RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 SLC1A4P43007 532 aa15.96■□□□□ 0.15
TMEM254-213ENST00000613758 AKAP17AQ02040 695 aaKnown RBP15.96■□□□□ 0.15
TMEM254-213ENST00000613758 CCDC96Q2M329 555 aa15.96■□□□□ 0.15
TMEM254-213ENST00000613758 GMCL1Q96IK5 515 aa15.96■□□□□ 0.15
TMEM254-213ENST00000613758 FMR1Q06787 632 aaKnown RBP eCLIP15.96■□□□□ 0.14
TMEM254-213ENST00000613758 GPATCH4Q5T3I0 446 aaKnown RBP15.96■□□□□ 0.14
TMEM254-213ENST00000613758 MOB2Q70IA6 237 aa15.96■□□□□ 0.14
TMEM254-213ENST00000613758 KCTD1Q719H9 257 aa15.96■□□□□ 0.14
TMEM254-213ENST00000613758 FEZ1Q99689 392 aa15.96■□□□□ 0.14
TMEM254-213ENST00000613758 WDR18Q9BV38 432 aa15.96■□□□□ 0.14
TMEM254-213ENST00000613758 UBA5Q9GZZ9 404 aa15.96■□□□□ 0.14
TMEM254-213ENST00000613758 AS3MTQ9HBK9 375 aa15.96■□□□□ 0.14
TMEM254-213ENST00000613758 CSADQ9Y600 493 aa15.96■□□□□ 0.14
TMEM254-213ENST00000613758 ATAD5Q96QE3 1844 aa15.96■□□□□ 0.14
TMEM254-213ENST00000613758 CNTNAP5Q8WYK1 1306 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 UBE2Q2LH0YL09 131 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 DEXIO95424 95 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 PDIA4P13667 645 aaKnown RBP15.95■□□□□ 0.14
TMEM254-213ENST00000613758 SMARCA1P28370 1054 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 VGLL4Q14135 290 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 ZYXQ15942 572 aaKnown RBP15.95■□□□□ 0.14
TMEM254-213ENST00000613758 MAP3K11Q16584 847 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 SLC35G1Q2M3R5 365 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 KIAA1755Q5JYT7 1200 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 ARMC9Q7Z3E5 817 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 WASF1Q92558 559 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 ALG1Q9BT22 464 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 CPVLQ9H3G5 476 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 VCPKMTQ9H867 229 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 ISY1Q9ULR0 285 aaKnown RBP15.95■□□□□ 0.14
TMEM254-213ENST00000613758 ZHX2Q9Y6X8 837 aa15.95■□□□□ 0.14
TMEM254-213ENST00000613758 hCG_1642624A0A1W2PR95 340 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 CYTH3O43739 400 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 FOSBP53539 338 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 SPP2Q13103 211 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 DOCK1Q14185 1865 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 FOXD4L5Q5VV16 416 aaPredicted RBP15.94■□□□□ 0.14
TMEM254-213ENST00000613758 TTBK2Q6IQ55 1244 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 SPICE1Q8N0Z3 855 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 FOXD4L4Q8WXT5 416 aaPredicted RBP15.94■□□□□ 0.14
TMEM254-213ENST00000613758 SPZ1Q9BXG8 430 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 KIAA1683Q9H0B3 1180 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 ZNF408Q9H9D4 720 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.94■□□□□ 0.14
TMEM254-213ENST00000613758 SNCAIPQ9Y6H5 919 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 WDR33Q9C0J8 1336 aaKnown RBP15.94■□□□□ 0.14
TMEM254-213ENST00000613758 DDX11L8A8MPP1 907 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 USP17L10C9JJH3 530 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 BMP3P12645 472 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 CHADLQ6NUI6 762 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 ANKRD13AQ8IZ07 590 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 ZNF280CQ8ND82 737 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 PIBF1Q8WXW3 757 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 C8orf76Q96K31 380 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 AIFM3Q96NN9 605 aa15.94■□□□□ 0.14
TMEM254-213ENST00000613758 NUP88Q99567 741 aaPredicted RBP15.94■□□□□ 0.14
TMEM254-213ENST00000613758 VPS37CA5D8V6 355 aaPredicted RBP15.93■□□□□ 0.14
TMEM254-213ENST00000613758 H3BQV1 296 aa15.93■□□□□ 0.14
TMEM254-213ENST00000613758 PKN1Q16512 942 aa15.93■□□□□ 0.14
TMEM254-213ENST00000613758 IFFO2Q5TF58 517 aa15.93■□□□□ 0.14
TMEM254-213ENST00000613758 CHAMP1Q96JM3 812 aa15.93■□□□□ 0.14
TMEM254-213ENST00000613758 GPBP1L1Q9HC44 474 aaPredicted RBP15.93■□□□□ 0.14
TMEM254-213ENST00000613758 VAT1LQ9HCJ6 419 aa15.93■□□□□ 0.14
TMEM254-213ENST00000613758 RBM27Q9P2N5 1060 aaKnown RBP15.93■□□□□ 0.14
TMEM254-213ENST00000613758 MTMR6Q9Y217 621 aa15.93■□□□□ 0.14
TMEM254-213ENST00000613758 SLC16A2P36021 539 aa15.93■□□□□ 0.14
TMEM254-213ENST00000613758 RIOX1Q9H6W3 641 aa15.93■□□□□ 0.14
TMEM254-213ENST00000613758 ZSCAN22P10073 491 aaPredicted RBP15.92■□□□□ 0.14
TMEM254-213ENST00000613758 BACE1P56817 501 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 MTMR2Q13614 643 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 FAM83BQ5T0W9 1011 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 CLMNQ96JQ2 1002 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 GJB4Q9NTQ9 266 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 TRIM75PA6NK02 468 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 TMEM232C9JQI7 657 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 USP14P54578 494 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 GUCY1B3Q02153 619 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 LDLRAD1Q5T700 205 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 OTUD7BQ6GQQ9 843 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 ADGRF4Q8IZF3 695 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 RRP36Q96EU6 259 aaKnown RBP15.92■□□□□ 0.14
TMEM254-213ENST00000613758 ELP3Q9H9T3 547 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 AFG3L2Q9Y4W6 797 aa15.92■□□□□ 0.14
TMEM254-213ENST00000613758 ITGBL1O95965 494 aaPredicted RBP15.91■□□□□ 0.14
TMEM254-213ENST00000613758 SCG2P13521 617 aa15.91■□□□□ 0.14
TMEM254-213ENST00000613758 TRIM29Q14134 588 aa15.91■□□□□ 0.14
TMEM254-213ENST00000613758 PFKFB3Q16875 520 aaPredicted RBP15.91■□□□□ 0.14
TMEM254-213ENST00000613758 FBXO18Q8NFZ0 1043 aa15.91■□□□□ 0.14
TMEM254-213ENST00000613758 LPAR1Q92633 364 aa15.91■□□□□ 0.14
TMEM254-213ENST00000613758 EMILIN3Q9NT22 766 aa15.91■□□□□ 0.14
TMEM254-213ENST00000613758 C19orf81C9J6K1 198 aa15.9■□□□□ 0.14
TMEM254-213ENST00000613758 CELF2O95319 508 aaKnown RBP15.9■□□□□ 0.14
TMEM254-213ENST00000613758 IKQ13123 557 aaPredicted RBP15.9■□□□□ 0.14
TMEM254-213ENST00000613758 MCTP1Q6DN14 999 aa15.9■□□□□ 0.14
TMEM254-213ENST00000613758 RGS22Q8NE09 1264 aa15.9■□□□□ 0.14
TMEM254-213ENST00000613758 PIGSQ96S52 555 aa15.9■□□□□ 0.14
TMEM254-213ENST00000613758 JMJD4Q9H9V9 463 aa15.9■□□□□ 0.14
TMEM254-213ENST00000613758 BAZ2BQ9UIF8 2168 aaKnown RBP15.9■□□□□ 0.14
TMEM254-213ENST00000613758 FKBP1BP68106 108 aa15.9■□□□□ 0.14
TMEM254-213ENST00000613758 KRT40Q6A162 431 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms