RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 PTPN21Q16825 1174 aa22.18■■□□□ 1.14
COL15A1-205ENST00000610452 PHKBQ93100 1093 aa22.18■■□□□ 1.14
COL15A1-205ENST00000610452 HVCN1Q96D96 273 aa22.18■■□□□ 1.14
COL15A1-205ENST00000610452 HNRNPCP07910 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
COL15A1-205ENST00000610452 NME8Q8N427 588 aa22.18■■□□□ 1.14
COL15A1-205ENST00000610452 SOWAHDA6NJG2 315 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 MYCNP04198 464 aaPredicted RBP22.17■■□□□ 1.14
COL15A1-205ENST00000610452 KRT5P13647 590 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 GGCXP38435 758 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 PTPROQ16827 1216 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 VSTM4Q8IW00 320 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 ARHGEF12Q9NZN5 1544 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 H7C1D1 291 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 FBXW10Q5XX13 1052 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 SLC30A9Q6PML9 568 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 BATF3Q9NR55 127 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 TRPA1O75762 1119 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 ACRBPQ8NEB7 543 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 RRP36Q96EU6 259 aaKnown RBP22.17■■□□□ 1.14
COL15A1-205ENST00000610452 PPP4R1Q8TF05 950 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 MSANTD4Q8NCY6 345 aa22.17■■□□□ 1.14
COL15A1-205ENST00000610452 TADA3O75528 432 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 ADCY8P40145 1251 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 NBPF6Q5VWK0 638 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 XAGE3Q8WTP9 111 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 NBPF4Q96M43 638 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 ATP8A1Q9Y2Q0 1164 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 A0A087WWV3 80 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 SART1O43290 800 aaKnown RBP22.16■■□□□ 1.14
COL15A1-205ENST00000610452 LIN9Q5TKA1 542 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 SLF2Q8IX21 1173 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 U2AF1L4Q8WU68 220 aaKnown RBP22.16■■□□□ 1.14
COL15A1-205ENST00000610452 FOXO3O43524 673 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 LMNAP02545 664 aaKnown RBP22.16■■□□□ 1.14
COL15A1-205ENST00000610452 PDE6BP35913 854 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 COPB1P53618 953 aaKnown RBP22.16■■□□□ 1.14
COL15A1-205ENST00000610452 MTHFSDQ2M296 383 aaKnown RBP22.16■■□□□ 1.14
COL15A1-205ENST00000610452 DTNBP1Q96EV8 351 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 APOEP02649 317 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 FGD4Q96M96 766 aa22.16■■□□□ 1.14
COL15A1-205ENST00000610452 CALUO43852 315 aaPredicted RBP22.15■■□□□ 1.14
COL15A1-205ENST00000610452 CCT6BQ92526 530 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 TYW1Q9NV66 732 aaKnown RBP22.15■■□□□ 1.14
COL15A1-205ENST00000610452 TRIM35Q9UPQ4 493 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 PDCD2Q16342 344 aaPredicted RBP22.15■■□□□ 1.14
COL15A1-205ENST00000610452 SARM1Q6SZW1 724 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 ADAT2Q7Z6V5 191 aaKnown RBP22.15■■□□□ 1.14
COL15A1-205ENST00000610452 TUBB6Q9BUF5 446 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 LSM14BQ9BX40 385 aaKnown RBP22.15■■□□□ 1.14
COL15A1-205ENST00000610452 OSBPL1AQ9BXW6 950 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 NPC1L1Q9UHC9 1359 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 hCG_2014768A0A024R1R8 64 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.15■■□□□ 1.14
COL15A1-205ENST00000610452 ECM2O94769 699 aaPredicted RBP22.15■■□□□ 1.14
COL15A1-205ENST00000610452 CHGBP05060 677 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 RCN2Q14257 317 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 ARHGEF18Q6ZSZ5 1173 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 COPS6Q7L5N1 327 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 ELAC2Q9BQ52 826 aaKnown RBP22.15■■□□□ 1.14
COL15A1-205ENST00000610452 PCDHA5Q9Y5H7 936 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 SNRPA1P09661 255 aaKnown RBP22.15■■□□□ 1.14
COL15A1-205ENST00000610452 DHX9Q08211 1270 aaKnown RBP22.15■■□□□ 1.14
COL15A1-205ENST00000610452 PLS1Q14651 629 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 ATP2A3Q93084 1043 aa22.15■■□□□ 1.14
COL15A1-205ENST00000610452 PHBP35232 272 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 CWF19L2Q2TBE0 894 aaKnown RBP22.14■■□□□ 1.14
COL15A1-205ENST00000610452 ANKRD20A4Q4UJ75 823 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 ANKRD20A8PQ5CZ79 823 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 ANKRD20A2Q5SQ80 823 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 ANKRD20A1Q5TYW2 823 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 GRAMD4Q6IC98 578 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 CTAGE3PQ8IX95 158 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 FNBP4Q8N3X1 1017 aaPredicted RBP22.14■■□□□ 1.14
COL15A1-205ENST00000610452 THOC1Q96FV9 657 aaKnown RBP22.14■■□□□ 1.14
COL15A1-205ENST00000610452 DYDC2Q96IM9 177 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 PIP4K2CQ8TBX8 421 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 KCNV2Q8TDN2 545 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 KCNJ14Q9UNX9 436 aa22.14■■□□□ 1.14
COL15A1-205ENST00000610452 V9GY48 417 aaPredicted RBP22.14■■□□□ 1.14
COL15A1-205ENST00000610452 WDR78Q5VTH9 848 aa22.14■■□□□ 1.13
COL15A1-205ENST00000610452 ARHGAP18Q8N392 663 aa22.14■■□□□ 1.13
COL15A1-205ENST00000610452 PFDN4Q9NQP4 134 aa22.14■■□□□ 1.13
COL15A1-205ENST00000610452 CD109Q6YHK3 1445 aa22.14■■□□□ 1.13
COL15A1-205ENST00000610452 EIF4E1BA6NMX2 242 aaKnown RBP22.14■■□□□ 1.13
COL15A1-205ENST00000610452 H0Y3Z8 333 aa22.14■■□□□ 1.13
COL15A1-205ENST00000610452 CRCPO75575 148 aa22.14■■□□□ 1.13
COL15A1-205ENST00000610452 GCFC2P16383 781 aaKnown RBP22.14■■□□□ 1.13
COL15A1-205ENST00000610452 ST5P78524 1137 aa22.14■■□□□ 1.13
COL15A1-205ENST00000610452 MRPL46Q9H2W6 279 aaKnown RBP22.14■■□□□ 1.13
COL15A1-205ENST00000610452 TMOD2Q9NZR1 351 aa22.14■■□□□ 1.13
COL15A1-205ENST00000610452 G2E3Q7L622 706 aa22.13■■□□□ 1.13
COL15A1-205ENST00000610452 PALM2Q8IXS6 379 aa22.13■■□□□ 1.13
COL15A1-205ENST00000610452 GRK7Q8WTQ7 553 aa22.13■■□□□ 1.13
COL15A1-205ENST00000610452 ANKIB1Q9P2G1 1089 aa22.13■■□□□ 1.13
COL15A1-205ENST00000610452 RNF14Q9UBS8 474 aa22.13■■□□□ 1.13
COL15A1-205ENST00000610452 PNMA6EA0A0J9YXQ4 647 aa22.13■■□□□ 1.13
COL15A1-205ENST00000610452 MSH2P43246 934 aa22.13■■□□□ 1.13
COL15A1-205ENST00000610452 PCYT1AP49585 367 aa22.13■■□□□ 1.13
COL15A1-205ENST00000610452 MUM1L1Q5H9M0 696 aa22.13■■□□□ 1.13
COL15A1-205ENST00000610452 SLFN14P0C7P3 912 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms