RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 CERKLQ49MI3 558 aaPredicted RBP12.62□□□□□ -0.39
SSX3-204ENST00000612497 PPP2R2DQ66LE6 453 aa12.62□□□□□ -0.39
SSX3-204ENST00000612497 TATDN1Q6P1N9 297 aa12.62□□□□□ -0.39
SSX3-204ENST00000612497 VTI1AQ96AJ9 217 aa12.62□□□□□ -0.39
SSX3-204ENST00000612497 MTIF3Q9H2K0 278 aaKnown RBP12.62□□□□□ -0.39
SSX3-204ENST00000612497 CABP5Q9NP86 173 aa12.62□□□□□ -0.39
SSX3-204ENST00000612497 C11orf16Q9NQ32 467 aa12.62□□□□□ -0.39
SSX3-204ENST00000612497 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
SSX3-204ENST00000612497 ADAMTS4O75173 837 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 FGBP02675 491 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 AKR1A1P14550 325 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 ARID4AP29374 1257 aaPredicted RBP12.61□□□□□ -0.39
SSX3-204ENST00000612497 MCAMP43121 646 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 RABGGTBP53611 331 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 KCNA10Q16322 511 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 ADGRA1Q86SQ6 560 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 CDCA7LQ96GN5 454 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 GLT1D1Q96MS3 346 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 TINF2Q9BSI4 451 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 IL23AQ9NPF7 189 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 SERPINB13Q9UIV8 391 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 LRRC37A2A6NM11 1700 aa12.61□□□□□ -0.39
SSX3-204ENST00000612497 MYO5AQ9Y4I1 1855 aaKnown RBP12.61□□□□□ -0.39
SSX3-204ENST00000612497 MOXD2PA6NHM9 499 aa12.6□□□□□ -0.39
SSX3-204ENST00000612497 TLL1O43897 1013 aa12.6□□□□□ -0.39
SSX3-204ENST00000612497 PGK2P07205 417 aa12.6□□□□□ -0.39
SSX3-204ENST00000612497 MRE11P49959 708 aa12.6□□□□□ -0.39
SSX3-204ENST00000612497 SAMD1Q6SPF0 538 aaPredicted RBP12.6□□□□□ -0.39
SSX3-204ENST00000612497 MB21D1Q8N884 522 aa12.6□□□□□ -0.39
SSX3-204ENST00000612497 KHSRPQ92945 711 aaKnown RBP eCLIP12.6□□□□□ -0.399e-8■□□□□ 8.2
SSX3-204ENST00000612497 MMP19Q99542 508 aa12.6□□□□□ -0.39
SSX3-204ENST00000612497 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
SSX3-204ENST00000612497 HDAC5Q9UQL6 1122 aa12.6□□□□□ -0.39
SSX3-204ENST00000612497 CNPY2Q9Y2B0 182 aa12.6□□□□□ -0.39
SSX3-204ENST00000612497 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.6□□□□□ -0.39
SSX3-204ENST00000612497 SYNRGQ9UMZ2 1314 aa12.6□□□□□ -0.39
SSX3-204ENST00000612497 A0A0G2JMZ2 1700 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 SMIM22K7EJ46 135 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 GTPBP6O43824 516 aaPredicted RBP12.59□□□□□ -0.39
SSX3-204ENST00000612497 UQCRFS1P1P0C7P4 283 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 ZNF865P0CJ78 1059 aaPredicted RBP12.59□□□□□ -0.39
SSX3-204ENST00000612497 MYOGP15173 224 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 CYP2C18P33260 490 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 USP5P45974 858 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 DYNLL1P63167 89 aaKnown RBP12.59□□□□□ -0.39
SSX3-204ENST00000612497 OTOP2Q7RTS6 562 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 KLHDC9Q8NEP7 349 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 SSH1Q8WYL5 1049 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 COG5Q9UP83 839 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 ELP1O95163 1332 aa12.59□□□□□ -0.39
SSX3-204ENST00000612497 ROBO3Q96MS0 1386 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 RFXAPO00287 272 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 TLR3O15455 904 aaKnown RBP12.58□□□□□ -0.4
SSX3-204ENST00000612497 FLOT1O75955 427 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 CDK7P50613 346 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 KCTD2Q14681 263 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 SEPT2Q15019 361 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 TTC6Q86TZ1 520 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 ATG4CQ96DT6 458 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 EHD4Q9H223 541 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 MTCH2Q9Y6C9 303 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 SLC4A7Q9Y6M7 1214 aa12.58□□□□□ -0.4
SSX3-204ENST00000612497 COL11A1P12107 1806 aaPredicted RBP12.58□□□□□ -0.4
SSX3-204ENST00000612497 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 MYADML2A6NDP7 307 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 PI4K2BG5E9Z4 385 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 ARVCFO00192 962 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 MPHOSPH10O00566 681 aaKnown RBP12.57□□□□□ -0.4
SSX3-204ENST00000612497 SRGAP3O43295 1099 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 SLC25A27O95847 323 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 GUCY1A2P33402 732 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 ZNF792Q3KQV3 632 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 CCSAPQ6IQ19 270 aaPredicted RBP12.57□□□□□ -0.4
SSX3-204ENST00000612497 FAM126BQ8IXS8 530 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 HLA-CQ95604 372 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 UIMC1Q96RL1 719 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 FAM184BQ9ULE4 1060 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 DIS3Q9Y2L1 958 aaKnown RBP12.57□□□□□ -0.4
SSX3-204ENST00000612497 PCDHA11Q9Y5I1 949 aa12.57□□□□□ -0.4
SSX3-204ENST00000612497 A0A0U1RQG5 324 aaPredicted RBP12.56□□□□□ -0.4
SSX3-204ENST00000612497 ASGR1P07306 291 aa12.56□□□□□ -0.4
SSX3-204ENST00000612497 C6orf222P0C671 652 aaPredicted RBP12.56□□□□□ -0.4
SSX3-204ENST00000612497 CYP7A1P22680 504 aa12.56□□□□□ -0.4
SSX3-204ENST00000612497 SHMT1P34896 483 aa12.56□□□□□ -0.4
SSX3-204ENST00000612497 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
SSX3-204ENST00000612497 TTC39AQ5SRH9 613 aa12.56□□□□□ -0.4
SSX3-204ENST00000612497 PCSK9Q8NBP7 692 aaKnown RBP12.56□□□□□ -0.4
SSX3-204ENST00000612497 CERS4Q9HA82 394 aa12.56□□□□□ -0.4
SSX3-204ENST00000612497 ZHX1Q9UKY1 873 aaPredicted RBP12.56□□□□□ -0.4
SSX3-204ENST00000612497 BRWD1Q9NSI6 2320 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 ZBBXA8MT70 800 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 PRR33A8MZF0 331 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 DUSP11O75319 330 aaKnown RBP12.55□□□□□ -0.4
SSX3-204ENST00000612497 POU3F3P20264 500 aaPredicted RBP12.55□□□□□ -0.4
SSX3-204ENST00000612497 TMEM132BQ14DG7 1078 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 GNASQ5JWF2 1037 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 KIAA1755Q5JYT7 1200 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 KRT40Q6A162 431 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 SPICE1Q8N0Z3 855 aa12.55□□□□□ -0.4
SSX3-204ENST00000612497 MIGA1Q8NAN2 632 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms