RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ALG1Q9BT22 464 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 SLC26A6Q9BXS9 759 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 TDRD3Q9H7E2 651 aaKnown RBP10.35□□□□□ -0.75
CCDC47-207ENST00000612558 IL21Q9HBE4 155 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 FAM198AQ9UFP1 575 aa10.35□□□□□ -0.75
CCDC47-207ENST00000612558 ENTPD3O75355 529 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 MBD3O95983 291 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 KIF5BP33176 963 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 MMP14P50281 582 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 CACNB3P54284 484 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 GUCY1B3Q02153 619 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 TNIP1Q15025 636 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 DLGAP5Q15398 846 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 CIAPIN1Q6FI81 312 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 SAMD7Q7Z3H4 446 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 PNMA1Q8ND90 353 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 BBXQ8WY36 941 aaPredicted RBP10.34□□□□□ -0.75
CCDC47-207ENST00000612558 RNF26Q9BY78 433 aaPredicted RBP10.34□□□□□ -0.75
CCDC47-207ENST00000612558 SCAND2PQ9GZW5 306 aaPredicted RBP10.34□□□□□ -0.75
CCDC47-207ENST00000612558 GDPD2Q9HCC8 539 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 PI4KBQ9UBF8 816 aa10.34□□□□□ -0.75
CCDC47-207ENST00000612558 FIBPO43427 364 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 DEXIO95424 95 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 NOVP48745 357 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 AKAP17AQ02040 695 aaKnown RBP10.33□□□□□ -0.76
CCDC47-207ENST00000612558 TCP10Q12799 353 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 TRIM29Q14134 588 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 ATL3Q6DD88 541 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 OTUD7BQ6GQQ9 843 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 FAM173BQ6P4H8 233 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 TRAF7Q6Q0C0 670 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 TMTC3Q6ZXV5 915 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 FOXP4Q8IVH2 680 aaPredicted RBP10.33□□□□□ -0.76
CCDC47-207ENST00000612558 ZFPM1Q8IX07 1006 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 CCDC82Q8N4S0 544 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 MTMR14Q8NCE2 650 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 NLGN2Q8NFZ4 835 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 TMEM47Q9BQJ4 181 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 TMOD2Q9NZR1 351 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 CFAP45Q9UL16 551 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 STX8Q9UNK0 236 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 PLIN4Q96Q06 1357 aa10.33□□□□□ -0.76
CCDC47-207ENST00000612558 PRPF3O43395 683 aaKnown RBP10.32□□□□□ -0.76
CCDC47-207ENST00000612558 SHMT1P34896 483 aa10.32□□□□□ -0.76
CCDC47-207ENST00000612558 FUT2Q10981 343 aa10.32□□□□□ -0.76
CCDC47-207ENST00000612558 TJAP1Q5JTD0 557 aa10.32□□□□□ -0.76
CCDC47-207ENST00000612558 KRT40Q6A162 431 aa10.32□□□□□ -0.76
CCDC47-207ENST00000612558 BRAPQ7Z569 592 aa10.32□□□□□ -0.76
CCDC47-207ENST00000612558 ZSCAN29Q8IWY8 852 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-207ENST00000612558 CMTR1Q8N1G2 835 aaKnown RBP10.32□□□□□ -0.76
CCDC47-207ENST00000612558 GPT2Q8TD30 523 aa10.32□□□□□ -0.76
CCDC47-207ENST00000612558 CCDC17Q96LX7 622 aa10.32□□□□□ -0.76
CCDC47-207ENST00000612558 ZNF396Q96N95 335 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-207ENST00000612558 AIFM3Q96NN9 605 aa10.32□□□□□ -0.76
CCDC47-207ENST00000612558 ARFGEF1Q9Y6D6 1849 aa10.32□□□□□ -0.76
CCDC47-207ENST00000612558 MYH8P13535 1937 aa10.32□□□□□ -0.76
CCDC47-207ENST00000612558 COL2A1P02458 1487 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 ELP1O95163 1332 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 DDTLA6NHG4 134 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 TOP1P11387 765 aaKnown RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 XBP1P17861 261 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 RPS12P25398 132 aaKnown RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 GUCY1A2P33402 732 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 GNAQP50148 359 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 UBE2HP62256 183 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 KIF23Q02241 960 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 GRM4Q14833 912 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 FKBP1CQ5VVH2 108 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 SH3BP5LQ7L8J4 393 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 METTL16Q86W50 562 aaKnown RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 CEP95Q96GE4 821 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 TRIM34Q9BYJ4 488 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 PRKD2Q9BZL6 878 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 GZF1Q9H116 711 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 GJB4Q9NTQ9 266 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 MTMR4Q9NYA4 1195 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 TFIP11Q9UBB9 837 aaKnown RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 ZNF70Q9UC06 446 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 MYH6P13533 1939 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 ATRNL1Q5VV63 1379 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 IGKV6D-41A0A0C4DH26 115 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 FZD9O00144 591 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 MYO1BO43795 1136 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 GADD45BO75293 160 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 PLEKHA8P1O95397 391 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 AKR1B1P15121 316 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 EIF6P56537 245 aaKnown RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 RASSF7Q02833 373 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 TATDN1Q6P1N9 297 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 SRBD1Q8N5C6 995 aaKnown RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 FAM151AQ8WW52 585 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 TATDN2Q93075 761 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 SPATA32Q96LK8 384 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 RBM27Q9P2N5 1060 aaKnown RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 PNMA3Q9UL41 463 aa10.31□□□□□ -0.76
CCDC47-207ENST00000612558 V9GY48 417 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-207ENST00000612558 BAZ2BQ9UIF8 2168 aaKnown RBP10.3□□□□□ -0.76
CCDC47-207ENST00000612558 UBE2Q2LH0YL09 131 aa10.3□□□□□ -0.76
CCDC47-207ENST00000612558 NRG2O14511 850 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms