RNA–Protein interactions for RNA: ENST00000617022.4

DDB2-212, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 2,181 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-212ENST00000617022 FERMT3Q86UX7 667 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 TRIM22Q8IYM9 498 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 SRBD1Q8N5C6 995 aaKnown RBP18.44■□□□□ 0.54
DDB2-212ENST00000617022 STK36Q9NRP7 1315 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 hCG_1642624A0A1W2PR95 340 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 USP17L2Q6R6M4 530 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 MAP3K14Q99558 947 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 ALG1Q9BT22 464 aa18.44■□□□□ 0.54
DDB2-212ENST00000617022 USP17L5A8MUK1 530 aa18.43■□□□□ 0.54
DDB2-212ENST00000617022 SIAH1Q8IUQ4 282 aa18.43■□□□□ 0.54
DDB2-212ENST00000617022 GPT2Q8TD30 523 aa18.43■□□□□ 0.54
DDB2-212ENST00000617022 C8orf76Q96K31 380 aa18.43■□□□□ 0.54
DDB2-212ENST00000617022 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.43■□□□□ 0.54
DDB2-212ENST00000617022 MYH4Q9Y623 1939 aa18.43■□□□□ 0.54
DDB2-212ENST00000617022 ZNF710Q8N1W2 664 aa18.42■□□□□ 0.54
DDB2-212ENST00000617022 NYAP2Q9P242 653 aa18.42■□□□□ 0.54
DDB2-212ENST00000617022 ZBTB21Q9ULJ3 1066 aa18.42■□□□□ 0.54
DDB2-212ENST00000617022 CNTNAP5Q8WYK1 1306 aa18.42■□□□□ 0.54
DDB2-212ENST00000617022 PARP1P09874 1014 aaKnown RBP18.42■□□□□ 0.54
DDB2-212ENST00000617022 PDHBP11177 359 aa18.42■□□□□ 0.54
DDB2-212ENST00000617022 PDIA4P13667 645 aaKnown RBP18.42■□□□□ 0.54
DDB2-212ENST00000617022 EPHX2P34913 555 aa18.42■□□□□ 0.54
DDB2-212ENST00000617022 CAP2P40123 477 aa18.42■□□□□ 0.54
DDB2-212ENST00000617022 RNF26Q9BY78 433 aaPredicted RBP18.42■□□□□ 0.54
DDB2-212ENST00000617022 PALM3A6NDB9 673 aaPredicted RBP18.41■□□□□ 0.54
DDB2-212ENST00000617022 PHF20L1A8MW92 1017 aa18.41■□□□□ 0.54
DDB2-212ENST00000617022 RAD21O60216 631 aa18.41■□□□□ 0.54
DDB2-212ENST00000617022 DLK2Q6UY11 383 aa18.41■□□□□ 0.54
DDB2-212ENST00000617022 PIBF1Q8WXW3 757 aa18.41■□□□□ 0.54
DDB2-212ENST00000617022 CPVLQ9H3G5 476 aa18.41■□□□□ 0.54
DDB2-212ENST00000617022 FZD1Q9UP38 647 aa18.41■□□□□ 0.54
DDB2-212ENST00000617022 V9GY48 417 aaPredicted RBP18.41■□□□□ 0.54
DDB2-212ENST00000617022 FRMPD2Q68DX3 1309 aaPredicted RBP18.41■□□□□ 0.54
DDB2-212ENST00000617022 DEXIO95424 95 aa18.41■□□□□ 0.54
DDB2-212ENST00000617022 AKAP17AQ02040 695 aaKnown RBP18.41■□□□□ 0.54
DDB2-212ENST00000617022 PITPNM2Q9BZ72 1349 aa18.41■□□□□ 0.54
DDB2-212ENST00000617022 POLR2AP24928 1970 aaKnown RBP18.4■□□□□ 0.54
DDB2-212ENST00000617022 TAF3Q5VWG9 929 aa18.4■□□□□ 0.54
DDB2-212ENST00000617022 FBXO18Q8NFZ0 1043 aa18.4■□□□□ 0.54
DDB2-212ENST00000617022 MKL1Q969V6 931 aa18.4■□□□□ 0.54
DDB2-212ENST00000617022 DCPSQ96C86 337 aaKnown RBP18.4■□□□□ 0.54
DDB2-212ENST00000617022 KLRF2D3W0D1 207 aa18.4■□□□□ 0.54
DDB2-212ENST00000617022 PRPF3O43395 683 aaKnown RBP18.4■□□□□ 0.54
DDB2-212ENST00000617022 PRPF40AO75400 957 aaKnown RBP18.4■□□□□ 0.54
DDB2-212ENST00000617022 SLC35G1Q2M3R5 365 aa18.4■□□□□ 0.54
DDB2-212ENST00000617022 USP50Q70EL3 339 aaPredicted RBP18.4■□□□□ 0.54
DDB2-212ENST00000617022 CCDC84Q86UT8 332 aaPredicted RBP18.4■□□□□ 0.54
DDB2-212ENST00000617022 WASF1Q92558 559 aa18.4■□□□□ 0.54
DDB2-212ENST00000617022 RBM27Q9P2N5 1060 aaKnown RBP18.4■□□□□ 0.54
DDB2-212ENST00000617022 PPP2R3BQ9Y5P8 575 aa18.4■□□□□ 0.54
DDB2-212ENST00000617022 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.4■□□□□ 0.54
DDB2-212ENST00000617022 A0A1W2PRG0 241 aa18.39■□□□□ 0.53
DDB2-212ENST00000617022 POTECB2RU33 542 aa18.39■□□□□ 0.53
DDB2-212ENST00000617022 ADM5C9JUS6 153 aa18.39■□□□□ 0.53
DDB2-212ENST00000617022 MBD3O95983 291 aa18.39■□□□□ 0.53
DDB2-212ENST00000617022 SNHG28P0DPA3 235 aa18.39■□□□□ 0.53
DDB2-212ENST00000617022 ECE1P42892 770 aa18.39■□□□□ 0.53
DDB2-212ENST00000617022 GNAQP50148 359 aa18.39■□□□□ 0.53
DDB2-212ENST00000617022 PKN1Q16512 942 aa18.39■□□□□ 0.53
DDB2-212ENST00000617022 FAM173BQ6P4H8 233 aa18.39■□□□□ 0.53
DDB2-212ENST00000617022 TMEM63CQ9P1W3 806 aa18.39■□□□□ 0.53
DDB2-212ENST00000617022 BAZ2BQ9UIF8 2168 aaKnown RBP18.38■□□□□ 0.53
DDB2-212ENST00000617022 CYTH3O43739 400 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 PDE4CQ08493 712 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 EAPPQ56P03 285 aaPredicted RBP18.38■□□□□ 0.53
DDB2-212ENST00000617022 DCAF15Q66K64 600 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 KRT40Q6A162 431 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 GPCPD1Q9NPB8 672 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 MYH6P13533 1939 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 SSC5DA1L4H1 1573 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 INPP5BP32019 993 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 RESTQ13127 1097 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 SULF1Q8IWU6 871 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 ACER1Q8TDN7 264 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 ZNF341Q9BYN7 854 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 UBA5Q9GZZ9 404 aa18.38■□□□□ 0.53
DDB2-212ENST00000617022 TAF1DQ9H5J8 278 aaPredicted RBP18.38■□□□□ 0.53
DDB2-212ENST00000617022 SYCE3A1L190 88 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 PTMAP06454 111 aaKnown RBP18.37■□□□□ 0.53
DDB2-212ENST00000617022 ASNSP08243 561 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 ZNF543Q08ER8 600 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 CCDC96Q2M329 555 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 ASPRV1Q53RT3 343 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 KCTD1Q719H9 257 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 ATAD5Q96QE3 1844 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 IQCA1LA6NCM1 817 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 F5H6K3 240 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 VEGFAP15692 232 aaPredicted RBP18.37■□□□□ 0.53
DDB2-212ENST00000617022 CBX1P83916 185 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 KLRC3Q07444 240 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 PRKG1Q13976 671 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 TRIM29Q14134 588 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 SLFN13Q68D06 897 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 KRT26Q7Z3Y9 468 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 BBXQ8WY36 941 aaPredicted RBP18.37■□□□□ 0.53
DDB2-212ENST00000617022 HOOK2Q96ED9 719 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 LZTS2Q9BRK4 669 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 ARHGEF10LQ9HCE6 1279 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 VPS54Q9P1Q0 977 aa18.37■□□□□ 0.53
DDB2-212ENST00000617022 ATP6V1DQ9Y5K8 247 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms