RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CWC22Q9HCG8 908 aaKnown RBP5.64□□□□□ -1.51
SNCA-213ENST00000618500 HMG20BQ9P0W2 317 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 Q9Y3F1 56 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 MTCH2Q9Y6C9 303 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 LOC102724159A0A0B4J2E5 919 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 ARVCFO00192 962 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 ECM2O94769 699 aaPredicted RBP5.64□□□□□ -1.51
SNCA-213ENST00000618500 CYP2C19P33261 490 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 COG2Q14746 738 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 PWP2Q15269 919 aaKnown RBP5.64□□□□□ -1.51
SNCA-213ENST00000618500 CCDC84Q86UT8 332 aaPredicted RBP5.64□□□□□ -1.51
SNCA-213ENST00000618500 SH3RF3Q8TEJ3 882 aaPredicted RBP5.64□□□□□ -1.51
SNCA-213ENST00000618500 SLC9A7Q96T83 725 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 SH2D4AQ9H788 454 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 CENPFP49454 3210 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 DNAJC25-GNG10A0A024R161 153 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 GABPAQ06546 454 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 LEXMQ3ZCV2 418 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 XAGE2Q96GT9 111 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 RPAP3Q9H6T3 665 aaPredicted RBP5.64□□□□□ -1.51
SNCA-213ENST00000618500 PRKAG3Q9UGI9 489 aa5.64□□□□□ -1.51
SNCA-213ENST00000618500 PLXNA3P51805 1871 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.63□□□□□ -1.51
SNCA-213ENST00000618500 WDR46O15213 610 aaKnown RBP5.63□□□□□ -1.51
SNCA-213ENST00000618500 BAIAP3O94812 1187 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 FCER1AP12319 257 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 ADORA1P30542 326 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 GUCY1A2P33402 732 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 FAM47AQ5JRC9 791 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 DPP9Q86TI2 863 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 RPUSD2Q8IZ73 545 aaKnown RBP5.63□□□□□ -1.51
SNCA-213ENST00000618500 REPS2Q8NFH8 660 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 TINF2Q9BSI4 451 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 PAGR1Q9BTK6 254 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 PRDM12Q9H4Q4 367 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 FAM184BQ9ULE4 1060 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 YBX2Q9Y2T7 364 aaKnown RBP5.63□□□□□ -1.51
SNCA-213ENST00000618500 CEP290O15078 2479 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 NLRC5Q86WI3 1866 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 ALADP13716 330 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 TRIM34Q9BYJ4 488 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 NKX2-4Q9H2Z4 354 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 STARD7Q9NQZ5 370 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 SWAP70Q9UH65 585 aa5.63□□□□□ -1.51
SNCA-213ENST00000618500 A0A1B0GUL7 405 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 ERCC3P19447 782 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 CNGA1P29973 690 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 MRE11P49959 708 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 PTPN11Q06124 597 aaPredicted RBP5.62□□□□□ -1.51
SNCA-213ENST00000618500 BMP8AQ7Z5Y6 402 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 TTC6Q86TZ1 520 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 MAF1Q9H063 256 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 SIL1Q9H173 461 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 EPHX3Q9H6B9 360 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 MYH4Q9Y623 1939 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 FAM196BA6NMK8 535 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 SMIM22K7EJ46 135 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 FGBP02675 491 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 SHMT1P34896 483 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 OAZ1P54368 228 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 NHLH1Q02575 133 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 RBL2Q08999 1139 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 ABCB5Q2M3G0 1257 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 CRACR2BQ8N4Y2 399 aaPredicted RBP5.62□□□□□ -1.51
SNCA-213ENST00000618500 KLHDC4Q8TBB5 520 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 MMP19Q99542 508 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 IRF2BPLQ9H1B7 796 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 SERPINB13Q9UIV8 391 aa5.62□□□□□ -1.51
SNCA-213ENST00000618500 POTEB3A0JP26 581 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 CTAGE5O15320 804 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 GTPBP6O43824 516 aaPredicted RBP5.61□□□□□ -1.51
SNCA-213ENST00000618500 ST18O60284 1047 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 GH2P01242 217 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 PBX2P40425 430 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 NAA16Q6N069 864 aaPredicted RBP5.61□□□□□ -1.51
SNCA-213ENST00000618500 POTEBQ6S5H4 581 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 TMEM179Q6ZVK1 233 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 HLA-CQ95604 372 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 KATNBL1Q9H079 304 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 TMX2Q9Y320 296 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 SCN10AQ9Y5Y9 1956 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 PARNO95453 639 aaKnown RBP5.61□□□□□ -1.51
SNCA-213ENST00000618500 UBTFL1P0CB47 393 aaPredicted RBP5.61□□□□□ -1.51
SNCA-213ENST00000618500 SLC4A10Q6U841 1118 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 ZNF365Q70YC5 407 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 MORC4Q8TE76 937 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 ARHGAP45Q92619 1136 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 VWCEQ96DN2 955 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 GLT1D1Q96MS3 346 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 NOC4LQ9BVI4 516 aaKnown RBP5.61□□□□□ -1.51
SNCA-213ENST00000618500 SLC28A3Q9HAS3 691 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 CABP5Q9NP86 173 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 PQBP1O60828 265 aaKnown RBP5.61□□□□□ -1.51
SNCA-213ENST00000618500 SLURP2P0DP57 97 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 FDX1P10109 184 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 MCAMP43121 646 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 CERKLQ49MI3 558 aaPredicted RBP5.61□□□□□ -1.51
SNCA-213ENST00000618500 PPP2R2DQ66LE6 453 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 AGBL1Q96MI9 1066 aa5.61□□□□□ -1.51
SNCA-213ENST00000618500 FEZ1Q99689 392 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms