RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 USP17L18D6R9N7 530 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 USP17L22D6RA61 530 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 USP17L17D6RBQ6 530 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 USP17L19D6RCP7 530 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 USP17L20D6RJB6 530 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 PRDM1O75626 825 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 APPP05067 770 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 NCLP19338 710 aaKnown RBP12.36□□□□□ -0.43
LINC01001-203ENST00000607448 RASA1P20936 1047 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 TDO2P48775 406 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 ERVK-9P63128 1117 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 ERVK-24P63145 666 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 USP17L24Q0WX57 530 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 CAVIN1Q6NZI2 390 aaKnown RBP12.36□□□□□ -0.43
LINC01001-203ENST00000607448 GIMAP6Q6P9H5 292 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 SPICE1Q8N0Z3 855 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 SYAP1Q96A49 352 aaPredicted RBP12.36□□□□□ -0.43
LINC01001-203ENST00000607448 EVI5LQ96CN4 794 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 FAM227BQ96M60 508 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 TM6SF1Q9BZW5 370 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 SNX14Q9Y5W7 946 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 ZNFX1Q9P2E3 1918 aaKnown RBP12.36□□□□□ -0.43
LINC01001-203ENST00000607448 LAMA4Q16363 1823 aa12.36□□□□□ -0.43
LINC01001-203ENST00000607448 A0A0D9SFI3 127 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 ESPNB1AK53 854 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 ADCY3O60266 1144 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 EEF2P13639 858 aaKnown RBP12.35□□□□□ -0.43
LINC01001-203ENST00000607448 GNAT2P19087 354 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 KCNB2Q92953 911 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 BTBD7Q9P203 1132 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 GJD2Q9UKL4 321 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 TAOK2Q9UL54 1235 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 TMX2Q9Y320 296 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.35□□□□□ -0.43
LINC01001-203ENST00000607448 TACC3Q9Y6A5 838 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 PDIA4P13667 645 aaKnown RBP12.35□□□□□ -0.43
LINC01001-203ENST00000607448 HS1BP3Q53T59 392 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 GPRC5AQ8NFJ5 357 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 GPT2Q8TD30 523 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 COA7Q96BR5 231 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 SHISA4Q96DD7 197 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 ZSCAN31Q96LW9 406 aaPredicted RBP12.35□□□□□ -0.43
LINC01001-203ENST00000607448 CCDC17Q96LX7 622 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 TTC14Q96N46 770 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
LINC01001-203ENST00000607448 INHAP05111 366 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 CCL5P13501 91 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 ATP2B2Q01814 1243 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 TRIM32Q13049 653 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 IRF5Q13568 498 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 LRRFIP1Q32MZ4 808 aaKnown RBP12.34□□□□□ -0.43
LINC01001-203ENST00000607448 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 GPR142Q7Z601 462 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 ZNF589Q86UQ0 364 aaPredicted RBP12.34□□□□□ -0.43
LINC01001-203ENST00000607448 SLAIN1Q8ND83 568 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 TMEM106CQ9BVX2 250 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 UPF3BQ9BZI7 483 aaKnown RBP12.34□□□□□ -0.43
LINC01001-203ENST00000607448 UNC93B1Q9H1C4 597 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 VCPKMTQ9H867 229 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 ARHGEF10LQ9HCE6 1279 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 INCENPQ9NQS7 918 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 PLXNA1Q9UIW2 1896 aa12.34□□□□□ -0.43
LINC01001-203ENST00000607448 ALPK3Q96L96 1907 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 ZNF236Q9UL36 1845 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 CTDSPL2Q05D32 466 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 PPARAQ07869 468 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 NMIQ13287 307 aaPredicted RBP12.33□□□□□ -0.44
LINC01001-203ENST00000607448 CWC27Q6UX04 472 aaKnown RBP12.33□□□□□ -0.44
LINC01001-203ENST00000607448 LBX2Q6XYB7 198 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 TMEM87AQ8NBN3 555 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 PXYLP1Q8TE99 480 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 TANGO6Q9C0B7 1094 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 NAPBQ9H115 298 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 IL25Q9H293 177 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 MKNK2Q9HBH9 465 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 SH2B1Q9NRF2 756 aaPredicted RBP12.33□□□□□ -0.44
LINC01001-203ENST00000607448 BIN2Q9UBW5 565 aaPredicted RBP12.33□□□□□ -0.44
LINC01001-203ENST00000607448 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
LINC01001-203ENST00000607448 IGKV6D-41A0A0C4DH26 115 aa12.32□□□□□ -0.44
LINC01001-203ENST00000607448 CYP2B6P20813 491 aa12.32□□□□□ -0.44
LINC01001-203ENST00000607448 FAM47AQ5JRC9 791 aa12.32□□□□□ -0.44
LINC01001-203ENST00000607448 TRIB2Q92519 343 aa12.32□□□□□ -0.44
LINC01001-203ENST00000607448 RNF208Q9H0X6 261 aa12.32□□□□□ -0.44
LINC01001-203ENST00000607448 KANSL2Q9H9L4 492 aa12.32□□□□□ -0.44
LINC01001-203ENST00000607448 HELLSQ9NRZ9 838 aa12.32□□□□□ -0.44
LINC01001-203ENST00000607448 FBXO28Q9NVF7 368 aa12.32□□□□□ -0.44
LINC01001-203ENST00000607448 ATP6V1DQ9Y5K8 247 aa12.32□□□□□ -0.44
LINC01001-203ENST00000607448 FLOT1O75955 427 aa12.31□□□□□ -0.44
LINC01001-203ENST00000607448 COG2Q14746 738 aa12.31□□□□□ -0.44
LINC01001-203ENST00000607448 CCL14Q16627 93 aa12.31□□□□□ -0.44
LINC01001-203ENST00000607448 CSPP1Q1MSJ5 1256 aa12.31□□□□□ -0.44
LINC01001-203ENST00000607448 SAMD1Q6SPF0 538 aaPredicted RBP12.31□□□□□ -0.44
LINC01001-203ENST00000607448 GTF3C2Q8WUA4 911 aaPredicted RBP12.31□□□□□ -0.44
LINC01001-203ENST00000607448 USP6NLQ92738 828 aa12.31□□□□□ -0.44
LINC01001-203ENST00000607448 ATG4CQ96DT6 458 aa12.31□□□□□ -0.44
LINC01001-203ENST00000607448 CEP95Q96GE4 821 aa12.31□□□□□ -0.44
LINC01001-203ENST00000607448 NUP88Q99567 741 aaPredicted RBP12.31□□□□□ -0.44
LINC01001-203ENST00000607448 NACAP1Q9BZK3 213 aa12.31□□□□□ -0.44
LINC01001-203ENST00000607448 CCDC171Q6TFL3 1326 aa12.31□□□□□ -0.44
LINC01001-203ENST00000607448 RAD21O60216 631 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms