RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 TROAPQ12815 778 aa19.4■□□□□ 0.7
TRAPPC3-210ENST00000617904 SPDYE2Q495Y8 402 aa19.4■□□□□ 0.7
TRAPPC3-210ENST00000617904 FAM83AQ86UY5 434 aa19.4■□□□□ 0.7
TRAPPC3-210ENST00000617904 FBXO18Q8NFZ0 1043 aa19.4■□□□□ 0.7
TRAPPC3-210ENST00000617904 HOOK2Q96ED9 719 aa19.4■□□□□ 0.7
TRAPPC3-210ENST00000617904 SLC10A4Q96EP9 437 aa19.4■□□□□ 0.7
TRAPPC3-210ENST00000617904 SENP2Q9HC62 589 aa19.4■□□□□ 0.7
TRAPPC3-210ENST00000617904 ATRNL1Q5VV63 1379 aa19.4■□□□□ 0.7
TRAPPC3-210ENST00000617904 PRPF3O43395 683 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-210ENST00000617904 TTLL1O95922 423 aa19.39■□□□□ 0.69
TRAPPC3-210ENST00000617904 NFIAQ12857 509 aa19.39■□□□□ 0.69
TRAPPC3-210ENST00000617904 NTRK3Q16288 839 aa19.39■□□□□ 0.69
TRAPPC3-210ENST00000617904 PKN2Q16513 984 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-210ENST00000617904 NBPF12Q5TAG4 269 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC3-210ENST00000617904 SLC44A5Q8NCS7 719 aa19.39■□□□□ 0.69
TRAPPC3-210ENST00000617904 CLMNQ96JQ2 1002 aa19.39■□□□□ 0.69
TRAPPC3-210ENST00000617904 VEZTQ9HBM0 779 aa19.39■□□□□ 0.69
TRAPPC3-210ENST00000617904 FAM198AQ9UFP1 575 aa19.39■□□□□ 0.69
TRAPPC3-210ENST00000617904 PPP1R12BO60237 982 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC3-210ENST00000617904 FDPSP14324 419 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-210ENST00000617904 KLHL40Q2TBA0 621 aa19.38■□□□□ 0.69
TRAPPC3-210ENST00000617904 SUPT20HL1Q3ZLR7 823 aa19.38■□□□□ 0.69
TRAPPC3-210ENST00000617904 CERKLQ49MI3 558 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC3-210ENST00000617904 FERMT3Q86UX7 667 aa19.38■□□□□ 0.69
TRAPPC3-210ENST00000617904 FAM177A1Q8N128 213 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC3-210ENST00000617904 TMEM87AQ8NBN3 555 aa19.38■□□□□ 0.69
TRAPPC3-210ENST00000617904 PHKBQ93100 1093 aa19.38■□□□□ 0.69
TRAPPC3-210ENST00000617904 MANSC4A6NHS7 340 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 SMIM22K7EJ46 135 aa19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 USP2O75604 605 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 PARP1P09874 1014 aaKnown RBP19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 SMARCA1P28370 1054 aa19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 RESTQ13127 1097 aa19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 RASA3Q14644 834 aa19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 GRM4Q14833 912 aa19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 FOXD4L6Q3SYB3 417 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 FOXD4L3Q6VB84 417 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 TMTC3Q6ZXV5 915 aa19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 WNK4Q96J92 1243 aa19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 TMEM47Q9BQJ4 181 aa19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 KANSL2Q9H9L4 492 aa19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 IL17RBQ9NRM6 502 aa19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 FAM217BQ9NTX9 383 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-210ENST00000617904 UNCXA6NJT0 531 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 TCP10L2B9ZVM9 353 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 NMT2O60551 498 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 FKTNO75072 461 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 ZBTB48P10074 688 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 CACNB3P54284 484 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 INHBEP58166 350 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 RCSD1Q6JBY9 416 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 TMEM179Q6ZVK1 233 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 NKX2-3Q8TAU0 364 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 SPATA32Q96LK8 384 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 MTMR4Q9NYA4 1195 aa19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.36■□□□□ 0.69
TRAPPC3-210ENST00000617904 ALDH1A1P00352 501 aa19.35■□□□□ 0.69
TRAPPC3-210ENST00000617904 FOSBP53539 338 aa19.35■□□□□ 0.69
TRAPPC3-210ENST00000617904 UBE2HP62256 183 aa19.35■□□□□ 0.69
TRAPPC3-210ENST00000617904 EVX2Q03828 476 aa19.35■□□□□ 0.69
TRAPPC3-210ENST00000617904 DNM1Q05193 864 aaKnown RBP19.35■□□□□ 0.69
TRAPPC3-210ENST00000617904 ASPRV1Q53RT3 343 aa19.35■□□□□ 0.69
TRAPPC3-210ENST00000617904 IFNL1Q8IU54 200 aa19.35■□□□□ 0.69
TRAPPC3-210ENST00000617904 CCDC12Q8WUD4 166 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC3-210ENST00000617904 CEP95Q96GE4 821 aa19.35■□□□□ 0.69
TRAPPC3-210ENST00000617904 LMBRD1Q9NUN5 540 aa19.35■□□□□ 0.69
TRAPPC3-210ENST00000617904 ELP1O95163 1332 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 IGF2BP3O00425 579 aaKnown RBP eCLIP19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 FIBPO43427 364 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 SLC34A2O95436 690 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 CALML3P27482 149 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 SHMT1P34896 483 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 GJA5P36382 358 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 GUCY1B3Q02153 619 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 ABCB5Q2M3G0 1257 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 KRT40Q6A162 431 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 TATDN1Q6P1N9 297 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 SEC63Q9UGP8 760 aaKnown RBP19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 SYNPO2Q9UMS6 1093 aa19.34■□□□□ 0.69
TRAPPC3-210ENST00000617904 DDTLA6NHG4 134 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 TBC1D12O60347 775 aa19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 AKR1B1P15121 316 aa19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 IREB2P48200 963 aaKnown RBP19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 NOVP48745 357 aa19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 FBXO46Q6PJ61 603 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 METTL16Q86W50 562 aaKnown RBP19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 CCDC82Q8N4S0 544 aa19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 CCDC148Q8NFR7 591 aa19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 SH2D4AQ9H788 454 aa19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 NYAP2Q9P242 653 aa19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 CLIP2Q9UDT6 1046 aa19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 CNPY2Q9Y2B0 182 aa19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 V9GY48 417 aaPredicted RBP19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 MYH8P13535 1937 aa19.33■□□□□ 0.69
TRAPPC3-210ENST00000617904 ATP2B2Q01814 1243 aa19.32■□□□□ 0.68
TRAPPC3-210ENST00000617904 GPATCH4Q5T3I0 446 aaKnown RBP19.32■□□□□ 0.68
TRAPPC3-210ENST00000617904 NBPF11Q86T75 865 aa19.32■□□□□ 0.68
TRAPPC3-210ENST00000617904 CDAN1Q8IWY9 1227 aa19.32■□□□□ 0.68
TRAPPC3-210ENST00000617904 ANKRD13AQ8IZ07 590 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms