RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 ADGRA2Q96PE1 1338 aa16.73■□□□□ 0.27
CTSA-219ENST00000607841 BCRP11274 1271 aa16.73■□□□□ 0.27
CTSA-219ENST00000607841 FAM110CQ1W6H9 321 aa16.73■□□□□ 0.27
CTSA-219ENST00000607841 LBX2Q6XYB7 198 aa16.73■□□□□ 0.27
CTSA-219ENST00000607841 RASEFQ8IZ41 740 aa16.73■□□□□ 0.27
CTSA-219ENST00000607841 ANKRD13CQ8N6S4 541 aa16.73■□□□□ 0.27
CTSA-219ENST00000607841 FEM1BQ9UK73 627 aa16.73■□□□□ 0.27
CTSA-219ENST00000607841 ISY1Q9ULR0 285 aaKnown RBP16.73■□□□□ 0.27
CTSA-219ENST00000607841 PRC1O43663 620 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 PSMA5P28066 241 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 DSG3P32926 999 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 WTAPQ15007 396 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 SEC23AQ15436 765 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 TMEM67Q5HYA8 995 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 CHST3Q7LGC8 479 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 TMTC2Q8N394 836 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 PNMA1Q8ND90 353 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 GPRC5AQ8NFJ5 357 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 CHURC1Q8WUH1 139 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 TMEM87BQ96K49 555 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 NUP88Q99567 741 aaPredicted RBP16.72■□□□□ 0.27
CTSA-219ENST00000607841 RABGAP1Q9Y3P9 1069 aa16.72■□□□□ 0.27
CTSA-219ENST00000607841 PTPRFP10586 1907 aa16.71■□□□□ 0.27
CTSA-219ENST00000607841 SPDYE16A6NNV3 312 aaPredicted RBP16.71■□□□□ 0.27
CTSA-219ENST00000607841 DHX32Q7L7V1 743 aaKnown RBP16.71■□□□□ 0.27
CTSA-219ENST00000607841 FAM160B2Q86V87 743 aa16.71■□□□□ 0.27
CTSA-219ENST00000607841 PRPF38AQ8NAV1 312 aaKnown RBP16.71■□□□□ 0.27
CTSA-219ENST00000607841 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.27
CTSA-219ENST00000607841 MORF4L1Q9UBU8 362 aa16.71■□□□□ 0.27
CTSA-219ENST00000607841 PPP1R9AQ9ULJ8 1098 aa16.71■□□□□ 0.27
CTSA-219ENST00000607841 MTMR7Q9Y216 660 aa16.71■□□□□ 0.27
CTSA-219ENST00000607841 SNX14Q9Y5W7 946 aa16.71■□□□□ 0.27
CTSA-219ENST00000607841 WDR19Q8NEZ3 1342 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 TMEM232C9JQI7 657 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 PLA2G6O60733 806 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 PDHBP11177 359 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 STAT2P52630 851 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 ANTXR2P58335 489 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 CCNA1P78396 465 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 LACTBP83111 547 aaPredicted RBP16.7■□□□□ 0.26
CTSA-219ENST00000607841 IKQ13123 557 aaPredicted RBP16.7■□□□□ 0.26
CTSA-219ENST00000607841 CCDC96Q2M329 555 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
CTSA-219ENST00000607841 IGDCC4Q8TDY8 1250 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 JAKMIP1Q96N16 626 aaKnown RBP16.7■□□□□ 0.26
CTSA-219ENST00000607841 PAGR1Q9BTK6 254 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 RBPJLQ9UBG7 517 aa16.7■□□□□ 0.26
CTSA-219ENST00000607841 GNRH1P01148 92 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 FDX1P10109 184 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 FCGRTP55899 365 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 ERVK-9P63128 1117 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 ERVK-24P63145 666 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 ADCK5Q3MIX3 580 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 C8orf34Q49A92 452 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 GPATCH4Q5T3I0 446 aaKnown RBP16.69■□□□□ 0.26
CTSA-219ENST00000607841 BLOC1S2Q6QNY1 142 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 CATIPQ7Z7H3 387 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 CCAR1Q8IX12 1150 aaKnown RBP16.69■□□□□ 0.26
CTSA-219ENST00000607841 CD99L2Q8TCZ2 262 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 KIFC2Q96AC6 838 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 FBXO28Q9NVF7 368 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 ADAMTS5Q9UNA0 930 aa16.69■□□□□ 0.26
CTSA-219ENST00000607841 CTDP1Q9Y5B0 961 aaPredicted RBP16.69■□□□□ 0.26
CTSA-219ENST00000607841 ZBED4O75132 1171 aa16.68■□□□□ 0.26
CTSA-219ENST00000607841 FMNL1O95466 1100 aaPredicted RBP16.68■□□□□ 0.26
CTSA-219ENST00000607841 SNHG28P0DPA3 235 aa16.68■□□□□ 0.26
CTSA-219ENST00000607841 LIFRP42702 1097 aa16.68■□□□□ 0.26
CTSA-219ENST00000607841 NFXL1Q6ZNB6 911 aa16.68■□□□□ 0.26
CTSA-219ENST00000607841 KCTD1Q719H9 257 aa16.68■□□□□ 0.26
CTSA-219ENST00000607841 CHMP4CQ96CF2 233 aa16.68■□□□□ 0.26
CTSA-219ENST00000607841 ATG4CQ96DT6 458 aa16.68■□□□□ 0.26
CTSA-219ENST00000607841 EFCC1Q9HA90 598 aa16.68■□□□□ 0.26
CTSA-219ENST00000607841 TXNRD2Q9NNW7 524 aa16.68■□□□□ 0.26
CTSA-219ENST00000607841 CCDC69A6NI79 296 aa16.67■□□□□ 0.26
CTSA-219ENST00000607841 VWA5AO00534 786 aa16.67■□□□□ 0.26
CTSA-219ENST00000607841 SH2B2O14492 632 aaPredicted RBP16.67■□□□□ 0.26
CTSA-219ENST00000607841 PARP1P09874 1014 aaKnown RBP16.67■□□□□ 0.26
CTSA-219ENST00000607841 HOXD10P28358 340 aa16.67■□□□□ 0.26
CTSA-219ENST00000607841 PSMC4P43686 418 aa16.67■□□□□ 0.26
CTSA-219ENST00000607841 ANAPC15P60006 121 aa16.67■□□□□ 0.26
CTSA-219ENST00000607841 FGD1P98174 961 aa16.67■□□□□ 0.26
CTSA-219ENST00000607841 EXOSC10Q01780 885 aaKnown RBP16.67■□□□□ 0.26
CTSA-219ENST00000607841 ZNF543Q08ER8 600 aa16.67■□□□□ 0.26
CTSA-219ENST00000607841 ASPRV1Q53RT3 343 aa16.67■□□□□ 0.26
CTSA-219ENST00000607841 CTU1Q7Z7A3 348 aaKnown RBP16.67■□□□□ 0.26
CTSA-219ENST00000607841 LY9Q9HBG7 655 aa16.67■□□□□ 0.26
CTSA-219ENST00000607841 FRMPD2Q68DX3 1309 aaPredicted RBP16.67■□□□□ 0.26
CTSA-219ENST00000607841 TNPO2O14787 897 aaKnown RBP16.66■□□□□ 0.26
CTSA-219ENST00000607841 CNMDO75829 334 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 SEC24BO95487 1268 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 CASTP20810 708 aaKnown RBP16.66■□□□□ 0.26
CTSA-219ENST00000607841 MAPK4P31152 587 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 PKN2Q16513 984 aaKnown RBP16.66■□□□□ 0.26
CTSA-219ENST00000607841 Q3C1V9 767 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 POTEEQ6S8J3 1075 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 BTNL9Q6UXG8 535 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 SYNE3Q6ZMZ3 975 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 TM6SF1Q9BZW5 370 aa16.66■□□□□ 0.26
CTSA-219ENST00000607841 CWC22Q9HCG8 908 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms