RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 CTAGE15A4D2H0 777 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 CBFA2T2O43439 604 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 CTAGE8P0CG41 777 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 ADD1P35611 737 aaKnown RBP17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 NDUFA8P51970 172 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 RPS8P62241 208 aaKnown RBP17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 ZNF569Q5MCW4 686 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 CTAGE6Q86UF2 777 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 CTAGE4Q8IX94 777 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 THSD7AQ9UPZ6 1657 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 GOLGA6CA6NDK9 693 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 PRC1O43663 620 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 SLC3A2P08195 630 aaKnown RBP17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 GOLGA6DP0CG33 693 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 GGCXP38435 758 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 IRAK4Q9NWZ3 460 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 GOLGA6AQ9NYA3 693 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 SHOX2O60902 331 aaPredicted RBP17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 TBC1D10CQ8IV04 446 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 FMR1NBQ8N0W7 255 aaPredicted RBP17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 STRBPQ96SI9 672 aaKnown RBP17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 CAPS2Q9BXY5 557 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 HPCAL4Q9UM19 191 aa17.81■□□□□ 0.44
SEMA3B-214ENST00000619119 A0A1B0GUA9 196 aa17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 SSBP05455 408 aaKnown RBP eCLIP17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 NBPF9Q3BBW0 867 aa17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 ZNF483Q8TF39 744 aaPredicted RBP17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 AP1G2O75843 785 aa17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 STIM1Q13586 685 aa17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 NFIXQ14938 502 aa17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 LCORLQ8N3X6 602 aa17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 NCOA7Q8NI08 942 aa17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 BPIFA3Q9BQP9 254 aa17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 NBPF3Q9H094 633 aa17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 KLC4Q9NSK0 619 aa17.8■□□□□ 0.44
SEMA3B-214ENST00000619119 BCORQ6W2J9 1755 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 RBM5P52756 815 aaKnown RBP eCLIP17.79■□□□□ 0.443e-6■■□□□ 12.7
SEMA3B-214ENST00000619119 NLRP12P59046 1061 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 E2F5Q15329 346 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 RNF187Q5TA31 235 aaPredicted RBP17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 CRACR2AQ9BSW2 395 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 NDUFAB1O14561 156 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 KIF5CO60282 957 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 PDIA3P30101 505 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 AARSP49588 968 aaKnown RBP eCLIP17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 CAVIN4Q5BKX8 364 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 SLC10A5Q5PT55 438 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 GSPT2Q8IYD1 628 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 BORCS6Q96GS4 357 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 HSD3B7Q9H2F3 369 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 KIF9Q9HAQ2 790 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 ETAA1Q9NY74 926 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 PFKFB2O60825 505 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 RPSAP08865 295 aaKnown RBP17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 CTDSPL2Q05D32 466 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 AMOTL1Q8IY63 956 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 NAPBQ9H115 298 aa17.79■□□□□ 0.44
SEMA3B-214ENST00000619119 CICQ96RK0 1608 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 B4E1Z4 1266 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 EIF3HO15372 352 aaKnown RBP eCLIP17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 ONECUT3O60422 494 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 CAND2O75155 1236 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 ANTXR2P58335 489 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 ZKSCAN8Q15776 578 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 ADGRA1Q86SQ6 560 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 EPB41L4AQ9HCS5 686 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 PCDHA7Q9UN72 937 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 LAMA4Q16363 1823 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 PTPDC1A2A3K4 754 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 CTDNEP1O95476 244 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 RXRAP19793 462 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 CYP7A1P22680 504 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 SF3A1Q15459 793 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 MB21D2Q8IYB1 491 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 THOC1Q96FV9 657 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 FAM84BQ96KN1 310 aaPredicted RBP17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 SPATS2LQ9NUQ6 558 aaKnown RBP17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 MYH7P12883 1935 aa17.78■□□□□ 0.44
SEMA3B-214ENST00000619119 KLF18A0A0U1RQI7 1052 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 ZMYND10O75800 440 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 CCDC175P0C221 793 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 IFNL3Q8IZI9 196 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 NSUN7Q8NE18 718 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 CPSF2Q9P2I0 782 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 SLC4A4Q9Y6R1 1079 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 NHSQ6T4R5 1651 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 ATRNO75882 1429 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 SOWAHDA6NJG2 315 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 RTN2O75298 545 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 FSBPO95073 299 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 PDHBP11177 359 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 MRPL12P52815 198 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 GRIK3Q13003 919 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 RRP12Q5JTH9 1297 aaKnown RBP17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 ARMC2Q8NEN0 867 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 SCLT1Q96NL6 688 aa17.77■□□□□ 0.44
SEMA3B-214ENST00000619119 STX10O60499 249 aa17.77■□□□□ 0.43
SEMA3B-214ENST00000619119 PPFIA1Q13136 1202 aa17.77■□□□□ 0.43
SEMA3B-214ENST00000619119 UBE4AQ14139 1066 aa17.77■□□□□ 0.43
SEMA3B-214ENST00000619119 KRT27Q7Z3Y8 459 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms