RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 TNKSO95271 1327 aa17.62■□□□□ 0.41
CSNK2A1-209ENST00000609606 A0A0G2JMZ2 1700 aa17.61■□□□□ 0.41
CSNK2A1-209ENST00000609606 RAD21O60216 631 aa17.61■□□□□ 0.41
CSNK2A1-209ENST00000609606 MCM5P33992 734 aa17.61■□□□□ 0.41
CSNK2A1-209ENST00000609606 SART3Q15020 963 aaKnown RBP17.61■□□□□ 0.41
CSNK2A1-209ENST00000609606 FAM110CQ1W6H9 321 aa17.61■□□□□ 0.41
CSNK2A1-209ENST00000609606 FAM83BQ5T0W9 1011 aa17.61■□□□□ 0.41
CSNK2A1-209ENST00000609606 MORF4L1Q9UBU8 362 aa17.61■□□□□ 0.41
CSNK2A1-209ENST00000609606 CPA4Q9UI42 421 aa17.61■□□□□ 0.41
CSNK2A1-209ENST00000609606 MGAMO43451 1857 aa17.61■□□□□ 0.41
CSNK2A1-209ENST00000609606 SPDYE16A6NNV3 312 aaPredicted RBP17.6■□□□□ 0.41
CSNK2A1-209ENST00000609606 FLOT1O75955 427 aa17.6■□□□□ 0.41
CSNK2A1-209ENST00000609606 ANTXR2P58335 489 aa17.6■□□□□ 0.41
CSNK2A1-209ENST00000609606 DCAF4Q8WV16 495 aa17.6■□□□□ 0.41
CSNK2A1-209ENST00000609606 NEK1Q96PY6 1258 aa17.6■□□□□ 0.41
CSNK2A1-209ENST00000609606 WDR19Q8NEZ3 1342 aa17.6■□□□□ 0.41
CSNK2A1-209ENST00000609606 COL11A1P12107 1806 aaPredicted RBP17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 ERICH2A1L162 156 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 IFIT3O14879 490 aaKnown RBP17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 PLA2G6O60733 806 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 HMGB1P09429 215 aaKnown RBP17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 BMP3P12645 472 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 MCCP23508 829 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 DSG3P32926 999 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 SLC1A4P43007 532 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 IFIT1BQ5T764 474 aaKnown RBP17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 ANKRD13CQ8N6S4 541 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 MB21D1Q8N884 522 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 PNMA1Q8ND90 353 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 IGDCC4Q8TDY8 1250 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 ERO1AQ96HE7 468 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 TMEM87BQ96K49 555 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 NUP88Q99567 741 aaPredicted RBP17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 KAT14Q9H8E8 782 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 FEM1BQ9UK73 627 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 PPP1R9AQ9ULJ8 1098 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 ADAMTS5Q9UNA0 930 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 RABGAP1Q9Y3P9 1069 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 SNX14Q9Y5W7 946 aa17.59■□□□□ 0.41
CSNK2A1-209ENST00000609606 PRC1O43663 620 aa17.58■□□□□ 0.4
CSNK2A1-209ENST00000609606 SNHG28P0DPA3 235 aa17.58■□□□□ 0.4
CSNK2A1-209ENST00000609606 PDHBP11177 359 aa17.58■□□□□ 0.4
CSNK2A1-209ENST00000609606 LACTBP83111 547 aaPredicted RBP17.58■□□□□ 0.4
CSNK2A1-209ENST00000609606 ADCK5Q3MIX3 580 aa17.58■□□□□ 0.4
CSNK2A1-209ENST00000609606 POTEEQ6S8J3 1075 aa17.58■□□□□ 0.4
CSNK2A1-209ENST00000609606 SLF1Q9BQI6 1058 aa17.58■□□□□ 0.4
CSNK2A1-209ENST00000609606 RBPJLQ9UBG7 517 aa17.58■□□□□ 0.4
CSNK2A1-209ENST00000609606 KIF22Q14807 665 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 WTAPQ15007 396 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 ARHGEF6Q15052 776 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 TMEM67Q5HYA8 995 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 DHX32Q7L7V1 743 aaKnown RBP17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 CHST3Q7LGC8 479 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 FAM160B2Q86V87 743 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 TMTC2Q8N394 836 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 PRPF38AQ8NAV1 312 aaKnown RBP17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 GPRC5AQ8NFJ5 357 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 CHURC1Q8WUH1 139 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 TXNRD2Q9NNW7 524 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 FBXO28Q9NVF7 368 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 DOCK3Q8IZD9 2030 aa17.57■□□□□ 0.4
CSNK2A1-209ENST00000609606 PSMA5P28066 241 aa17.56■□□□□ 0.4
CSNK2A1-209ENST00000609606 LIFRP42702 1097 aa17.56■□□□□ 0.4
CSNK2A1-209ENST00000609606 STAT2P52630 851 aa17.56■□□□□ 0.4
CSNK2A1-209ENST00000609606 ERVK-9P63128 1117 aa17.56■□□□□ 0.4
CSNK2A1-209ENST00000609606 ERVK-24P63145 666 aa17.56■□□□□ 0.4
CSNK2A1-209ENST00000609606 EXOSC10Q01780 885 aaKnown RBP17.56■□□□□ 0.4
CSNK2A1-209ENST00000609606 COL9A3Q14050 684 aaPredicted RBP17.56■□□□□ 0.4
CSNK2A1-209ENST00000609606 LY9Q9HBG7 655 aa17.56■□□□□ 0.4
CSNK2A1-209ENST00000609606 TMEM232C9JQI7 657 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 VWA5AO00534 786 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 SH2B2O14492 632 aaPredicted RBP17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 CNMDO75829 334 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 GNRH1P01148 92 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 FDX1P10109 184 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 ANAPC15P60006 121 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 ZNF543Q08ER8 600 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 CCDC96Q2M329 555 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 GPATCH4Q5T3I0 446 aaKnown RBP17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 BTNL9Q6UXG8 535 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 CD99L2Q8TCZ2 262 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 ATG4CQ96DT6 458 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 IL17RAQ96F46 866 aa17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 JAKMIP1Q96N16 626 aaKnown RBP17.55■□□□□ 0.4
CSNK2A1-209ENST00000609606 ZSWIM8A7E2V4 1837 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 SEC24BO95487 1268 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 CCNA1P78396 465 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 ASPRV1Q53RT3 343 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 KCTD1Q719H9 257 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 RASGRP2Q7LDG7 609 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 CTU1Q7Z7A3 348 aaKnown RBP17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 PAGR1Q9BTK6 254 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 TM6SF1Q9BZW5 370 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 SENP2Q9HC62 589 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 BTBD7Q9P203 1132 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 MTMR7Q9Y216 660 aa17.54■□□□□ 0.4
CSNK2A1-209ENST00000609606 PSMC4P43686 418 aa17.53■□□□□ 0.4
CSNK2A1-209ENST00000609606 FCGRTP55899 365 aa17.53■□□□□ 0.4
CSNK2A1-209ENST00000609606 Q3C1V9 767 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms