RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 LCORLQ8N3X6 602 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 CCDC150Q8NCX0 1101 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 ERO1AQ96HE7 468 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 SERTAD1Q9UHV2 236 aa12.12□□□□□ -0.47
PCDHGC3-202ENST00000611950 CYP2D7A0A087X1C5 515 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 SEC31AO94979 1220 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 UQCRFS1P1P0C7P4 283 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 HMGB2P26583 209 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 IRX1P78414 480 aaPredicted RBP12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 SSRP1Q08945 709 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 NTRK3Q16288 839 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 PRPF38AQ8NAV1 312 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 SPATA5Q8NB90 893 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 MAP3K14Q99558 947 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 MROH5Q6ZUA9 1318 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 PES1O00541 588 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 PPFIA2O75334 1257 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 MAGEA8P43361 318 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 SMARCC1Q92922 1105 aaPredicted RBP12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 CARD6Q9BX69 1037 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 IRX2Q9BZI1 471 aaPredicted RBP12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 RMI1Q9H9A7 625 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 SAMSN1Q9NSI8 373 aaKnown RBP12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 INTS13Q9NVM9 706 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 SLC4A4Q9Y6R1 1079 aa12.11□□□□□ -0.47
PCDHGC3-202ENST00000611950 HSPA6P17066 643 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 EIF5P55010 431 aaKnown RBP12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 ADCY2Q08462 1091 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 KRBA2Q6ZNG9 492 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 KRT222Q8N1A0 295 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 CXorf38Q8TB03 319 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 CABP5Q9NP86 173 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 NFE2L3Q9Y4A8 694 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 ARAP2Q8WZ64 1704 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 A0A0U1RQJ8 604 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 CDKL5O76039 1030 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 TOB1P50616 345 aaPredicted RBP12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 EVX2Q03828 476 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 MTF1Q14872 753 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 NOM1Q5C9Z4 860 aaKnown RBP12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 INTS5Q6P9B9 1019 aaKnown RBP12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 ATRIPQ8WXE1 791 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 IMPACTQ9P2X3 320 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 RESP18Q5W5W9 173 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 NAIF1Q69YI7 327 aaPredicted RBP12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 MCTP2Q6DN12 878 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 MFSD6Q6ZSS7 791 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 MPHOSPH8Q99549 860 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 VPS54Q9P1Q0 977 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 SUN2Q9UH99 717 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 HPSEQ9Y251 543 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 ECM29Q5VYK3 1845 aa12.1□□□□□ -0.47
PCDHGC3-202ENST00000611950 SLC5A1P13866 664 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 CLCN6P51797 869 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 ALX1Q15699 326 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 TOGARAM2Q6ZUX3 1019 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 NOSTRINQ8IVI9 506 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 DHX58Q96C10 678 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 FAXDC2Q96IV6 333 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 LRP2BPQ9P2M1 347 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 JAG2Q9Y219 1238 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 FRMD4BQ9Y2L6 1034 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 PCDHGA4Q9Y5G9 962 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 GSG1L2A8MUP6 293 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 POLR3GO15318 223 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 CCP110O43303 1012 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 MKRN3Q13064 507 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 RTN1Q16799 776 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 TTC31Q49AM3 519 aaPredicted RBP12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 SGMS1Q86VZ5 419 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 KRI1Q8N9T8 703 aaKnown RBP12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 TMEM87BQ96K49 555 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 WDR24Q96S15 920 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 GOPCQ9HD26 462 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 TUBE1Q9UJT0 475 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 MAN1B1Q9UKM7 699 aa12.09□□□□□ -0.47
PCDHGC3-202ENST00000611950 DOCK2Q92608 1830 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 COL4A1P02462 1669 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 TFRCP02786 760 aaKnown RBP12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 GNG11P61952 73 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 ETF1P62495 437 aaKnown RBP12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 WTAPQ15007 396 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 EARS2Q5JPH6 523 aaKnown RBP12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 EPSTI1Q96J88 318 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 CEP89Q96ST8 783 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 SLX1AQ9BQ83 275 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 WNT7AO00755 349 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 GNPATO15228 680 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 OATP04181 439 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 CRKLP46109 303 aaKnown RBP12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 SIK1P57059 783 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 MAP3K12Q12852 859 aa12.08□□□□□ -0.48
PCDHGC3-202ENST00000611950 POSTNQ15063 836 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms