RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 KCTD1Q719H9 257 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 TMTC2Q8N394 836 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 PROCA1Q8NCQ7 364 aaPredicted RBP8.98□□□□□ -0.97
MSH6-211ENST00000606499 NUP133Q8WUM0 1156 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 BRI3BPQ8WY22 251 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 CCDC102AQ96A19 550 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 GMCL1Q96IK5 515 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 C12orf42Q96LP6 360 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 ZIC5Q96T25 663 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 RPAP3Q9H6T3 665 aaPredicted RBP8.98□□□□□ -0.97
MSH6-211ENST00000606499 NCOA5Q9HCD5 579 aaKnown RBP8.98□□□□□ -0.97
MSH6-211ENST00000606499 TMOD4Q9NZQ9 345 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 ISY1Q9ULR0 285 aaKnown RBP8.98□□□□□ -0.97
MSH6-211ENST00000606499 HPS5Q9UPZ3 1129 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 SLC12A7Q9Y666 1083 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 NID2Q14112 1375 aa8.98□□□□□ -0.97
MSH6-211ENST00000606499 RBBP6Q7Z6E9 1792 aaKnown RBP8.97□□□□□ -0.97
MSH6-211ENST00000606499 GOLGA8AA7E2F4 631 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 WDR46O15213 610 aaKnown RBP8.97□□□□□ -0.97
MSH6-211ENST00000606499 DTNBO60941 627 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 DDAH1O94760 285 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 CETPP11597 493 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 BMP3P12645 472 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 PDIA3P30101 505 aaKnown RBP8.97□□□□□ -0.97
MSH6-211ENST00000606499 SLC1A4P43007 532 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 VEGFBP49765 207 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 METAP2P50579 478 aaKnown RBP eCLIP8.97□□□□□ -0.97
MSH6-211ENST00000606499 ZNF543Q08ER8 600 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 GRM4Q14833 912 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 GPAT2Q6NUI2 795 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 SYNE3Q6ZMZ3 975 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 STAG2Q8N3U4 1231 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 DCAF4Q8WV16 495 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 LPAR1Q92633 364 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 TANGO6Q9C0B7 1094 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 CPVLQ9H3G5 476 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 GPCPD1Q9NPB8 672 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 TSHZ2Q9NRE2 1034 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 FBXO28Q9NVF7 368 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 MAD2L2Q9UI95 211 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 AGTPBP1Q9UPW5 1226 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 MYH6P13533 1939 aa8.97□□□□□ -0.97
MSH6-211ENST00000606499 MANSC4A6NHS7 340 aaPredicted RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 BTBD19C9JJ37 291 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 IGF2BP3O00425 579 aaKnown RBP eCLIP8.96□□□□□ -0.98
MSH6-211ENST00000606499 PLEKHA8P1O95397 391 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 PARP1P09874 1014 aaKnown RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 CALM1P0DP23 149 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 CALM2P0DP24 149 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 CALM3P0DP25 149 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 CDC27P30260 824 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 SLC16A2P36021 539 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 CCT2P78371 535 aaKnown RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 KIF23Q02241 960 aaPredicted RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 ST3GAL1Q11201 340 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 IKQ13123 557 aaPredicted RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 NOGQ13253 232 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 ME3Q16798 604 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 RTN1Q16799 776 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 ASPRV1Q53RT3 343 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 TTBK2Q6IQ55 1244 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 SAMD1Q6SPF0 538 aaPredicted RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 FASTKD5Q7L8L6 764 aaKnown RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 CMTR1Q8N1G2 835 aaKnown RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 NECAB1Q8N987 351 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 FANCBQ8NB91 859 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 CTCFLQ8NI51 663 aaPredicted RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 ZNF274Q96GC6 653 aaPredicted RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 PTPN18Q99952 460 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 LIMCH1Q9UPQ0 1083 aa8.96□□□□□ -0.98
MSH6-211ENST00000606499 WDR33Q9C0J8 1336 aaKnown RBP8.96□□□□□ -0.98
MSH6-211ENST00000606499 TESPA1A2RU30 521 aaPredicted RBP8.95□□□□□ -0.98
MSH6-211ENST00000606499 PALM3A6NDB9 673 aaPredicted RBP8.95□□□□□ -0.98
MSH6-211ENST00000606499 USP17L15C9J2P7 530 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 USP17L13C9JLJ4 530 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 TMEM232C9JQI7 657 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 USP17L11C9JVI0 530 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 KLRF2D3W0D1 207 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 USP17L18D6R9N7 530 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 USP17L22D6RA61 530 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 USP17L17D6RBQ6 530 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 USP17L19D6RCP7 530 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 USP17L20D6RJB6 530 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 PDHXO00330 501 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 PFKFB2O60825 505 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 PPFIA3O75145 1194 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 KIF5BP33176 963 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 ADD1P35611 737 aaKnown RBP8.95□□□□□ -0.98
MSH6-211ENST00000606499 STAT2P52630 851 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 RCAN1P53805 252 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 USP17L24Q0WX57 530 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 SCRN1Q12765 414 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 SLC35G1Q2M3R5 365 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 GPATCH4Q5T3I0 446 aaKnown RBP8.95□□□□□ -0.98
MSH6-211ENST00000606499 TMTC3Q6ZXV5 915 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 ANKRD23Q86SG2 305 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 NBPF11Q86T75 865 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 FAM43AQ8N2R8 423 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 GTF3C6Q969F1 213 aa8.95□□□□□ -0.98
MSH6-211ENST00000606499 TMX3Q96JJ7 454 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms