RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 AFAP1L1Q8TED9 768 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 CCDC51Q96ER9 411 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 MAP3K14Q99558 947 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 TSG101Q99816 390 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 TXKP42681 527 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 MAP3K9P80192 1104 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 WHAMMP3Q1A5X7 153 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 TMEM266Q2M3C6 531 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 IFT81Q8WYA0 676 aa14.07□□□□□ -0.16
MSH6-213ENST00000614496 BAZ2BQ9UIF8 2168 aaKnown RBP14.06□□□□□ -0.16
MSH6-213ENST00000614496 GOLGA6L10A6NI86 522 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 B4DLN1 442 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 CCNT1O60563 726 aaKnown RBP14.06□□□□□ -0.16
MSH6-213ENST00000614496 SRGAP2O75044 1071 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 PARP1P09874 1014 aaKnown RBP14.06□□□□□ -0.16
MSH6-213ENST00000614496 SUGCTQ9HAC7 445 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 BCCIPQ9P287 314 aaKnown RBP eCLIP14.06□□□□□ -0.16
MSH6-213ENST00000614496 MPHOSPH10O00566 681 aaKnown RBP14.06□□□□□ -0.16
MSH6-213ENST00000614496 ZPR1O75312 459 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 ARID4AP29374 1257 aaPredicted RBP14.06□□□□□ -0.16
MSH6-213ENST00000614496 NOP2P46087 812 aaKnown RBP14.06□□□□□ -0.16
MSH6-213ENST00000614496 TOB1P50616 345 aaPredicted RBP14.06□□□□□ -0.16
MSH6-213ENST00000614496 FXR1P51114 621 aaKnown RBP eCLIP14.06□□□□□ -0.162e-6■■■□□ 14.9
MSH6-213ENST00000614496 CYP27A1Q02318 531 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 PPP2R5BQ15173 497 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 TYW1BQ6NUM6 668 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 TRIM65Q6PJ69 517 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 BLIDQ8IZY5 108 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 CCDC87Q9NVE4 849 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 ATP8B1O43520 1251 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 TICAM2Q86XR7 235 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 NLRP3Q96P20 1036 aa14.06□□□□□ -0.16
MSH6-213ENST00000614496 ZEB2O60315 1214 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 KCNQ4P56696 695 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 DDB1Q16531 1140 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 SND1Q7KZF4 910 aaKnown RBP eCLIP14.05□□□□□ -0.166e-6■□□□□ 9.2
MSH6-213ENST00000614496 ENAHQ8N8S7 591 aaPredicted RBP14.05□□□□□ -0.16
MSH6-213ENST00000614496 STAG1Q8WVM7 1258 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 FAM170AA1A519 330 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 GNAQP50148 359 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 MICALL1Q8N3F8 863 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 SEPT11Q9NVA2 429 aaKnown RBP14.05□□□□□ -0.16
MSH6-213ENST00000614496 SPATA31A3Q5VYP0 1347 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 STK36Q9NRP7 1315 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 TFRCP02786 760 aaKnown RBP14.05□□□□□ -0.16
MSH6-213ENST00000614496 CSF1RP07333 972 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 TUBB4BP68371 445 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 TUBB2AQ13885 445 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 TUBB2BQ9BVA1 445 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 SLAIN2Q9P270 581 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 HDAC6Q9UBN7 1215 aa14.05□□□□□ -0.16
MSH6-213ENST00000614496 BAG3O95817 575 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 HIBADHP31937 336 aaKnown RBP14.04□□□□□ -0.16
MSH6-213ENST00000614496 CYP2C19P33261 490 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 CASP8Q14790 479 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 TCERG1LQ5VWI1 586 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 MAATS1Q7Z4T9 603 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 C2CD5Q86YS7 1000 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 BICDL2A1A5D9 508 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 TMCO5BA8MYB1 307 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 TNNI2P48788 182 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 NR1I3Q14994 352 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 NTRK3Q16288 839 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 SECISBP2LQ93073 1101 aaKnown RBP14.04□□□□□ -0.16
MSH6-213ENST00000614496 FAM204AQ9H8W3 233 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 C1orf167Q5SNV9 1468 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 FGFR1OPO95684 399 aaKnown RBP14.04□□□□□ -0.16
MSH6-213ENST00000614496 EIF6P56537 245 aaKnown RBP14.04□□□□□ -0.16
MSH6-213ENST00000614496 TRIM28Q13263 835 aaKnown RBP14.04□□□□□ -0.16
MSH6-213ENST00000614496 PARP10Q53GL7 1025 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 RNF187Q5TA31 235 aaPredicted RBP14.04□□□□□ -0.16
MSH6-213ENST00000614496 SPTY2D1Q68D10 685 aaPredicted RBP14.04□□□□□ -0.16
MSH6-213ENST00000614496 CABP7Q86V35 215 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 FAM76AQ8TAV0 307 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 PP2D1A8MPX8 630 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 H7C1D1 291 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 HSF2BPO75031 334 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 NDUFA10O95299 355 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 TUBBP07437 444 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 CYP2D6P10635 497 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 BMP6P22004 513 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 ZNF579Q8NAF0 562 aaKnown RBP14.04□□□□□ -0.16
MSH6-213ENST00000614496 PNMA1Q8ND90 353 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 CHP1Q99653 195 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 RAB34Q9BZG1 259 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 NLRC4Q9NPP4 1024 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 TRIM10Q9UDY6 481 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 TFR2Q9UP52 801 aa14.04□□□□□ -0.16
MSH6-213ENST00000614496 UBR1Q8IWV7 1749 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 ACTN4O43707 911 aaKnown RBP14.03□□□□□ -0.16
MSH6-213ENST00000614496 TBC1D8O95759 1140 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 TMX4Q9H1E5 349 aaPredicted RBP14.03□□□□□ -0.16
MSH6-213ENST00000614496 HAUS4Q9H6D7 363 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 ZNF287Q9HBT7 754 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 ABHD10Q9NUJ1 306 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.03□□□□□ -0.16
MSH6-213ENST00000614496 A0A1B0GTH6 734 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 PRPF3O43395 683 aaKnown RBP14.03□□□□□ -0.16
MSH6-213ENST00000614496 ALX1Q15699 326 aa14.03□□□□□ -0.16
MSH6-213ENST00000614496 C6orf50Q9HD87 102 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms