RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 PLIN4Q96Q06 1357 aa23.73■■□□□ 1.39
SDHA-220ENST00000617470 SYNE3Q6ZMZ3 975 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 GRPEL1Q9HAV7 217 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 TCP11L1Q9NUJ3 509 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 MTMR4Q9NYA4 1195 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 PAPPA2Q9BXP8 1791 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 TRPM7Q96QT4 1865 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 TPRNQ4KMQ1 711 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 CCDC178Q5BJE1 867 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 NOL9Q5SY16 702 aaKnown RBP23.72■■□□□ 1.39
SDHA-220ENST00000617470 SPATA32Q96LK8 384 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 CLIP2Q9UDT6 1046 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 SNCAIPQ9Y6H5 919 aa23.72■■□□□ 1.39
SDHA-220ENST00000617470 IGKV6D-41A0A0C4DH26 115 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 SYCE3A1L190 88 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 IFNAR1P17181 557 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 MRE11P49959 708 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 RTN1Q16799 776 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 IFIT1BQ5T764 474 aaKnown RBP23.71■■□□□ 1.39
SDHA-220ENST00000617470 CPLX2Q6PUV4 134 aaKnown RBP23.71■■□□□ 1.39
SDHA-220ENST00000617470 FANCBQ8NB91 859 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 RGS22Q8NE09 1264 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 GINM1Q9NU53 330 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 USP17L5A8MUK1 530 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 TTLL1O95922 423 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 PTPRAP18433 802 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 HUNKP57058 714 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 LDLRAD1Q5T700 205 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 NBPF11Q86T75 865 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 ATAD5Q96QE3 1844 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 ALG1Q9BT22 464 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 FTOQ9C0B1 505 aaKnown RBP eCLIP23.71■■□□□ 1.395e-6■□□□□ 8.8
SDHA-220ENST00000617470 STK36Q9NRP7 1315 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 ZHX2Q9Y6X8 837 aa23.71■■□□□ 1.39
SDHA-220ENST00000617470 DOCK1Q14185 1865 aa23.7■■□□□ 1.38
SDHA-220ENST00000617470 EEF2P13639 858 aaKnown RBP23.7■■□□□ 1.38
SDHA-220ENST00000617470 SLC10A4Q96EP9 437 aa23.7■■□□□ 1.38
SDHA-220ENST00000617470 OTOFQ9HC10 1997 aa23.7■■□□□ 1.38
SDHA-220ENST00000617470 FMNL1O95466 1100 aaPredicted RBP23.69■■□□□ 1.38
SDHA-220ENST00000617470 PGBD1Q96JS3 809 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 ABT1Q9ULW3 272 aaKnown RBP23.69■■□□□ 1.38
SDHA-220ENST00000617470 TMEM88BA6NKF7 163 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 KIF28PB7ZC32 967 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 RAD21O60216 631 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 PPP4R3BQ5MIZ7 849 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 RCSD1Q6JBY9 416 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 DGKHQ86XP1 1220 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 NUP133Q8WUM0 1156 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 CNKSR2Q8WXI2 1034 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 USP28Q96RU2 1077 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 ARHGEF10LQ9HCE6 1279 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 MTMR7Q9Y216 660 aa23.69■■□□□ 1.38
SDHA-220ENST00000617470 TROAPQ12815 778 aa23.68■■□□□ 1.38
SDHA-220ENST00000617470 CMTR1Q8N1G2 835 aaKnown RBP23.68■■□□□ 1.38
SDHA-220ENST00000617470 LRRC47Q8N1G4 583 aaKnown RBP23.68■■□□□ 1.38
SDHA-220ENST00000617470 OTUD5Q96G74 571 aa23.68■■□□□ 1.38
SDHA-220ENST00000617470 SLC26A6Q9BXS9 759 aa23.68■■□□□ 1.38
SDHA-220ENST00000617470 PANK2Q9BZ23 570 aa23.68■■□□□ 1.38
SDHA-220ENST00000617470 KAT14Q9H8E8 782 aa23.68■■□□□ 1.38
SDHA-220ENST00000617470 AS3MTQ9HBK9 375 aa23.68■■□□□ 1.38
SDHA-220ENST00000617470 CFAP45Q9UL16 551 aa23.68■■□□□ 1.38
SDHA-220ENST00000617470 KIF23Q02241 960 aaPredicted RBP23.67■■□□□ 1.38
SDHA-220ENST00000617470 SSRP1Q08945 709 aaKnown RBP23.67■■□□□ 1.38
SDHA-220ENST00000617470 LRSAM1Q6UWE0 723 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 ACER1Q8TDN7 264 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 SYAP1Q96A49 352 aaPredicted RBP23.67■■□□□ 1.38
SDHA-220ENST00000617470 FEZ1Q99689 392 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 TMEM47Q9BQJ4 181 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 NYAP2Q9P242 653 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 RCOR1Q9UKL0 485 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 GREB1LQ9C091 1923 aaPredicted RBP23.67■■□□□ 1.38
SDHA-220ENST00000617470 TRIM75PA6NK02 468 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 ECE1P42892 770 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 ZYXQ15942 572 aaKnown RBP23.67■■□□□ 1.38
SDHA-220ENST00000617470 KRT40Q6A162 431 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 ERO1BQ86YB8 467 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 SIAH1Q8IUQ4 282 aa23.67■■□□□ 1.38
SDHA-220ENST00000617470 TOP1P11387 765 aaKnown RBP23.66■■□□□ 1.38
SDHA-220ENST00000617470 CEBPZQ03701 1054 aaKnown RBP23.66■■□□□ 1.38
SDHA-220ENST00000617470 SPP2Q13103 211 aa23.66■■□□□ 1.38
SDHA-220ENST00000617470 ATL3Q6DD88 541 aa23.66■■□□□ 1.38
SDHA-220ENST00000617470 SAPCD2Q86UD0 394 aa23.66■■□□□ 1.38
SDHA-220ENST00000617470 OPTNQ96CV9 577 aa23.66■■□□□ 1.38
SDHA-220ENST00000617470 CCDC196A0A1B0GTZ2 297 aa23.65■■□□□ 1.38
SDHA-220ENST00000617470 A0A1W2PRG0 241 aa23.65■■□□□ 1.38
SDHA-220ENST00000617470 UNCXA6NJT0 531 aa23.65■■□□□ 1.38
SDHA-220ENST00000617470 FUT2Q10981 343 aa23.65■■□□□ 1.38
SDHA-220ENST00000617470 CCDC183Q5T5S1 534 aa23.65■■□□□ 1.38
SDHA-220ENST00000617470 LIG1P18858 919 aa23.65■■□□□ 1.38
SDHA-220ENST00000617470 CATIPQ7Z7H3 387 aa23.65■■□□□ 1.38
SDHA-220ENST00000617470 ZNF280CQ8ND82 737 aa23.65■■□□□ 1.38
SDHA-220ENST00000617470 PNMA1Q8ND90 353 aa23.65■■□□□ 1.38
SDHA-220ENST00000617470 SPDYE5A6NIY4 337 aa23.64■■□□□ 1.38
SDHA-220ENST00000617470 PPP2R5BQ15173 497 aa23.64■■□□□ 1.38
SDHA-220ENST00000617470 CCDC82Q8N4S0 544 aa23.64■■□□□ 1.38
SDHA-220ENST00000617470 ANKS1AQ92625 1134 aa23.64■■□□□ 1.38
SDHA-220ENST00000617470 ZNF396Q96N95 335 aaPredicted RBP23.64■■□□□ 1.38
SDHA-220ENST00000617470 SH2D4AQ9H788 454 aa23.64■■□□□ 1.38
SDHA-220ENST00000617470 TLL2Q9Y6L7 1015 aa23.64■■□□□ 1.38
SDHA-220ENST00000617470 NOVP48745 357 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms