RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 PEX10O60683 326 aa9.76□□□□□ -0.85
NEK3-209ENST00000618856 PLA2G6O60733 806 aa9.76□□□□□ -0.85
NEK3-209ENST00000618856 IGHA2P01877 340 aa9.76□□□□□ -0.85
NEK3-209ENST00000618856 CYP21A2P08686 494 aa9.76□□□□□ -0.85
NEK3-209ENST00000618856 HOXD10P28358 340 aa9.76□□□□□ -0.85
NEK3-209ENST00000618856 IMMTQ16891 758 aaKnown RBP9.76□□□□□ -0.85
NEK3-209ENST00000618856 SPICE1Q8N0Z3 855 aa9.76□□□□□ -0.85
NEK3-209ENST00000618856 MB21D1Q8N884 522 aa9.76□□□□□ -0.85
NEK3-209ENST00000618856 PPP1R9AQ9ULJ8 1098 aa9.76□□□□□ -0.85
NEK3-209ENST00000618856 PTCH2Q9Y6C5 1203 aa9.76□□□□□ -0.85
NEK3-209ENST00000618856 VWA5AO00534 786 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 ATP2A1O14983 1001 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 RANBP6O60518 1105 aaKnown RBP9.75□□□□□ -0.85
NEK3-209ENST00000618856 FMNL1O95466 1100 aaPredicted RBP9.75□□□□□ -0.85
NEK3-209ENST00000618856 MYCNP04198 464 aaPredicted RBP9.75□□□□□ -0.85
NEK3-209ENST00000618856 SNHG28P0DPA3 235 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 MAPK4P31152 587 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 RGS19P49795 217 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 PRKCZQ05513 592 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 NECTIN1Q15223 517 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 MORN1Q5T089 497 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 FAM83BQ5T0W9 1011 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 SAMD1Q6SPF0 538 aaPredicted RBP9.75□□□□□ -0.85
NEK3-209ENST00000618856 DGKHQ86XP1 1220 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 SHCBP1Q8NEM2 672 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 PXYLP1Q8TE99 480 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 ESR2Q92731 530 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 ATG4CQ96DT6 458 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 ZNF333Q96JL9 665 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 TMEM47Q9BQJ4 181 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 TANGO6Q9C0B7 1094 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 PORCNQ9H237 461 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 CNNM2Q9H8M5 875 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 FBXO28Q9NVF7 368 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 ZSWIM5Q9P217 1185 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 ZNF214Q9UL59 606 aaPredicted RBP9.75□□□□□ -0.85
NEK3-209ENST00000618856 GABRQQ9UN88 632 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 TAF6LQ9Y6J9 622 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 ZNF236Q9UL36 1845 aa9.75□□□□□ -0.85
NEK3-209ENST00000618856 RBBP6Q7Z6E9 1792 aaKnown RBP9.74□□□□□ -0.85
NEK3-209ENST00000618856 TNPO2O14787 897 aaKnown RBP9.74□□□□□ -0.85
NEK3-209ENST00000618856 CDC45O75419 566 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 FLOT1O75955 427 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 TOP1P11387 765 aaKnown RBP9.74□□□□□ -0.85
NEK3-209ENST00000618856 XRCC5P13010 732 aaKnown RBP9.74□□□□□ -0.85
NEK3-209ENST00000618856 FLT3LGP49771 235 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 ATP2B2Q01814 1243 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 TMEM132BQ14DG7 1078 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 SLFN13Q68D06 897 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 BTNL9Q6UXG8 535 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.74□□□□□ -0.85
NEK3-209ENST00000618856 LRRC47Q8N1G4 583 aaKnown RBP9.74□□□□□ -0.85
NEK3-209ENST00000618856 PRPF38AQ8NAV1 312 aaKnown RBP9.74□□□□□ -0.85
NEK3-209ENST00000618856 NUP88Q99567 741 aaPredicted RBP9.74□□□□□ -0.85
NEK3-209ENST00000618856 SLF1Q9BQI6 1058 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 MOV10L1Q9BXT6 1211 aaKnown RBP9.74□□□□□ -0.85
NEK3-209ENST00000618856 KRT23Q9C075 422 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 SPATC1LQ9H0A9 340 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 SLC38A10Q9HBR0 1119 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 FEM1BQ9UK73 627 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 STX8Q9UNK0 236 aa9.74□□□□□ -0.85
NEK3-209ENST00000618856 E7EWF7 191 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 KDM4AO75164 1064 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 HOXC6P09630 235 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 FDX1P10109 184 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 BMP3P12645 472 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 OAZ1P54368 228 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 CCNA1P78396 465 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 GRB14Q14449 540 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 SEC23AQ15436 765 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 TSGA10IPQ3SY00 556 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 CCDC178Q5BJE1 867 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 RRP12Q5JTH9 1297 aaKnown RBP9.73□□□□□ -0.85
NEK3-209ENST00000618856 STOX1Q6ZVD7 989 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 GPR142Q7Z601 462 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 ABRAQ8N0Z2 381 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 SLAIN1Q8ND83 568 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 DCAF4Q8WV16 495 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 SOCS4Q8WXH5 440 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 KCNB2Q92953 911 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 COA7Q96BR5 231 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 ZSCAN10Q96SZ4 725 aaPredicted RBP9.73□□□□□ -0.85
NEK3-209ENST00000618856 PAGR1Q9BTK6 254 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 RBM8AQ9Y5S9 174 aaKnown RBP9.73□□□□□ -0.85
NEK3-209ENST00000618856 DOCK3Q8IZD9 2030 aa9.73□□□□□ -0.85
NEK3-209ENST00000618856 SLC15A5A6NIM6 579 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 B4E1Z4 1266 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 TNRC18O15417 2968 aaPredicted RBP9.72□□□□□ -0.85
NEK3-209ENST00000618856 SLC25A27O95847 323 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 PDHBP11177 359 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 PTPREP23469 700 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 MCCP23508 829 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 GRK4P32298 578 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 CYB5R4Q7L1T6 521 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 PLEKHH3Q7Z736 793 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 FAM160B2Q86V87 743 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 RIOX2Q8IUF8 465 aa9.72□□□□□ -0.85
NEK3-209ENST00000618856 MB21D2Q8IYB1 491 aaPredicted RBP9.72□□□□□ -0.85
NEK3-209ENST00000618856 ENAHQ8N8S7 591 aaPredicted RBP9.72□□□□□ -0.85
NEK3-209ENST00000618856 MTA3Q9BTC8 594 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms