RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 FLOT1O75955 427 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 NTSR2O95665 410 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 CETN2P41208 172 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 LINC00301Q8NCQ3 95 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 PCDHA5Q9Y5H7 936 aa8.16□□□□□ -1.1
CSDE1-218ENST00000610726 OR52Z1P0C646 297 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 RAPGEF1Q13905 1077 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 SF3B3Q15393 1217 aaKnown RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 HS1BP3Q53T59 392 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 KRBA2Q6ZNG9 492 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 USP37Q86T82 979 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 TBC1D5Q92609 795 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 SYMPKQ92797 1274 aaKnown RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 VTI1AQ96AJ9 217 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 BAG1Q99933 345 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 PAGR1Q9BTK6 254 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 CSRNP2Q9H175 543 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 FOXP1Q9H334 677 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 TDRD3Q9H7E2 651 aaKnown RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 KANSL2Q9H9L4 492 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 PI4KBQ9UBF8 816 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 MRVI1Q9Y6F6 885 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 PXDNQ92626 1479 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 AKR1B15C9JRZ8 316 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 EIF3JO75822 258 aaKnown RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 RPL13P26373 211 aaKnown RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 CHRNA5P30532 468 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 IRX3P78415 501 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 GPATCH4Q5T3I0 446 aaKnown RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 CRACR2AQ9BSW2 395 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 XPO4Q9C0E2 1151 aaKnown RBP8.15□□□□□ -1.1
CSDE1-218ENST00000610726 RCOR1Q9UKL0 485 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 GINS2Q9Y248 185 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 CSADQ9Y600 493 aa8.15□□□□□ -1.1
CSDE1-218ENST00000610726 FER1L4A9Z1Z3 1794 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 TESPA1A2RU30 521 aaPredicted RBP8.15□□□□□ -1.11
CSDE1-218ENST00000610726 GAS7O60861 476 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 MMP1P03956 469 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 UBXN2AP68543 259 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 CYP4A11Q02928 519 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 KIF5AQ12840 1032 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 RESTQ13127 1097 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 AOC3Q16853 763 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 RC3H1Q5TC82 1133 aaKnown RBP8.15□□□□□ -1.11
CSDE1-218ENST00000610726 SYT10Q6XYQ8 523 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 STAG1Q8WVM7 1258 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 NELFBQ8WX92 580 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 GTPBP4Q9BZE4 634 aaKnown RBP8.15□□□□□ -1.11
CSDE1-218ENST00000610726 POLR3EQ9NVU0 708 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 SWAP70Q9UH65 585 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 PAXBP1Q9Y5B6 917 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 TAF6LQ9Y6J9 622 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 UBN2Q6ZU65 1347 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 ARHGAP23Q9P227 1491 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 CETN3O15182 167 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 DESP17661 470 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 DALRD3Q5D0E6 543 aaKnown RBP8.15□□□□□ -1.11
CSDE1-218ENST00000610726 DCAF15Q66K64 600 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 DPY19L2Q6NUT2 758 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 INTS5Q6P9B9 1019 aaKnown RBP8.15□□□□□ -1.11
CSDE1-218ENST00000610726 CNGA4Q8IV77 575 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 MB21D2Q8IYB1 491 aaPredicted RBP8.15□□□□□ -1.11
CSDE1-218ENST00000610726 AMNQ9BXJ7 453 aa8.15□□□□□ -1.11
CSDE1-218ENST00000610726 ITSN1Q15811 1721 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 SORBS3O60504 671 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 CRKP46108 304 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 PODNQ7Z5L7 613 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 SULF1Q8IWU6 871 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 MYCT1Q8N699 235 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 ENAHQ8N8S7 591 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-218ENST00000610726 SRRTQ9BXP5 876 aaKnown RBP8.14□□□□□ -1.11
CSDE1-218ENST00000610726 PCDHB6Q9Y5E3 794 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 UTYO14607 1347 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 SLIT1O75093 1534 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 KDM6AO15550 1401 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-218ENST00000610726 CCDC172P0C7W6 258 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 HLTFQ14527 1009 aaKnown RBP eCLIP8.14□□□□□ -1.11
CSDE1-218ENST00000610726 ASPRV1Q53RT3 343 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 DGKHQ86XP1 1220 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 SMCR8Q8TEV9 937 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-218ENST00000610726 PRIMPOLQ96LW4 560 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 DHX36Q9H2U1 1008 aaKnown RBP8.14□□□□□ -1.11
CSDE1-218ENST00000610726 IVNS1ABPQ9Y6Y0 642 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 DCCP43146 1447 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 A0A1W2PQ27 194 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 A0A1W2PQ64 194 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 A0A1W2PQD8 194 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 COBLO75128 1261 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 NEFHP12036 1026 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 KRT9P35527 623 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 CIAPIN1Q6FI81 312 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 CTR9Q6PD62 1173 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 TAX1BP1Q86VP1 789 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 GRAMD1CQ8IYS0 662 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 TBCKQ8TEA7 893 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 DDX25Q9UHL0 483 aaKnown RBP8.14□□□□□ -1.11
CSDE1-218ENST00000610726 PCDHA4Q9UN74 947 aa8.14□□□□□ -1.11
CSDE1-218ENST00000610726 ZNF609O15014 1411 aa8.13□□□□□ -1.11
CSDE1-218ENST00000610726 GCOM1H8Y6P7 765 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-218ENST00000610726 KRT86O43790 486 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms