RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 USH1GQ495M9 461 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 CCDC121Q6ZUS5 278 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 IFT81Q8WYA0 676 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 FAM212AQ96EL1 285 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 STK10O94804 968 aaKnown RBP10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 FAM47AQ5JRC9 791 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 VTI1AQ96AJ9 217 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 DNM2P50570 870 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 KRBA2Q6ZNG9 492 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 GCNT3O95395 438 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 FBXO18Q8NFZ0 1043 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 MAP2P11137 1827 aaKnown RBP10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 PNPLA6Q8IY17 1366 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 TRIM37O94972 964 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 MYL1P05976 194 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 P4HA1P13674 534 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 SP4Q02446 784 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 ICA1Q05084 483 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 PPM1EQ8WY54 764 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 TAB2Q9NYJ8 693 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 SAMD15Q9P1V8 674 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 EXOC3O60645 756 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 FOSP01100 380 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 RBM6P78332 1123 aaKnown RBP10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 OTUD6AQ7L8S5 288 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 ADORA1P30542 326 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 SCRN1Q12765 414 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 GPBP1Q86WP2 473 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 CCDC97Q96F63 343 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 MYCLP12524 364 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 FAM196AQ6ZSG2 479 aa10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 BIN2Q9UBW5 565 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-207ENST00000615901 OVOS2A0A0G2JMS6 1433 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 OVOS2A0A0J9YW53 1432 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 OVOS2Q6IE36 1432 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 POLR2MP0CAP2 368 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 PHKA1P46020 1223 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 MTMR3Q13615 1198 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 DDX25Q9UHL0 483 aaKnown RBP10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 GPATCH4Q5T3I0 446 aaKnown RBP10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 PPP1R9BQ96SB3 815 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 PCDHA7Q9UN72 937 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 GAS8O95995 478 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 XRCC5P13010 732 aaKnown RBP10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 PPP2R5EQ16537 467 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 PCDHB13Q9Y5F0 798 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 APBA3O96018 575 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 BAG6P46379 1132 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 GNPTABQ3T906 1256 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 SLC5A4Q9NY91 659 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 CAPN2P17655 700 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 TMEM63CQ9P1W3 806 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 CFAP221Q4G0U5 840 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 MIER3Q7Z3K6 550 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 C2CD5Q86YS7 1000 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 MYRIPQ8NFW9 859 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 NKIRAS1Q9NYS0 192 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 PTPRMP28827 1452 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 WDR19Q8NEZ3 1342 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 GTF2IP78347 998 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 MYOCDQ8IZQ8 938 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 AK8Q96MA6 479 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 KNL1Q8NG31 2342 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 INF2Q27J81 1249 aa10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 EDC3Q96F86 508 aaKnown RBP10.11□□□□□ -0.79
SPTBN1-207ENST00000615901 IRX3P78415 501 aaPredicted RBP10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 TCP10Q12799 353 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 EBAG9O00559 213 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 PPP6R2O75170 966 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 CCDC17Q96LX7 622 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 SELENOSQ9BQE4 189 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 XPO4Q9C0E2 1151 aaKnown RBP10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 CFBP00751 764 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 WHAMMP3Q1A5X7 153 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 VPS18Q9P253 973 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.1□□□□□ -0.795e-7■■□□□ 11.6
SPTBN1-207ENST00000615901 PALLDQ8WX93 1383 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 KLRF2D3W0D1 207 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 FAM173BQ6P4H8 233 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 BBOX1O75936 387 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 ERCC5P28715 1186 aaPredicted RBP10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 DPH6Q7L8W6 267 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 NLRP10Q86W26 655 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 USP28Q96RU2 1077 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 TXNDC16Q9P2K2 825 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 NR1I2O75469 434 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 KRT9P35527 623 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 ADD2P35612 726 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 MTX1Q13505 466 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 CERKLQ49MI3 558 aaPredicted RBP10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 APOA5Q6Q788 366 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 CLEC4GQ6UXB4 293 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 UBLCP1Q8WVY7 318 aaPredicted RBP10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 SERTAD1Q9UHV2 236 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 KLHL30Q0D2K2 578 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 OTUD6BQ8N6M0 293 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 ATRIPQ8WXE1 791 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 CDHR2Q9BYE9 1310 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 PAK2Q13177 524 aa10.1□□□□□ -0.79
SPTBN1-207ENST00000615901 NSMFQ6X4W1 530 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms