RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	SHCBP1	Q8NEM2	672 aa		12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	MKL1	Q969V6	931 aa		12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	EVI5L	Q96CN4	794 aa		12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	HTATIP2	Q9BUP3	242 aa		12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	UNC93B1	Q9H1C4	597 aa		12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	OSBPL3	Q9H4L5	887 aa		12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	ARHGEF10L	Q9HCE6	1279 aa		12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	BTBD7	Q9P203	1132 aa		12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	NYAP2	Q9P242	653 aa		12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	RPTOR	Q8N122	1335 aa		12.83	□□□□□ -0.36
TPM2-208	ENST00000607559	IGKV6D-41	A0A0C4DH26	115 aa		12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	SLC15A5	A6NIM6	579 aa		12.82	□□□□□ -0.36
TPM2-208	ENST00000607559		M0R2C6	588 aa		12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	MPHOSPH10	O00566	681 aa	Known RBP	12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	WDR46	O15213	610 aa	Known RBP	12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	STRN	O43815	780 aa		12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	PEX10	O60683	326 aa		12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	PTPRE	P23469	700 aa		12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	ALX1	Q15699	326 aa		12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	ZYX	Q15942	572 aa	Known RBP	12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	IFNL3	Q8IZI9	196 aa		12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	RWDD1	Q9H446	243 aa	Predicted RBP	12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	OCEL1	Q9H607	264 aa		12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	ZNF287	Q9HBT7	754 aa		12.82	□□□□□ -0.36
TPM2-208	ENST00000607559	NAV1	Q8NEY1	1877 aa		12.81	□□□□□ -0.36
TPM2-208	ENST00000607559	FOXP2	O15409	715 aa		12.81	□□□□□ -0.36
TPM2-208	ENST00000607559	FGR	P09769	529 aa		12.81	□□□□□ -0.36
TPM2-208	ENST00000607559	EEF2	P13639	858 aa	Known RBP	12.81	□□□□□ -0.36
TPM2-208	ENST00000607559	ABRA	Q8N0Z2	381 aa		12.81	□□□□□ -0.36
TPM2-208	ENST00000607559	ANKLE1	Q8NAG6	615 aa		12.81	□□□□□ -0.36
TPM2-208	ENST00000607559	TRIB2	Q92519	343 aa		12.81	□□□□□ -0.36
TPM2-208	ENST00000607559	DPF3	Q92784	378 aa		12.81	□□□□□ -0.36
TPM2-208	ENST00000607559	SEC62	Q99442	399 aa	Known RBP	12.81	□□□□□ -0.36
TPM2-208	ENST00000607559		H0YGN5	161 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	RGS2	P41220	211 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	MAP2K5	Q13163	448 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	GRB14	Q14449	540 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	DEFB118	Q96PH6	123 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	PAGR1	Q9BTK6	254 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	NACAP1	Q9BZK3	213 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	HMX1	Q9NP08	348 aa	Predicted RBP	12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	HELLS	Q9NRZ9	838 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	ANAPC4	Q9UJX5	808 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	OGDHL	Q9ULD0	1010 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	NR2E3	Q9Y5X4	410 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	MYH7	P12883	1935 aa		12.8	□□□□□ -0.36
TPM2-208	ENST00000607559	FARP2	O94887	1054 aa	Predicted RBP	12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	IGHD	P01880	384 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	NOV	P48745	357 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	NUCB1	Q02818	461 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	NEDD1	Q8NHV4	660 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	APBA2	Q99767	749 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	FSD1	Q9BTV5	496 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	MOV10L1	Q9BXT6	1211 aa	Known RBP	12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	SPATC1L	Q9H0A9	340 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	MROH8	Q9H579	483 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	MKNK2	Q9HBH9	465 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	MTMR4	Q9NYA4	1195 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	PLIN4	Q96Q06	1357 aa		12.79	□□□□□ -0.36
TPM2-208	ENST00000607559	PLXNB2	O15031	1838 aa		12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	RLF	Q13129	1914 aa		12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	MINDY4B	A8MYZ0	360 aa		12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	ATP2A1	O14983	1001 aa		12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	TFRC	P02786	760 aa	Known RBP	12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	CYP2B6	P20813	491 aa		12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	FXR1	P51114	621 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	CACNB2	Q08289	660 aa	Predicted RBP	12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	CHD1L	Q86WJ1	897 aa		12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	CLEC10A	Q8IUN9	316 aa		12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	CCAR1	Q8IX12	1150 aa	Known RBP	12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	YTHDC1	Q96MU7	727 aa	Known RBP	12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	GOPC	Q9HD26	462 aa		12.78	□□□□□ -0.36
TPM2-208	ENST00000607559	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
TPM2-208	ENST00000607559		F5H6K3	240 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	FLOT1	O75955	427 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	SLC25A27	O95847	323 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	APP	P05067	770 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	TDO2	P48775	406 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	PDE4B	Q07343	736 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	KLRC3	Q07444	240 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	TRIM32	Q13049	653 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	OLFML2B	Q68BL8	750 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	RIOX2	Q8IUF8	465 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	PLEKHM2	Q8IWE5	1019 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	ZNF444	Q8N0Y2	327 aa	Predicted RBP	12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	REPS2	Q8NFH8	660 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	EXOC6	Q8TAG9	804 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	ATG4C	Q96DT6	458 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	TANGO6	Q9C0B7	1094 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	PPP1R9A	Q9ULJ8	1098 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	IVNS1ABP	Q9Y6Y0	642 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	GREB1L	Q9C091	1923 aa	Predicted RBP	12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	ZMYM6	O95789	1325 aa		12.77	□□□□□ -0.37
TPM2-208	ENST00000607559	BAZ2A	Q9UIF9	1905 aa	Known RBP	12.76	□□□□□ -0.37
TPM2-208	ENST00000607559	VWA5A	O00534	786 aa		12.76	□□□□□ -0.37
TPM2-208	ENST00000607559	TTLL1	O95922	423 aa		12.76	□□□□□ -0.37
TPM2-208	ENST00000607559	SLC3A2	P08195	630 aa	Known RBP	12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms