RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 TFAP4Q01664 338 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 MAP3K10Q02779 954 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 APOBRQ0VD83 1088 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 MOGSQ13724 837 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 KIF22Q14807 665 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 ARHGEF6Q15052 776 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 FAM47AQ5JRC9 791 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 MIGA2Q7L4E1 593 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 ERO1BQ86YB8 467 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 ENAHQ8N8S7 591 aaPredicted RBP13.38□□□□□ -0.27
SLIRP-212ENST00000613856 ANKS1AQ92625 1134 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 TRIM34Q9BYJ4 488 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 UNC93B1Q9H1C4 597 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 GPHNQ9NQX3 736 aaPredicted RBP13.38□□□□□ -0.27
SLIRP-212ENST00000613856 DOCK1Q14185 1865 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 MYPNQ86TC9 1320 aa13.38□□□□□ -0.27
SLIRP-212ENST00000613856 IGKV6D-41A0A0C4DH26 115 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 KLF18A0A0U1RQI7 1052 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 GJB1P08034 283 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 PRKCZQ05513 592 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 ST3GAL1Q11201 340 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 SNAPC2Q13487 334 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 APOA5Q6Q788 366 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 DGKHQ86XP1 1220 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 CHMP4CQ96CF2 233 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 ZKSCAN3Q9BRR0 538 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 RNF208Q9H0X6 261 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 BRPF3Q9ULD4 1205 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 PTPRFP10586 1907 aa13.37□□□□□ -0.27
SLIRP-212ENST00000613856 CCDC69A6NI79 296 aa13.36□□□□□ -0.27
SLIRP-212ENST00000613856 GOLGA8BA8MQT2 603 aa13.36□□□□□ -0.27
SLIRP-212ENST00000613856 PDHXO00330 501 aa13.36□□□□□ -0.27
SLIRP-212ENST00000613856 FARP2O94887 1054 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-212ENST00000613856 FMNL1O95466 1100 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-212ENST00000613856 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
SLIRP-212ENST00000613856 AKR1B1P15121 316 aa13.36□□□□□ -0.27
SLIRP-212ENST00000613856 PDIA3P30101 505 aaKnown RBP13.36□□□□□ -0.27
SLIRP-212ENST00000613856 PPIL2Q13356 520 aa13.36□□□□□ -0.27
SLIRP-212ENST00000613856 IFIT1BQ5T764 474 aaKnown RBP13.36□□□□□ -0.27
SLIRP-212ENST00000613856 RCSD1Q6JBY9 416 aa13.36□□□□□ -0.27
SLIRP-212ENST00000613856 RAET1EQ8TD07 263 aa13.36□□□□□ -0.27
SLIRP-212ENST00000613856 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
SLIRP-212ENST00000613856 HOOK2Q96ED9 719 aa13.36□□□□□ -0.27
SLIRP-212ENST00000613856 LARP6Q9BRS8 491 aaKnown RBP13.36□□□□□ -0.27
SLIRP-212ENST00000613856 SLKQ9H2G2 1235 aaPredicted RBP13.36□□□□□ -0.27
SLIRP-212ENST00000613856 SENP2Q9HC62 589 aa13.36□□□□□ -0.27
SLIRP-212ENST00000613856 IL17RBQ9NRM6 502 aa13.36□□□□□ -0.27
SLIRP-212ENST00000613856 DDAH1O94760 285 aa13.35□□□□□ -0.27
SLIRP-212ENST00000613856 CYP2C8P10632 490 aa13.35□□□□□ -0.27
SLIRP-212ENST00000613856 ELNP15502 786 aa13.35□□□□□ -0.27
SLIRP-212ENST00000613856 CERKLQ49MI3 558 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-212ENST00000613856 NFXL1Q6ZNB6 911 aa13.35□□□□□ -0.27
SLIRP-212ENST00000613856 Q7L0L9 218 aa13.35□□□□□ -0.27
SLIRP-212ENST00000613856 CCDC83Q8IWF9 413 aa13.35□□□□□ -0.27
SLIRP-212ENST00000613856 ZNF654Q8IZM8 581 aa13.35□□□□□ -0.27
SLIRP-212ENST00000613856 LLPHQ9BRT6 129 aaKnown RBP13.35□□□□□ -0.27
SLIRP-212ENST00000613856 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.35□□□□□ -0.272e-6■□□□□ 10.5
SLIRP-212ENST00000613856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.35□□□□□ -0.27
SLIRP-212ENST00000613856 BIN2Q9UBW5 565 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-212ENST00000613856 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.35□□□□□ -0.27
SLIRP-212ENST00000613856 SLC12A7Q9Y666 1083 aa13.35□□□□□ -0.27
SLIRP-212ENST00000613856 MYH6P13533 1939 aa13.35□□□□□ -0.27
SLIRP-212ENST00000613856 FAM196BA6NMK8 535 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 ZBTB43O43298 467 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 NMT2O60551 498 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 CALM1P0DP23 149 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 CALM2P0DP24 149 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 CALM3P0DP25 149 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 SLURP2P0DP57 97 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 DDIT3P35638 169 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 PRMT2P55345 433 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 SCRN1Q12765 414 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 SYNE3Q6ZMZ3 975 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 TMEM179Q6ZVK1 233 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 DIS3LQ8TF46 1054 aaKnown RBP13.34□□□□□ -0.27
SLIRP-212ENST00000613856 CEP95Q96GE4 821 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 HTATIP2Q9BUP3 242 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 CWC22Q9HCG8 908 aaKnown RBP13.34□□□□□ -0.27
SLIRP-212ENST00000613856 ZCCHC17Q9NP64 241 aaKnown RBP13.34□□□□□ -0.27
SLIRP-212ENST00000613856 EYSQ5T1H1 3165 aa13.34□□□□□ -0.27
SLIRP-212ENST00000613856 DHX16O60231 1041 aaKnown RBP13.33□□□□□ -0.28
SLIRP-212ENST00000613856 GNRH1P01148 92 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 BCRP11274 1271 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 METAP2P50579 478 aaKnown RBP eCLIP13.33□□□□□ -0.287e-8■□□□□ 9.9
SLIRP-212ENST00000613856 STK3Q13188 491 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 PPP2R5BQ15173 497 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 ABCB5Q2M3G0 1257 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 DCAF15Q66K64 600 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 GPAT2Q6NUI2 795 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 CATIPQ7Z7H3 387 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 ANKRD23Q86SG2 305 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 NECAB1Q8N987 351 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 MAP3K14Q99558 947 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 KAT14Q9H8E8 782 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 GINM1Q9NU53 330 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 MTMR4Q9NYA4 1195 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 PHIPQ8WWQ0 1821 aa13.33□□□□□ -0.28
SLIRP-212ENST00000613856 CUL9Q8IWT3 2517 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms