RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 E4F1Q66K89 784 aaPredicted RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 KLHDC4Q8TBB5 520 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 USP21Q9UK80 565 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ODF2LQ9ULJ1 636 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 E7EWF7 191 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 GMNNO75496 209 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 TSGA10IPQ3SY00 556 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 AKNAD1Q5T1N1 836 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 PHLDB2Q86SQ0 1253 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 LARSQ9P2J5 1176 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 SPOPO43791 374 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 CCDC14Q49A88 953 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 SLFN12Q8IYM2 578 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ATP8A2Q9NTI2 1148 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 KLHL14Q9P2G3 628 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 CPSF2Q9P2I0 782 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 MROH5Q6ZUA9 1318 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 A0A1W2PP64 1363 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 MAP3K5Q99683 1374 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 APBA3O96018 575 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 MAGEA9P43362 315 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 TNNI2P48788 182 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 GOLGA8FQ08AF8 430 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 GOLGA8DPQ0D2H9 430 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 MIGA1Q8NAN2 632 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 SPATA5Q8NB90 893 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 STX8Q9UNK0 236 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ZNF518AQ6AHZ1 1483 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 METP08581 1390 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ZMYND10O75800 440 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 IRX5P78411 483 aaPredicted RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 CEP85LQ5SZL2 805 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 THOC7Q6I9Y2 204 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 ARMCX5Q6P1M9 558 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 BCAP29Q9UHQ4 241 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 A0A087WUV0 522 aaPredicted RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 ZWINTO95229 277 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 DZIP3Q86Y13 1208 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 CCDC169A6NNP5 214 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 B4E1Z4 1266 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 KCNJ18B7U540 433 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ITGA6P23229 1130 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 LONP1P36776 959 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 NT5C2P49902 561 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 PRKG1Q13976 671 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 KCNJ12Q14500 433 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 LONRF2Q1L5Z9 754 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 KLHL7Q8IXQ5 586 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 MYOCDQ8IZQ8 938 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 CACNA2D3Q8IZS8 1091 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ARHGAP24Q8N264 748 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ZNF594Q96JF6 807 aaPredicted RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 VPS16Q9H269 839 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 GPR108Q9NPR9 543 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 PNMA2Q9UL42 364 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 PRRC2BQ5JSZ5 2229 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 KRT5P13647 590 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 RBL2Q08999 1139 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 BPIFA3Q9BQP9 254 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 ALDH8A1Q9H2A2 487 aaPredicted RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 HAUS4Q9H6D7 363 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 COPRSQ9NQ92 184 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 MAN1B1Q9UKM7 699 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 FAM184BQ9ULE4 1060 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 DNM2P50570 870 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 PNOCQ13519 176 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 DHX40Q8IX18 779 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 MTA3Q9BTC8 594 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 PAX3P23760 479 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 GLE1Q53GS7 698 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 MYSM1Q5VVJ2 828 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 HAUS3Q68CZ6 603 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 CCDC62Q6P9F0 684 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 SRGAP1Q7Z6B7 1085 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 LINC00301Q8NCQ3 95 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 CCHCR1Q8TD31 782 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 CARD10Q9BWT7 1032 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 FAN1Q9Y2M0 1017 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 SH3BGRP55822 239 aaPredicted RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 GNGT1P63211 74 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 FYB2Q5VWT5 728 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 SMIM5Q71RC9 77 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 TPH2Q8IWU9 490 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 OGFOD1Q8N543 542 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 MAGOHBQ96A72 148 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 EIF3CLB5ME19 914 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 LUC7L3O95232 432 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 CYP2C19P33261 490 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 CCT5P48643 541 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 RAPGEF1Q13905 1077 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 TRAPPC3LQ5T215 181 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 TYW1BQ6NUM6 668 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 VPS52Q8N1B4 723 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 EIF3CQ99613 913 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 PCDHA13Q9Y5I0 950 aa3.37□□□□□ -1.87
LPP-221ENST00000618621 TPRP12270 2363 aaKnown RBP3.37□□□□□ -1.87
LPP-221ENST00000618621 PEX26Q7Z412 305 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 CCT6BQ92526 530 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 WDR24Q96S15 920 aa3.36□□□□□ -1.87
LPP-221ENST00000618621 BLZF1Q9H2G9 400 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms