RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 TRIM75PA6NK02 468 aa14.95□□□□□ -0.02
PRKN-210ENST00000612540 KIF5BP33176 963 aa14.95□□□□□ -0.02
PRKN-210ENST00000612540 SPP2Q13103 211 aa14.95□□□□□ -0.02
PRKN-210ENST00000612540 SLFN13Q68D06 897 aa14.95□□□□□ -0.02
PRKN-210ENST00000612540 RASGRP2Q7LDG7 609 aa14.95□□□□□ -0.02
PRKN-210ENST00000612540 SIAH1Q8IUQ4 282 aa14.95□□□□□ -0.02
PRKN-210ENST00000612540 TMX2Q9Y320 296 aa14.95□□□□□ -0.02
PRKN-210ENST00000612540 PTPRFP10586 1907 aa14.95□□□□□ -0.02
PRKN-210ENST00000612540 FRMPD2Q68DX3 1309 aaPredicted RBP14.94□□□□□ -0.02
PRKN-210ENST00000612540 TRPA1O75762 1119 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 NDUFB10O96000 172 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 PARP1P09874 1014 aaKnown RBP14.94□□□□□ -0.02
PRKN-210ENST00000612540 RCAN1P53805 252 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 SCRN1Q12765 414 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 TROAPQ12815 778 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 MTMR2Q13614 643 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 GRM4Q14833 912 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 LDLRAD1Q5T700 205 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 CPLX2Q6PUV4 134 aaKnown RBP14.94□□□□□ -0.02
PRKN-210ENST00000612540 ERO1BQ86YB8 467 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
PRKN-210ENST00000612540 SPICE1Q8N0Z3 855 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 FANCBQ8NB91 859 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 ZNF280CQ8ND82 737 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 CNKSR2Q8WXI2 1034 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 MKL1Q969V6 931 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 SLC10A4Q96EP9 437 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 WDR18Q9BV38 432 aa14.94□□□□□ -0.02
PRKN-210ENST00000612540 CCDC196A0A1B0GTZ2 297 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 SPDYE5A6NIY4 337 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 USP17L10C9JJH3 530 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 F5H6K3 240 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 DHX16O60231 1041 aaKnown RBP14.93□□□□□ -0.02
PRKN-210ENST00000612540 GOLGA8HP0CJ92 632 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 PDHBP11177 359 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 CDC27P30260 824 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 SLC1A4P43007 532 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 MLLT1Q03111 559 aaPredicted RBP14.93□□□□□ -0.02
PRKN-210ENST00000612540 KLRC3Q07444 240 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 ST3GAL1Q11201 340 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 IKQ13123 557 aaPredicted RBP14.93□□□□□ -0.02
PRKN-210ENST00000612540 USP17L2Q6R6M4 530 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 GMCL1P1Q8NEA9 526 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 DCAF4Q8WV16 495 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 OPTNQ96CV9 577 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 IPO9Q96P70 1041 aaKnown RBP14.93□□□□□ -0.02
PRKN-210ENST00000612540 VCPKMTQ9H867 229 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 GPCPD1Q9NPB8 672 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 RBM28Q9NW13 759 aaKnown RBP14.93□□□□□ -0.02
PRKN-210ENST00000612540 SYNPO2Q9UMS6 1093 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 NID2Q14112 1375 aa14.93□□□□□ -0.02
PRKN-210ENST00000612540 DTNBO60941 627 aa14.92□□□□□ -0.02
PRKN-210ENST00000612540 PPFIA3O75145 1194 aa14.92□□□□□ -0.02
PRKN-210ENST00000612540 ADD1P35611 737 aaKnown RBP14.92□□□□□ -0.02
PRKN-210ENST00000612540 USP14P54578 494 aa14.92□□□□□ -0.02
PRKN-210ENST00000612540 HMGCS2P54868 508 aa14.92□□□□□ -0.02
PRKN-210ENST00000612540 ASPRV1Q53RT3 343 aa14.92□□□□□ -0.02
PRKN-210ENST00000612540 KCTD1Q719H9 257 aa14.92□□□□□ -0.02
PRKN-210ENST00000612540 NUP88Q99567 741 aaPredicted RBP14.92□□□□□ -0.02
PRKN-210ENST00000612540 KIAA1683Q9H0B3 1180 aa14.92□□□□□ -0.02
PRKN-210ENST00000612540 TMOD4Q9NZQ9 345 aa14.92□□□□□ -0.02
PRKN-210ENST00000612540 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.92□□□□□ -0.02
PRKN-210ENST00000612540 UNCXA6NJT0 531 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 CDKL5O76039 1030 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 PLEKHA8P1O95397 391 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 BMP3P12645 472 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 GNAQP50148 359 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 BACE1P56817 501 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 PPATQ06203 517 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 ZNF543Q08ER8 600 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 PPIL2Q13356 520 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 CUL4AQ13619 759 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 PPP2R5BQ15173 497 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 FAM83BQ5T0W9 1011 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 SAMD1Q6SPF0 538 aaPredicted RBP14.91□□□□□ -0.02
PRKN-210ENST00000612540 TMTC3Q6ZXV5 915 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 STAG2Q8N3U4 1231 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 CCDC82Q8N4S0 544 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 MAP3K14Q99558 947 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 MAD2L2Q9UI95 211 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 SMC3Q9UQE7 1217 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 AFG3L2Q9Y4W6 797 aa14.91□□□□□ -0.02
PRKN-210ENST00000612540 PTPDC1A2A3K4 754 aa14.9□□□□□ -0.02
PRKN-210ENST00000612540 C19orf81C9J6K1 198 aa14.9□□□□□ -0.02
PRKN-210ENST00000612540 KLRF2D3W0D1 207 aa14.9□□□□□ -0.02
PRKN-210ENST00000612540 IRF6O14896 467 aa14.9□□□□□ -0.02
PRKN-210ENST00000612540 MKRN3Q13064 507 aaKnown RBP14.9□□□□□ -0.02
PRKN-210ENST00000612540 KIAA1755Q5JYT7 1200 aa14.9□□□□□ -0.02
PRKN-210ENST00000612540 GPATCH4Q5T3I0 446 aaKnown RBP14.9□□□□□ -0.02
PRKN-210ENST00000612540 GADL1Q6ZQY3 521 aa14.9□□□□□ -0.02
PRKN-210ENST00000612540 CMTR1Q8N1G2 835 aaKnown RBP14.9□□□□□ -0.02
PRKN-210ENST00000612540 PIBF1Q8WXW3 757 aa14.9□□□□□ -0.02
PRKN-210ENST00000612540 DDX11Q96FC9 970 aa14.9□□□□□ -0.02
PRKN-210ENST00000612540 GMCL1Q96IK5 515 aa14.9□□□□□ -0.02
PRKN-210ENST00000612540 WNK4Q96J92 1243 aa14.9□□□□□ -0.02
PRKN-210ENST00000612540 FAM217BQ9NTX9 383 aaPredicted RBP14.9□□□□□ -0.02
PRKN-210ENST00000612540 LOC285556D6RIA3 1793 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 PALM3A6NDB9 673 aaPredicted RBP14.89□□□□□ -0.03
PRKN-210ENST00000612540 TMEM232C9JQI7 657 aa14.89□□□□□ -0.03
PRKN-210ENST00000612540 JAK2O60674 1132 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms