RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 CDC45O75419 566 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 CNMDO75829 334 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 TOP1P11387 765 aaKnown RBP16.83■□□□□ 0.28
HDDC2-209ENST00000609477 PTH1RQ03431 593 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 TRDNQ13061 729 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 Q3C1V9 767 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 SLC9C1Q4G0N8 1177 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 FAM83BQ5T0W9 1011 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 SLFN13Q68D06 897 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 RCSD1Q6JBY9 416 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 POTEEQ6S8J3 1075 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 SHCBP1Q8NEM2 672 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 PXYLP1Q8TE99 480 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 SOCS4Q8WXH5 440 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 PPP1R9AQ9ULJ8 1098 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 PTCH2Q9Y6C5 1203 aa16.83■□□□□ 0.28
HDDC2-209ENST00000609477 NEDD4P46934 1319 aa16.82■□□□□ 0.28
HDDC2-209ENST00000609477 BMP3P12645 472 aa16.82■□□□□ 0.28
HDDC2-209ENST00000609477 COPB2P35606 906 aa16.82■□□□□ 0.28
HDDC2-209ENST00000609477 PRKCZQ05513 592 aa16.82■□□□□ 0.28
HDDC2-209ENST00000609477 SLAIN1Q8ND83 568 aa16.82■□□□□ 0.28
HDDC2-209ENST00000609477 CHURC1Q8WUH1 139 aa16.82■□□□□ 0.28
HDDC2-209ENST00000609477 ANKS1AQ92625 1134 aa16.82■□□□□ 0.28
HDDC2-209ENST00000609477 SLF1Q9BQI6 1058 aa16.82■□□□□ 0.28
HDDC2-209ENST00000609477 BTBD7Q9P203 1132 aa16.82■□□□□ 0.28
HDDC2-209ENST00000609477 HTTP42858 3142 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 CCDC85CA6NKD9 419 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 VWA5AO00534 786 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 STRNO43815 780 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 NMT2O60551 498 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 KDM4AO75164 1064 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 SLC25A27O95847 323 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 CYP21A2P08686 494 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 SLC1A4P43007 532 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 FLT3LGP49771 235 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 FAM160B2Q86V87 743 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 SKAP1Q86WV1 359 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 TRMT44Q8IYL2 757 aaKnown RBP16.81■□□□□ 0.28
HDDC2-209ENST00000609477 LRRC47Q8N1G4 583 aaKnown RBP16.81■□□□□ 0.28
HDDC2-209ENST00000609477 DCAF4Q8WV16 495 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 SPATC1LQ9H0A9 340 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 MROH8Q9H579 483 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 ZSWIM5Q9P217 1185 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 GJD2Q9UKL4 321 aa16.81■□□□□ 0.28
HDDC2-209ENST00000609477 ATP2A1O14983 1001 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 XRCC5P13010 732 aaKnown RBP16.8■□□□□ 0.28
HDDC2-209ENST00000609477 GRK4P32298 578 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 STAT2P52630 851 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 GPR142Q7Z601 462 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 PLEKHH3Q7Z736 793 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 ATG4CQ96DT6 458 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 ZSCAN10Q96SZ4 725 aaPredicted RBP16.8■□□□□ 0.28
HDDC2-209ENST00000609477 NUDT12Q9BQG2 462 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 TMEM47Q9BQJ4 181 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 LSG1Q9H089 658 aaKnown RBP16.8■□□□□ 0.28
HDDC2-209ENST00000609477 PORCNQ9H237 461 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 CWC22Q9HCG8 908 aaKnown RBP16.8■□□□□ 0.28
HDDC2-209ENST00000609477 GABRQQ9UN88 632 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 IVNS1ABPQ9Y6Y0 642 aa16.8■□□□□ 0.28
HDDC2-209ENST00000609477 B4E1Z4 1266 aa16.79■□□□□ 0.28
HDDC2-209ENST00000609477 OAZ1P54368 228 aa16.79■□□□□ 0.28
HDDC2-209ENST00000609477 ABRAQ8N0Z2 381 aa16.79■□□□□ 0.28
HDDC2-209ENST00000609477 NCOA7Q8NI08 942 aa16.79■□□□□ 0.28
HDDC2-209ENST00000609477 ZNF333Q96JL9 665 aa16.79■□□□□ 0.28
HDDC2-209ENST00000609477 NUP88Q99567 741 aaPredicted RBP16.79■□□□□ 0.28
HDDC2-209ENST00000609477 MOV10L1Q9BXT6 1211 aaKnown RBP16.79■□□□□ 0.28
HDDC2-209ENST00000609477 ANO2Q9NQ90 1003 aa16.79■□□□□ 0.28
HDDC2-209ENST00000609477 FBXO28Q9NVF7 368 aa16.79■□□□□ 0.28
HDDC2-209ENST00000609477 RBM8AQ9Y5S9 174 aaKnown RBP16.79■□□□□ 0.28
HDDC2-209ENST00000609477 DOCK3Q8IZD9 2030 aa16.79■□□□□ 0.28
HDDC2-209ENST00000609477 SLC15A5A6NIM6 579 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 TMEM232C9JQI7 657 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 ADCY3O60266 1144 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 ZBED4O75132 1171 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 CAPN2P17655 700 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 MCCP23508 829 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 UBXN2AP68543 259 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 TMEM132BQ14DG7 1078 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 MORN1Q5T089 497 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 RNF20Q5VTR2 975 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 RALYLQ86SE5 291 aaKnown RBP16.78■□□□□ 0.28
HDDC2-209ENST00000609477 RIOX2Q8IUF8 465 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 USP6NLQ92738 828 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 UBAC1Q9BSL1 405 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 MTA3Q9BTC8 594 aa16.78■□□□□ 0.28
HDDC2-209ENST00000609477 ZNF214Q9UL59 606 aaPredicted RBP16.78■□□□□ 0.28
HDDC2-209ENST00000609477 E7EWF7 191 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 ECM2O94769 699 aaPredicted RBP16.77■□□□□ 0.28
HDDC2-209ENST00000609477 SNHG28P0DPA3 235 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 PTPREP23469 700 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 STAT3P40763 770 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 RGS2P41220 211 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 PLS1Q14651 629 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 NECTIN1Q15223 517 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 GPATCH4Q5T3I0 446 aaKnown RBP16.77■□□□□ 0.28
HDDC2-209ENST00000609477 BTNL9Q6UXG8 535 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 REPS2Q8NFH8 660 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 TEX13BQ9BXU2 312 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 SLC38A10Q9HBR0 1119 aa16.77■□□□□ 0.28
HDDC2-209ENST00000609477 CTDP1Q9Y5B0 961 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms