RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 LACRTQ9GZZ8 138 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 SLC4A4Q9Y6R1 1079 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 PDE2AO00408 941 aaPredicted RBP14.78□□□□□ -0.04
MSH6-214ENST00000616033 ATP6V1AP38606 617 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 TTF1Q15361 905 aaPredicted RBP14.78□□□□□ -0.04
MSH6-214ENST00000616033 RNF217Q8TC41 542 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 COG1Q8WTW3 980 aa14.78□□□□□ -0.04
MSH6-214ENST00000616033 A0A087WUV0 522 aaPredicted RBP14.77□□□□□ -0.04
MSH6-214ENST00000616033 ESYT3A0FGR9 886 aa14.77□□□□□ -0.04
MSH6-214ENST00000616033 SARSP49591 514 aaKnown RBP14.77□□□□□ -0.04
MSH6-214ENST00000616033 MMS22LQ6ZRQ5 1243 aa14.77□□□□□ -0.04
MSH6-214ENST00000616033 APTXQ7Z2E3 356 aaKnown RBP14.77□□□□□ -0.04
MSH6-214ENST00000616033 LRRC37A3O60309 1634 aa14.77□□□□□ -0.04
MSH6-214ENST00000616033 BACH1O14867 736 aa14.77□□□□□ -0.05
MSH6-214ENST00000616033 ERCC5P28715 1186 aaPredicted RBP14.77□□□□□ -0.05
MSH6-214ENST00000616033 CCDC181Q5TID7 509 aa14.77□□□□□ -0.05
MSH6-214ENST00000616033 KANK3Q6NY19 840 aa14.77□□□□□ -0.05
MSH6-214ENST00000616033 AGPAT5Q9NUQ2 364 aa14.77□□□□□ -0.05
MSH6-214ENST00000616033 ABCF2Q9UG63 623 aa14.77□□□□□ -0.05
MSH6-214ENST00000616033 SRPRBQ9Y5M8 271 aaKnown RBP14.77□□□□□ -0.05
MSH6-214ENST00000616033 MYH15Q9Y2K3 1946 aa14.77□□□□□ -0.05
MSH6-214ENST00000616033 RGPD2P0DJD1 1756 aa14.77□□□□□ -0.05
MSH6-214ENST00000616033 CDHR2Q9BYE9 1310 aa14.77□□□□□ -0.05
MSH6-214ENST00000616033 PPP1R3GB7ZBB8 358 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 KIAA0754O94854 1291 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 PDE6AP16499 860 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 CADPS2Q86UW7 1296 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 GIMAP7Q8NHV1 300 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 TRIM47Q96LD4 638 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 DMGDHQ9UI17 866 aaKnown RBP14.76□□□□□ -0.05
MSH6-214ENST00000616033 REXO2Q9Y3B8 237 aaKnown RBP14.76□□□□□ -0.05
MSH6-214ENST00000616033 GUCY2FP51841 1108 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 EVA1CP58658 441 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 PTGDRQ13258 359 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 TCIRG1Q13488 830 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 LRCH2Q5VUJ6 765 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 ARL8AQ96BM9 186 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 LRRC1Q9BTT6 524 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 CEP131Q9UPN4 1083 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 RCCD1A6NED2 376 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 B4DLN1 442 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 CYP27B1O15528 508 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 FMNL1O95466 1100 aaPredicted RBP14.76□□□□□ -0.05
MSH6-214ENST00000616033 HPDP32754 393 aaPredicted RBP14.76□□□□□ -0.05
MSH6-214ENST00000616033 PAK1Q13153 545 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 CCDC70Q6NSX1 233 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 PIK3AP1Q6ZUJ8 805 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 IFNL3Q8IZI9 196 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 SDR42E1Q8WUS8 393 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 WASF1Q92558 559 aa14.76□□□□□ -0.05
MSH6-214ENST00000616033 CALR3Q96L12 384 aaKnown RBP14.76□□□□□ -0.05
MSH6-214ENST00000616033 CPDO75976 1380 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 CYP2D7A0A087X1C5 515 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 KRT14P02533 472 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 HNRNPH1P31943 449 aaKnown RBP14.75□□□□□ -0.05
MSH6-214ENST00000616033 ADD2P35612 726 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 PROCA1Q8NCQ7 364 aaPredicted RBP14.75□□□□□ -0.05
MSH6-214ENST00000616033 CTCFLQ8NI51 663 aaPredicted RBP14.75□□□□□ -0.05
MSH6-214ENST00000616033 C1orf167Q5SNV9 1468 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 NCK2O43639 380 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 APBA1Q02410 837 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 MCTP2Q6DN12 878 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 OTUD6BQ8N6M0 293 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 OR8K1Q8NGG5 319 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 MYO1BO43795 1136 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 SKAP2O75563 359 aaPredicted RBP14.75□□□□□ -0.05
MSH6-214ENST00000616033 NALCNQ8IZF0 1738 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 TMEM87BQ96K49 555 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 MLXIPQ9HAP2 919 aa14.75□□□□□ -0.05
MSH6-214ENST00000616033 RFX7Q2KHR2 1363 aa14.74□□□□□ -0.05
MSH6-214ENST00000616033 PRPF6O94906 941 aaKnown RBP14.74□□□□□ -0.05
MSH6-214ENST00000616033 PLEKP08567 350 aaPredicted RBP14.74□□□□□ -0.05
MSH6-214ENST00000616033 CEP57Q86XR8 500 aa14.74□□□□□ -0.05
MSH6-214ENST00000616033 GREM2Q9H772 168 aa14.74□□□□□ -0.05
MSH6-214ENST00000616033 ZNHIT6Q9NWK9 470 aaKnown RBP14.74□□□□□ -0.05
MSH6-214ENST00000616033 BCCIPQ9P287 314 aaKnown RBP eCLIP14.74□□□□□ -0.05
MSH6-214ENST00000616033 TACC3Q9Y6A5 838 aa14.74□□□□□ -0.05
MSH6-214ENST00000616033 PP2D1A8MPX8 630 aa14.74□□□□□ -0.05
MSH6-214ENST00000616033 KRT86O43790 486 aa14.74□□□□□ -0.05
MSH6-214ENST00000616033 SETQ01105 290 aaPredicted RBP14.74□□□□□ -0.05
MSH6-214ENST00000616033 TCP11X2Q5H9J9 407 aa14.74□□□□□ -0.05
MSH6-214ENST00000616033 RASGRP4Q8TDF6 673 aa14.74□□□□□ -0.05
MSH6-214ENST00000616033 CARD10Q9BWT7 1032 aa14.74□□□□□ -0.05
MSH6-214ENST00000616033 CD248Q9HCU0 757 aa14.74□□□□□ -0.05
MSH6-214ENST00000616033 MAGEC2Q9UBF1 373 aaPredicted RBP14.74□□□□□ -0.05
MSH6-214ENST00000616033 AGPSO00116 658 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 PLEKHA8P1O95397 391 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 ITGA6P23229 1130 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 PRCPP42785 496 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 GUCY1A3Q02108 690 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 ACTN3Q08043 901 aaPredicted RBP14.73□□□□□ -0.05
MSH6-214ENST00000616033 TYW1BQ6NUM6 668 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 LRP10Q7Z4F1 713 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 ZNF654Q8IZM8 581 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 TRIML1Q8N9V2 468 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 FANCBQ8NB91 859 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 BRMS1Q9HCU9 246 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 LRWD1Q9UFC0 647 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 BUB1O43683 1085 aa14.73□□□□□ -0.05
MSH6-214ENST00000616033 DEXIO95424 95 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms