RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 TNFRSF25Q93038 417 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 NACAP1Q9BZK3 213 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 TAB2Q9NYJ8 693 aa17.52■□□□□ 0.4
GPN1-212ENST00000616939 LGALS16A8MUM7 142 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 ATP2B1P20020 1258 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 HERVK_113P62684 666 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 AKAP17AQ02040 695 aaKnown RBP17.51■□□□□ 0.39
GPN1-212ENST00000616939 MAP3K12Q12852 859 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 NELFBQ8WX92 580 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 PURBQ96QR8 312 aaKnown RBP17.51■□□□□ 0.39
GPN1-212ENST00000616939 MMS19Q96T76 1030 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 CRACR2AQ9BSW2 395 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 GEMIN8Q9NWZ8 242 aaKnown RBP17.51■□□□□ 0.39
GPN1-212ENST00000616939 CAPN11Q9UMQ6 739 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 ATXN2Q99700 1313 aaKnown RBP17.51■□□□□ 0.39
GPN1-212ENST00000616939 TOGARAM1Q9Y4F4 1720 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 A6NNZ2 444 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 PHACTR2O75167 634 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 FGFR2P21802 821 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 ITGA6P23229 1130 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 EEF1GP26641 437 aaKnown RBP17.51■□□□□ 0.39
GPN1-212ENST00000616939 PHKA1P46020 1223 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 TRAPPC10P48553 1259 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 SEC23AQ15436 765 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 PKN1Q16512 942 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 TUBB8Q3ZCM7 444 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 CCNI2Q6ZMN8 369 aaPredicted RBP17.51■□□□□ 0.39
GPN1-212ENST00000616939 KIF6Q6ZMV9 814 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 SMYD4Q8IYR2 804 aaPredicted RBP17.51■□□□□ 0.39
GPN1-212ENST00000616939 FNBP4Q8N3X1 1017 aaPredicted RBP17.51■□□□□ 0.39
GPN1-212ENST00000616939 FAM76AQ8TAV0 307 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 SHISA4Q96DD7 197 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 VPS16Q9H269 839 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 GUCA1BQ9UMX6 200 aa17.51■□□□□ 0.39
GPN1-212ENST00000616939 PDS5AQ29RF7 1337 aaKnown RBP17.51■□□□□ 0.39
GPN1-212ENST00000616939 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.51■□□□□ 0.39
GPN1-212ENST00000616939 DUOX1Q9NRD9 1551 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 KRT86O43790 486 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 CTSWP56202 376 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 FUT2Q10981 343 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 PPFIA1Q13136 1202 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 MAPK8IP2Q13387 824 aaPredicted RBP17.5■□□□□ 0.39
GPN1-212ENST00000616939 TTC38Q5R3I4 469 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 SWT1Q5T5J6 900 aaKnown RBP17.5■□□□□ 0.39
GPN1-212ENST00000616939 MMS22LQ6ZRQ5 1243 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 AMOTL1Q8IY63 956 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 MMGT1Q8N4V1 131 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 MB21D1Q8N884 522 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 AENQ8WTP8 325 aaKnown RBP17.5■□□□□ 0.39
GPN1-212ENST00000616939 NOC3LQ8WTT2 800 aaKnown RBP17.5■□□□□ 0.39
GPN1-212ENST00000616939 CHP1Q99653 195 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 INCENPQ9NQS7 918 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 CNNM1Q9NRU3 951 aa17.5■□□□□ 0.39
GPN1-212ENST00000616939 RBM28Q9NW13 759 aaKnown RBP17.5■□□□□ 0.39
GPN1-212ENST00000616939 LUC7L2Q9Y383 392 aaKnown RBP17.5■□□□□ 0.39
GPN1-212ENST00000616939 CLSTN1O94985 981 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 ATP1A1P05023 1023 aaKnown RBP17.49■□□□□ 0.39
GPN1-212ENST00000616939 CDC25AP30304 524 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 CYLC1P35663 651 aaPredicted RBP17.49■□□□□ 0.39
GPN1-212ENST00000616939 PUM3Q15397 648 aaKnown RBP17.49■□□□□ 0.39
GPN1-212ENST00000616939 CCDC170Q8IYT3 715 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 ZNF507Q8TCN5 953 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 LPIN2Q92539 896 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 THAP9Q9H5L6 903 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 ANAPC4Q9UJX5 808 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 TAOK2Q9UL54 1235 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 SOS2Q07890 1332 aaPredicted RBP17.49■□□□□ 0.39
GPN1-212ENST00000616939 NUP98P52948 1817 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 TTC26A0AVF1 554 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 FAM205CA6NFA0 338 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 GOLGA8KD6RF30 607 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 AGPSO00116 658 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 CASP1P29466 404 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 CDK17Q00537 523 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 UBXN1Q04323 297 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 TSR1Q2NL82 804 aaKnown RBP17.49■□□□□ 0.39
GPN1-212ENST00000616939 CCDC70Q6NSX1 233 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 FAM89AQ96GI7 184 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 NUP58Q9BVL2 599 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 SELENOOQ9BVL4 669 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 FAM184BQ9ULE4 1060 aa17.49■□□□□ 0.39
GPN1-212ENST00000616939 PARP1P09874 1014 aaKnown RBP17.48■□□□□ 0.39
GPN1-212ENST00000616939 CCDC122Q5T0U0 273 aa17.48■□□□□ 0.39
GPN1-212ENST00000616939 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
GPN1-212ENST00000616939 SPATA5Q8NB90 893 aa17.48■□□□□ 0.39
GPN1-212ENST00000616939 JAKMIP2Q96AA8 810 aa17.48■□□□□ 0.39
GPN1-212ENST00000616939 IQCDQ96DY2 449 aa17.48■□□□□ 0.39
GPN1-212ENST00000616939 SH3GL2Q99962 352 aa17.48■□□□□ 0.39
GPN1-212ENST00000616939 GREM2Q9H772 168 aa17.48■□□□□ 0.39
GPN1-212ENST00000616939 ARMT1Q9H993 441 aa17.48■□□□□ 0.39
GPN1-212ENST00000616939 MROH5Q6ZUA9 1318 aa17.48■□□□□ 0.39
GPN1-212ENST00000616939 MYH1P12882 1939 aa17.48■□□□□ 0.39
GPN1-212ENST00000616939 RPN1P04843 607 aaKnown RBP17.47■□□□□ 0.39
GPN1-212ENST00000616939 EPB41P11171 864 aaKnown RBP17.47■□□□□ 0.39
GPN1-212ENST00000616939 GGCXP38435 758 aa17.47■□□□□ 0.39
GPN1-212ENST00000616939 TDO2P48775 406 aa17.47■□□□□ 0.39
GPN1-212ENST00000616939 EARS2Q5JPH6 523 aaKnown RBP17.47■□□□□ 0.39
GPN1-212ENST00000616939 WDR59Q6PJI9 974 aa17.47■□□□□ 0.39
GPN1-212ENST00000616939 GIGYF2Q6Y7W6 1299 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms