENST00000621266 SLC9C2Q5TAH2 1124 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 PPP2R2CQ9Y2T4 447 aa10.89□□□□□ -0.67
COL4A6-210ENST00000621266 SBNO1A3KN83 1393 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 MAP3K7O43318 606 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 ESRRGP62508 458 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 ANKRD20A4Q4UJ75 823 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 ANKRD20A8PQ5CZ79 823 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 ANKRD20A2Q5SQ80 823 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 ANKRD20A1Q5TYW2 823 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 GRAMD4Q6IC98 578 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 C2CD5Q86YS7 1000 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 HAUS8Q9BT25 410 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 PA2G4Q9UQ80 394 aaKnown RBP10.88□□□□□ -0.67
COL4A6-210ENST00000621266 KRIT1O00522 736 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 PPIP5K2O43314 1243 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 SUN1O94901 812 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 ZNF202O95125 648 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 HARSP12081 509 aaKnown RBP10.88□□□□□ -0.67
COL4A6-210ENST00000621266 CALML3P27482 149 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 KLHL30Q0D2K2 578 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 CWF19L2Q2TBE0 894 aaKnown RBP10.88□□□□□ -0.67
COL4A6-210ENST00000621266 ANO1Q5XXA6 986 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 JADE1Q6IE81 842 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 MAGEB6Q8N7X4 407 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 P3H4Q92791 437 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 KDM6BO15054 1643 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 SYF2O95926 243 aaKnown RBP10.88□□□□□ -0.67
COL4A6-210ENST00000621266 TCP10Q12799 353 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 LRRC8CQ8TDW0 803 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 SDCCAG3Q96C92 435 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 RRP36Q96EU6 259 aaKnown RBP10.88□□□□□ -0.67
COL4A6-210ENST00000621266 STK10O94804 968 aaKnown RBP10.88□□□□□ -0.67
COL4A6-210ENST00000621266 KRT24Q2M2I5 525 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 SRGAP1Q7Z6B7 1085 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 PYCARDQ9ULZ3 195 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 NUB1Q9Y5A7 615 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 EIF4E1BA6NMX2 242 aaKnown RBP10.88□□□□□ -0.67
COL4A6-210ENST00000621266 MMEL1Q495T6 779 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 CEP85Q6P2H3 762 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 CNNM4Q6P4Q7 775 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 NELFBQ8WX92 580 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 SAAL1Q96ER3 474 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 PAG1Q9NWQ8 432 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 BABAM1Q9NWV8 329 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 RTL9Q8NET4 1388 aa10.88□□□□□ -0.67
COL4A6-210ENST00000621266 GABPAQ06546 454 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 ADCY1Q08828 1119 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 ICE2Q659A1 982 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 DCTPP1Q9H773 170 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 GGA1Q9UJY5 639 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 PER1O15534 1290 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-210ENST00000621266 LDHBP07195 334 aaKnown RBP10.87□□□□□ -0.67
COL4A6-210ENST00000621266 SFMBT2Q5VUG0 894 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 RRAGAQ7L523 313 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 CENPKQ9BS16 269 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 EIF2AQ9BY44 585 aaKnown RBP10.87□□□□□ -0.67
COL4A6-210ENST00000621266 ZMYND10O75800 440 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 LETM2Q2VYF4 491 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 LRRC8AQ8IWT6 810 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 USP6NLQ92738 828 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 RNF34Q969K3 372 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 RPGRIP1Q96KN7 1286 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 TBC1D7Q9P0N9 293 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 SCHIP1Q9P0W5 487 aaPredicted RBP10.87□□□□□ -0.67
COL4A6-210ENST00000621266 NPC1L1Q9UHC9 1359 aa10.87□□□□□ -0.67
COL4A6-210ENST00000621266 PCYT1AP49585 367 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms