RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 GRM4Q14833 912 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 ANKRD1Q15327 319 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 CCDC96Q2M329 555 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 TREML2Q5T2D2 321 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 GPAT2Q6NUI2 795 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 BRI3BPQ8WY22 251 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 CAPNS2Q96L46 248 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 C12orf42Q96LP6 360 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 SH2D4AQ9H788 454 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 FBXO28Q9NVF7 368 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 LIMCH1Q9UPQ0 1083 aa11.99□□□□□ -0.49
ITGB5-211ENST00000608107 CCL15-CCL14A0A0B4J2E2 113 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 GOLGA8AA7E2F4 631 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 PPFIA3O75145 1194 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 DDAH1O94760 285 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 BMP3P12645 472 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 VCAM1P19320 739 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 ADD1P35611 737 aaKnown RBP11.98□□□□□ -0.49
ITGB5-211ENST00000608107 SLC16A2P36021 539 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 GTF2A2P52657 109 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 USP14P54578 494 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 CCL15Q16663 113 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 SLC35G1Q2M3R5 365 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 SYNE3Q6ZMZ3 975 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 NBPF11Q86T75 865 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 CMTR1Q8N1G2 835 aaKnown RBP11.98□□□□□ -0.49
ITGB5-211ENST00000608107 FANCBQ8NB91 859 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 DCAF4Q8WV16 495 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 CCDC102AQ96A19 550 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 ZNF274Q96GC6 653 aaPredicted RBP11.98□□□□□ -0.49
ITGB5-211ENST00000608107 GMCL1Q96IK5 515 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 PTPN18Q99952 460 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 UBA5Q9GZZ9 404 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 RPAP3Q9H6T3 665 aaPredicted RBP11.98□□□□□ -0.49
ITGB5-211ENST00000608107 TMOD4Q9NZQ9 345 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 MAD2L2Q9UI95 211 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 ISY1Q9ULR0 285 aaKnown RBP11.98□□□□□ -0.49
ITGB5-211ENST00000608107 SYNPO2Q9UMS6 1093 aa11.98□□□□□ -0.49
ITGB5-211ENST00000608107 PALM3A6NDB9 673 aaPredicted RBP11.97□□□□□ -0.49
ITGB5-211ENST00000608107 BTBD19C9JJ37 291 aa11.97□□□□□ -0.49
ITGB5-211ENST00000608107 PLEKHA8P1O95397 391 aa11.97□□□□□ -0.49
ITGB5-211ENST00000608107 PARP1P09874 1014 aaKnown RBP11.97□□□□□ -0.49
ITGB5-211ENST00000608107 HSPA6P17066 643 aa11.97□□□□□ -0.49
ITGB5-211ENST00000608107 SLC1A4P43007 532 aa11.97□□□□□ -0.49
ITGB5-211ENST00000608107 VEGFBP49765 207 aa11.97□□□□□ -0.49
ITGB5-211ENST00000608107 METAP2P50579 478 aaKnown RBP eCLIP11.97□□□□□ -0.49
ITGB5-211ENST00000608107 KIF23Q02241 960 aaPredicted RBP11.97□□□□□ -0.49
ITGB5-211ENST00000608107 SCRN1Q12765 414 aa11.97□□□□□ -0.49
ITGB5-211ENST00000608107 RTN1Q16799 776 aa11.97□□□□□ -0.49
ITGB5-211ENST00000608107 SAMD1Q6SPF0 538 aaPredicted RBP11.97□□□□□ -0.49
ITGB5-211ENST00000608107 LPAR1Q92633 364 aa11.97□□□□□ -0.49
ITGB5-211ENST00000608107 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
ITGB5-211ENST00000608107 SLKQ9H2G2 1235 aaPredicted RBP11.97□□□□□ -0.49
ITGB5-211ENST00000608107 TMEM232C9JQI7 657 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 IGF2BP3O00425 579 aaKnown RBP eCLIP11.96□□□□□ -0.49
ITGB5-211ENST00000608107 WDR46O15213 610 aaKnown RBP11.96□□□□□ -0.49
ITGB5-211ENST00000608107 PFKFB2O60825 505 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 CALM1P0DP23 149 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 CALM2P0DP24 149 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 CALM3P0DP25 149 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 CETPP11597 493 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 SNAP25P60880 206 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 CATSPERGQ6ZRH7 1159 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 CCDC83Q8IWF9 413 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 FAM43AQ8N2R8 423 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 CCDC82Q8N4S0 544 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 SRBD1Q8N5C6 995 aaKnown RBP11.96□□□□□ -0.49
ITGB5-211ENST00000608107 PROCA1Q8NCQ7 364 aaPredicted RBP11.96□□□□□ -0.49
ITGB5-211ENST00000608107 CTCFLQ8NI51 663 aaPredicted RBP11.96□□□□□ -0.49
ITGB5-211ENST00000608107 SNX21Q969T3 373 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 TANGO6Q9C0B7 1094 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 AGTPBP1Q9UPW5 1226 aa11.96□□□□□ -0.49
ITGB5-211ENST00000608107 RBM19Q9Y4C8 960 aaKnown RBP11.96□□□□□ -0.49
ITGB5-211ENST00000608107 NID2Q14112 1375 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 WDR33Q9C0J8 1336 aaKnown RBP11.95□□□□□ -0.5
ITGB5-211ENST00000608107 TESPA1A2RU30 521 aaPredicted RBP11.95□□□□□ -0.5
ITGB5-211ENST00000608107 MANSC4A6NHS7 340 aaPredicted RBP11.95□□□□□ -0.5
ITGB5-211ENST00000608107 USP17L15C9J2P7 530 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 USP17L13C9JLJ4 530 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 USP17L11C9JVI0 530 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 KLRF2D3W0D1 207 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 USP17L18D6R9N7 530 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 USP17L22D6RA61 530 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 USP17L17D6RBQ6 530 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 USP17L19D6RCP7 530 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 USP17L20D6RJB6 530 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 CYTH3O43739 400 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 PEX10O60683 326 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 CTDNEP1O95476 244 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 USP17L24Q0WX57 530 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 ASPRV1Q53RT3 343 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 POTEEQ6S8J3 1075 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 FASTKD5Q7L8L6 764 aaKnown RBP11.95□□□□□ -0.5
ITGB5-211ENST00000608107 PIBF1Q8WXW3 757 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 ZSCAN31Q96LW9 406 aaPredicted RBP11.95□□□□□ -0.5
ITGB5-211ENST00000608107 MAP3K14Q99558 947 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 VAT1LQ9HCJ6 419 aa11.95□□□□□ -0.5
ITGB5-211ENST00000608107 hCG_1642624A0A1W2PR95 340 aa11.94□□□□□ -0.5
ITGB5-211ENST00000608107 K7ELQ4 463 aaPredicted RBP11.94□□□□□ -0.5
ITGB5-211ENST00000608107 PDHXO00330 501 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms