RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 WWC2Q6AWC2 1192 aa13.09□□□□□ -0.31
LINC01278-204ENST00000609143 USP17L2Q6R6M4 530 aa13.09□□□□□ -0.31
LINC01278-204ENST00000609143 ERCC4Q92889 916 aaPredicted RBP13.09□□□□□ -0.31
LINC01278-204ENST00000609143 FERMT2Q96AC1 680 aa13.09□□□□□ -0.31
LINC01278-204ENST00000609143 RRP36Q96EU6 259 aaKnown RBP13.09□□□□□ -0.31
LINC01278-204ENST00000609143 SEC63Q9UGP8 760 aaKnown RBP13.09□□□□□ -0.31
LINC01278-204ENST00000609143 HOOK1Q9UJC3 728 aaKnown RBP13.09□□□□□ -0.31
LINC01278-204ENST00000609143 DPEP1P16444 411 aa13.09□□□□□ -0.31
LINC01278-204ENST00000609143 ASPRV1Q53RT3 343 aa13.09□□□□□ -0.31
LINC01278-204ENST00000609143 DAGLBQ8NCG7 672 aa13.09□□□□□ -0.31
LINC01278-204ENST00000609143 PCDHAC2Q9Y5I4 1007 aa13.09□□□□□ -0.31
LINC01278-204ENST00000609143 YDJCA8MPS7 323 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 STXBP3O00186 592 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 PDHBP11177 359 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 MSNP26038 577 aaKnown RBP13.08□□□□□ -0.32
LINC01278-204ENST00000609143 CACNB3P54284 484 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 TCP10Q12799 353 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 KRBA2Q6ZNG9 492 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 CNNM3Q8NE01 707 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 TRIM34Q9BYJ4 488 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 PI4KBQ9UBF8 816 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 PSME4Q14997 1843 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 USP17L5A8MUK1 530 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 BECN2A8MW95 431 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 MPHOSPH10O00566 681 aaKnown RBP13.08□□□□□ -0.32
LINC01278-204ENST00000609143 GRIN1Q05586 938 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 IQCB1Q15051 598 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 ZNF174Q15697 407 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 NOM1Q5C9Z4 860 aaKnown RBP13.08□□□□□ -0.32
LINC01278-204ENST00000609143 SPECC1Q5M775 1068 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 RASGRP2Q7LDG7 609 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 ZSCAN29Q8IWY8 852 aaPredicted RBP13.08□□□□□ -0.32
LINC01278-204ENST00000609143 ZFPM1Q8IX07 1006 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 ELOA2Q8IYF1 753 aaPredicted RBP13.08□□□□□ -0.32
LINC01278-204ENST00000609143 LRRC47Q8N1G4 583 aaKnown RBP13.08□□□□□ -0.32
LINC01278-204ENST00000609143 CLIP2Q9UDT6 1046 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 FAM198AQ9UFP1 575 aa13.08□□□□□ -0.32
LINC01278-204ENST00000609143 CCDC194A0A1B0GVG4 234 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 CFAP100Q494V2 611 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 SOGA3Q5TF21 947 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 LARGE2Q8N3Y3 721 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 CSRNP2Q9H175 543 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 KIF13BQ9NQT8 1826 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 GREB1LQ9C091 1923 aaPredicted RBP13.07□□□□□ -0.32
LINC01278-204ENST00000609143 AP5Z1O43299 807 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 NAPAP54920 295 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 EIF6P56537 245 aaKnown RBP13.07□□□□□ -0.32
LINC01278-204ENST00000609143 NLRP12P59046 1061 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 ATP2C1P98194 919 aaPredicted RBP13.07□□□□□ -0.32
LINC01278-204ENST00000609143 LONRF3Q496Y0 759 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 TYW1BQ6NUM6 668 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
LINC01278-204ENST00000609143 hCG_1984214I3L0E3 225 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 ENTPD3O75355 529 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 KCNA3P22001 575 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 RSBN1LQ6PCB5 846 aaPredicted RBP13.06□□□□□ -0.32
LINC01278-204ENST00000609143 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 FOXP4Q8IVH2 680 aaPredicted RBP13.06□□□□□ -0.32
LINC01278-204ENST00000609143 ZNF713Q8N859 430 aaPredicted RBP13.06□□□□□ -0.32
LINC01278-204ENST00000609143 CCDC34Q96HJ3 373 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 CPVLQ9H3G5 476 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 RIOX1Q9H6W3 641 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 TUBE1Q9UJT0 475 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 SIPA1L1O43166 1804 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 DDTLA6NHG4 134 aaPredicted RBP13.06□□□□□ -0.32
LINC01278-204ENST00000609143 CLCN1P35523 988 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 PTGDRQ13258 359 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 CLEC10AQ8IUN9 316 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 BPIFA3Q9BQP9 254 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 TDRD3Q9H7E2 651 aaKnown RBP13.06□□□□□ -0.32
LINC01278-204ENST00000609143 C6orf50Q9HD87 102 aa13.06□□□□□ -0.32
LINC01278-204ENST00000609143 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
LINC01278-204ENST00000609143 A0A087WWV3 80 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 M0R2N6 131 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 WNT7AO00755 349 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 POLR2DO15514 142 aaKnown RBP13.05□□□□□ -0.32
LINC01278-204ENST00000609143 GNA11P29992 359 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 DPCR1Q3MIW9 517 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 METTL16Q86W50 562 aaKnown RBP13.05□□□□□ -0.32
LINC01278-204ENST00000609143 DNAJC18Q9H819 358 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 VAT1LQ9HCJ6 419 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 TMOD2Q9NZR1 351 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 HDAC9Q9UKV0 1011 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 ZKSCAN5Q9Y2L8 839 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 COL2A1P02458 1487 aaPredicted RBP13.05□□□□□ -0.32
LINC01278-204ENST00000609143 GOLGA6L6A8MZA4 724 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 BIN1O00499 593 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 MCM7P33993 719 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 ATP2B2Q01814 1243 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 PNOCQ13519 176 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 CERKLQ49MI3 558 aaPredicted RBP13.05□□□□□ -0.32
LINC01278-204ENST00000609143 CCDC125Q86Z20 511 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 PIGSQ96S52 555 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 TRIM5Q9C035 493 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 UBA5Q9GZZ9 404 aa13.05□□□□□ -0.32
LINC01278-204ENST00000609143 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
LINC01278-204ENST00000609143 PCDHA6Q9UN73 950 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms