RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 TMEM201Q5SNT2 666 aa5.65□□□□□ -1.5
TARDBP-220ENST00000618606 CYB5D2Q8WUJ1 264 aa5.65□□□□□ -1.5
TARDBP-220ENST00000618606 RNF141Q8WVD5 230 aa5.65□□□□□ -1.5
TARDBP-220ENST00000618606 G6PC3Q9BUM1 346 aa5.65□□□□□ -1.5
TARDBP-220ENST00000618606 CNTD2Q9H8S5 307 aa5.65□□□□□ -1.5
TARDBP-220ENST00000618606 CRTAC1Q9NQ79 661 aa5.65□□□□□ -1.5
TARDBP-220ENST00000618606 PARP2Q9UGN5 583 aa5.65□□□□□ -1.5
TARDBP-220ENST00000618606 FAM221AA4D161 298 aa5.64□□□□□ -1.51
TARDBP-220ENST00000618606 CILPO75339 1184 aa5.64□□□□□ -1.51
TARDBP-220ENST00000618606 CTSHP09668 335 aa5.64□□□□□ -1.51
TARDBP-220ENST00000618606 CORINQ9Y5Q5 1042 aa5.64□□□□□ -1.51
TARDBP-220ENST00000618606 PRR36Q9H6K5 1346 aa5.64□□□□□ -1.51
TARDBP-220ENST00000618606 EFEMP2O95967 443 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 PLCG1P19174 1290 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 VIPR1P32241 457 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 YBX1P67809 324 aaKnown RBP5.63□□□□□ -1.51
TARDBP-220ENST00000618606 LMNB2Q03252 620 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 VMACQ2NL98 169 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 CNKSR3Q6P9H4 555 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 FRMD5Q7Z6J6 570 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 SIRT2Q8IXJ6 389 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 SLFN12Q8IYM2 578 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 TMEFF1Q8IYR6 380 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 SYT8Q8NBV8 401 aa5.63□□□□□ -1.51
TARDBP-220ENST00000618606 NRDCO43847 1150 aa5.62□□□□□ -1.51
TARDBP-220ENST00000618606 LRRN2O75325 713 aa5.62□□□□□ -1.51
TARDBP-220ENST00000618606 YARSP54577 528 aaKnown RBP5.62□□□□□ -1.51
TARDBP-220ENST00000618606 CAMK2GQ13555 558 aaPredicted RBP5.62□□□□□ -1.51
TARDBP-220ENST00000618606 BNC2Q6ZN30 1099 aaPredicted RBP5.62□□□□□ -1.51
TARDBP-220ENST00000618606 TMC4Q7Z404 712 aa5.62□□□□□ -1.51
TARDBP-220ENST00000618606 FAM129CQ86XR2 697 aa5.62□□□□□ -1.51
TARDBP-220ENST00000618606 LINC01356Q8N9X3 169 aa5.62□□□□□ -1.51
TARDBP-220ENST00000618606 FAM13CQ8NE31 585 aa5.62□□□□□ -1.51
TARDBP-220ENST00000618606 GATAD2BQ8WXI9 593 aa5.62□□□□□ -1.51
TARDBP-220ENST00000618606 ADAM7Q9H2U9 754 aa5.62□□□□□ -1.51
TARDBP-220ENST00000618606 SHISA3A0PJX4 238 aa5.61□□□□□ -1.51
TARDBP-220ENST00000618606 ABLIM1O14639 778 aa5.61□□□□□ -1.51
TARDBP-220ENST00000618606 KIR2DL1P43626 348 aaPredicted RBP5.61□□□□□ -1.51
TARDBP-220ENST00000618606 KIR2DL2P43627 348 aaPredicted RBP5.61□□□□□ -1.51
TARDBP-220ENST00000618606 PLP2Q04941 152 aa5.61□□□□□ -1.51
TARDBP-220ENST00000618606 PSMD2Q13200 908 aa5.61□□□□□ -1.51
TARDBP-220ENST00000618606 OLFML2BQ68BL8 750 aa5.61□□□□□ -1.51
TARDBP-220ENST00000618606 DIEXFQ68CQ4 756 aaKnown RBP5.61□□□□□ -1.51
TARDBP-220ENST00000618606 SND1Q7KZF4 910 aaKnown RBP eCLIP5.61□□□□□ -1.51
TARDBP-220ENST00000618606 MZB1Q8WU39 189 aa5.61□□□□□ -1.51
TARDBP-220ENST00000618606 RSRP1Q9BUV0 290 aa5.61□□□□□ -1.51
TARDBP-220ENST00000618606 MYRFQ9Y2G1 1151 aa5.61□□□□□ -1.51
TARDBP-220ENST00000618606 F13A1P00488 732 aa5.6□□□□□ -1.51
TARDBP-220ENST00000618606 PF4P02776 101 aa5.6□□□□□ -1.51
TARDBP-220ENST00000618606 PNLIPP16233 465 aa5.6□□□□□ -1.51
TARDBP-220ENST00000618606 CDR1P51861 262 aa5.6□□□□□ -1.51
TARDBP-220ENST00000618606 RNF111Q6ZNA4 994 aa5.6□□□□□ -1.51
TARDBP-220ENST00000618606 VWCEQ96DN2 955 aa5.6□□□□□ -1.51
TARDBP-220ENST00000618606 ASPNQ9BXN1 380 aa5.6□□□□□ -1.51
TARDBP-220ENST00000618606 CHURC1-FNTBB4DL54 471 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 USP2O75604 605 aaPredicted RBP5.59□□□□□ -1.51
TARDBP-220ENST00000618606 BPNT1O95861 308 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 INSRRP14616 1297 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 ERVFRD-1P60508 538 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 XPCQ01831 940 aaPredicted RBP5.59□□□□□ -1.51
TARDBP-220ENST00000618606 SLC14A2Q15849 920 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 DNAJC14Q6Y2X3 702 aaPredicted RBP5.59□□□□□ -1.51
TARDBP-220ENST00000618606 ENOX1Q8TC92 643 aaKnown RBP5.59□□□□□ -1.51
TARDBP-220ENST00000618606 MAP6Q96JE9 813 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 RHOVQ96L33 236 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 CCDC74BQ96LY2 380 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 KREMEN1Q96MU8 473 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 TMEM74Q96NL1 305 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 BDH2Q9BUT1 245 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 REV1Q9UBZ9 1251 aa5.59□□□□□ -1.51
TARDBP-220ENST00000618606 CNOT11Q9UKZ1 510 aaKnown RBP5.59□□□□□ -1.51
TARDBP-220ENST00000618606 RPL10P27635 214 aaKnown RBP5.58□□□□□ -1.52
TARDBP-220ENST00000618606 PUM1Q14671 1186 aaKnown RBP eCLIP5.58□□□□□ -1.52
TARDBP-220ENST00000618606 CLEC16AQ2KHT3 1053 aa5.58□□□□□ -1.52
TARDBP-220ENST00000618606 CEP128Q6ZU80 1094 aa5.58□□□□□ -1.52
TARDBP-220ENST00000618606 FBXO33Q7Z6M2 555 aa5.58□□□□□ -1.52
TARDBP-220ENST00000618606 RELL1Q8IUW5 271 aa5.58□□□□□ -1.52
TARDBP-220ENST00000618606 IGDCC3Q8IVU1 814 aa5.58□□□□□ -1.52
TARDBP-220ENST00000618606 TP53I13Q8NBR0 393 aaPredicted RBP5.58□□□□□ -1.52
TARDBP-220ENST00000618606 POLR3KQ9Y2Y1 108 aaPredicted RBP5.58□□□□□ -1.52
TARDBP-220ENST00000618606 HTR3BO95264 441 aa5.57□□□□□ -1.52
TARDBP-220ENST00000618606 CAP1Q01518 475 aa5.57□□□□□ -1.52
TARDBP-220ENST00000618606 ZFYVE27Q5T4F4 411 aa5.57□□□□□ -1.52
TARDBP-220ENST00000618606 HHIPL2Q6UWX4 724 aa5.57□□□□□ -1.52
TARDBP-220ENST00000618606 LDHDQ86WU2 507 aa5.57□□□□□ -1.52
TARDBP-220ENST00000618606 USHBP1Q8N6Y0 703 aa5.57□□□□□ -1.52
TARDBP-220ENST00000618606 SYTL5Q8TDW5 730 aaPredicted RBP5.57□□□□□ -1.52
TARDBP-220ENST00000618606 CRELD1Q96HD1 420 aa5.57□□□□□ -1.52
TARDBP-220ENST00000618606 FAM161BQ96MY7 647 aa5.57□□□□□ -1.52
TARDBP-220ENST00000618606 PWWP2AQ96N64 755 aa5.57□□□□□ -1.52
TARDBP-220ENST00000618606 ZMYM5Q9UJ78 669 aa5.57□□□□□ -1.52
TARDBP-220ENST00000618606 F6X3S4 739 aa5.56□□□□□ -1.52
TARDBP-220ENST00000618606 DNAJA2O60884 412 aa5.56□□□□□ -1.52
TARDBP-220ENST00000618606 SDHBP21912 280 aa5.56□□□□□ -1.52
TARDBP-220ENST00000618606 GARTP22102 1010 aa5.56□□□□□ -1.52
TARDBP-220ENST00000618606 GBP2P32456 591 aaPredicted RBP5.56□□□□□ -1.52
TARDBP-220ENST00000618606 TNNI2P48788 182 aa5.56□□□□□ -1.52
TARDBP-220ENST00000618606 PWP1Q13610 501 aa5.56□□□□□ -1.52
TARDBP-220ENST00000618606 RTP5Q14D33 572 aa5.56□□□□□ -1.52
TARDBP-220ENST00000618606 WAPLQ7Z5K2 1190 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms