RNA–Protein interactions for RNA: ENST00000621217.4

GGA3-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 4,181 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-222ENST00000621217 MATR3P43243 847 aaKnown RBP eCLIP10.21□□□□□ -0.77
GGA3-222ENST00000621217 IQCEQ6IPM2 695 aa10.21□□□□□ -0.77
GGA3-222ENST00000621217 USP49Q70CQ1 688 aa10.21□□□□□ -0.77
GGA3-222ENST00000621217 MIGA2Q7L4E1 593 aa10.21□□□□□ -0.77
GGA3-222ENST00000621217 LRP10Q7Z4F1 713 aa10.21□□□□□ -0.77
GGA3-222ENST00000621217 SYMPKQ92797 1274 aaKnown RBP10.21□□□□□ -0.77
GGA3-222ENST00000621217 EPB41L4AQ9HCS5 686 aaPredicted RBP10.21□□□□□ -0.77
GGA3-222ENST00000621217 ARPP21Q9UBL0 812 aaPredicted RBP10.21□□□□□ -0.77
GGA3-222ENST00000621217 PSDA5PKW4 1024 aaPredicted RBP10.21□□□□□ -0.78
GGA3-222ENST00000621217 GNAQP50148 359 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 UBXN1Q04323 297 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 GRIN1Q05586 938 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 TICAM2Q86XR7 235 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 IQUBQ8NA54 791 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 KCNB2Q92953 911 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 MRFAP1L1Q96HT8 127 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 A0A1W2PQ27 194 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 A0A1W2PQ64 194 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 A0A1W2PQD8 194 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 TRIM21P19474 475 aaKnown RBP10.21□□□□□ -0.78
GGA3-222ENST00000621217 SNAP25P60880 206 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 GRM1Q13255 1194 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 PLS1Q14651 629 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 INF2Q27J81 1249 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 DTHD1Q6ZMT9 781 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 MICALL1Q8N3F8 863 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 TBC1D22AQ8WUA7 517 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 DCP1AQ9NPI6 582 aaPredicted RBP10.21□□□□□ -0.78
GGA3-222ENST00000621217 BMP2KQ9NSY1 1161 aaPredicted RBP10.21□□□□□ -0.78
GGA3-222ENST00000621217 ZBTB21Q9ULJ3 1066 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 GUCA1BQ9UMX6 200 aa10.21□□□□□ -0.78
GGA3-222ENST00000621217 CCNT1O60563 726 aaKnown RBP10.2□□□□□ -0.78
GGA3-222ENST00000621217 TUBB4AP04350 444 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 DLGAP5Q15398 846 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 AOC3Q16853 763 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 ZNF569Q5MCW4 686 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 KCTD1Q719H9 257 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 HINFPQ9BQA5 517 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 MMP1P03956 469 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 ARID5AQ03989 594 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 SHC4Q6S5L8 630 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 C6orf50Q9HD87 102 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 LRRC4BQ9NT99 713 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 MED1Q15648 1581 aaPredicted RBP10.2□□□□□ -0.78
GGA3-222ENST00000621217 FMNL1O95466 1100 aaPredicted RBP10.2□□□□□ -0.78
GGA3-222ENST00000621217 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 SSR1P43307 286 aaKnown RBP10.2□□□□□ -0.78
GGA3-222ENST00000621217 MCM6Q14566 821 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 RNF187Q5TA31 235 aaPredicted RBP10.2□□□□□ -0.78
GGA3-222ENST00000621217 CCDC148Q8NFR7 591 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 SRRTQ9BXP5 876 aaKnown RBP10.2□□□□□ -0.78
GGA3-222ENST00000621217 MYO6Q9UM54 1294 aa10.2□□□□□ -0.78
GGA3-222ENST00000621217 SPATA31A6Q5VVP1 1343 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 SYNRGQ9UMZ2 1314 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 CHD2O14647 1828 aaKnown RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 RHOXF2BP0C7M4 288 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 IFNAR1P17181 557 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 SF3B3Q15393 1217 aaKnown RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 ZRSR2Q15696 482 aaKnown RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 TMEM266Q2M3C6 531 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 DHX40Q8IX18 779 aaKnown RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 DPF2Q92785 391 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 CAPZA3Q96KX2 299 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 RHOXF2Q9BQY4 288 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 FUCA2Q9BTY2 467 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 TDRD3Q9H7E2 651 aaKnown RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 ATP8A2Q9NTI2 1148 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 GOLGA6L9A6NEM1 432 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 HMGB2P26583 209 aaKnown RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 IQCB1Q15051 598 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 EZH2Q15910 746 aaKnown RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 TDRD12Q587J7 1177 aaKnown RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 FKBP15Q5T1M5 1219 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 DYMQ7RTS9 669 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 ADGRA1Q86SQ6 560 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 CUL5Q93034 780 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 CHMP2AO43633 222 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 GYS1P13807 737 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 CALML3P27482 149 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 ENAHQ8N8S7 591 aaPredicted RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 ERO1AQ96HE7 468 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 MYCBPQ99417 103 aaPredicted RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 EXOC1Q9NV70 894 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 XRN1Q8IZH2 1706 aaKnown RBP10.19□□□□□ -0.78
GGA3-222ENST00000621217 ABCC12Q96J65 1359 aa10.19□□□□□ -0.78
GGA3-222ENST00000621217 CCDC174Q6PII3 467 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 PLA2G4DQ86XP0 818 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 DHX37Q8IY37 1157 aaKnown RBP10.18□□□□□ -0.78
GGA3-222ENST00000621217 COA7Q96BR5 231 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 NSUN4Q96CB9 384 aaKnown RBP10.18□□□□□ -0.78
GGA3-222ENST00000621217 CALML4Q96GE6 196 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 MMRN2Q9H8L6 949 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 ZNF408Q9H9D4 720 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 ZNF277Q9NRM2 450 aaPredicted RBP10.18□□□□□ -0.78
GGA3-222ENST00000621217 RBM28Q9NW13 759 aaKnown RBP10.18□□□□□ -0.78
GGA3-222ENST00000621217 RGPD2P0DJD1 1756 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 MROH7-TTC4A0A0A0MT08 1334 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 SMCO2A6NFE2 343 aa10.18□□□□□ -0.78
GGA3-222ENST00000621217 ODF2Q5BJF6 829 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms