RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 ZNF174Q15697 407 aa22.65■■□□□ 1.22
MMP28-201ENST00000605424 CCDC144BQ3MJ40 725 aa22.65■■□□□ 1.22
MMP28-201ENST00000605424 SMC2O95347 1197 aa22.64■■□□□ 1.21
MMP28-201ENST00000605424 SLFN14P0C7P3 912 aa22.64■■□□□ 1.21
MMP28-201ENST00000605424 CACTINQ8WUQ7 758 aaKnown RBP22.64■■□□□ 1.21
MMP28-201ENST00000605424 OSBPL5Q9H0X9 879 aaPredicted RBP22.64■■□□□ 1.21
MMP28-201ENST00000605424 BARHL2Q9NY43 387 aa22.64■■□□□ 1.21
MMP28-201ENST00000605424 MMP10P09238 476 aa22.63■■□□□ 1.21
MMP28-201ENST00000605424 ISM2Q6H9L7 571 aa22.63■■□□□ 1.21
MMP28-201ENST00000605424 HHIPL2Q6UWX4 724 aa22.63■■□□□ 1.21
MMP28-201ENST00000605424 MYO3BQ8WXR4 1341 aa22.63■■□□□ 1.21
MMP28-201ENST00000605424 MAN1B1Q9UKM7 699 aa22.63■■□□□ 1.21
MMP28-201ENST00000605424 M0R2N6 131 aa22.63■■□□□ 1.21
MMP28-201ENST00000605424 CBFA2T2O43439 604 aa22.63■■□□□ 1.21
MMP28-201ENST00000605424 PARP1P09874 1014 aaKnown RBP22.63■■□□□ 1.21
MMP28-201ENST00000605424 MORC3Q14149 939 aa22.63■■□□□ 1.21
MMP28-201ENST00000605424 CCDC12Q8WUD4 166 aaPredicted RBP22.63■■□□□ 1.21
MMP28-201ENST00000605424 PRIMPOLQ96LW4 560 aa22.63■■□□□ 1.21
MMP28-201ENST00000605424 KLRF2D3W0D1 207 aa22.62■■□□□ 1.21
MMP28-201ENST00000605424 CYTH3O43739 400 aa22.62■■□□□ 1.21
MMP28-201ENST00000605424 VEGFAP15692 232 aaPredicted RBP22.62■■□□□ 1.21
MMP28-201ENST00000605424 GABPAQ06546 454 aa22.62■■□□□ 1.21
MMP28-201ENST00000605424 USP49Q70CQ1 688 aa22.62■■□□□ 1.21
MMP28-201ENST00000605424 SH3RF1Q7Z6J0 888 aa22.62■■□□□ 1.21
MMP28-201ENST00000605424 SYMPKQ92797 1274 aaKnown RBP22.62■■□□□ 1.21
MMP28-201ENST00000605424 SWAP70Q9UH65 585 aa22.62■■□□□ 1.21
MMP28-201ENST00000605424 TTF2Q9UNY4 1162 aaKnown RBP22.62■■□□□ 1.21
MMP28-201ENST00000605424 FOXN1O15353 648 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 LRMPQ12912 555 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 NOM1Q5C9Z4 860 aaKnown RBP22.61■■□□□ 1.21
MMP28-201ENST00000605424 PODNQ7Z5L7 613 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 PDILTQ8N807 584 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 XPO4Q9C0E2 1151 aaKnown RBP22.61■■□□□ 1.21
MMP28-201ENST00000605424 IFNKQ9P0W0 207 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 WNT7AO00755 349 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 FANCCQ00597 558 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 WWC2Q6AWC2 1192 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 C17orf53Q8N3J3 647 aaPredicted RBP22.61■■□□□ 1.21
MMP28-201ENST00000605424 CERS5Q8N5B7 392 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 CEP95Q96GE4 821 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 EPSTI1Q96J88 318 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 MRIQ9BWK5 157 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 HSD3B7Q9H2F3 369 aa22.61■■□□□ 1.21
MMP28-201ENST00000605424 BAZ2BQ9UIF8 2168 aaKnown RBP22.6■■□□□ 1.21
MMP28-201ENST00000605424 C10orf71Q711Q0 1435 aa22.6■■□□□ 1.21
MMP28-201ENST00000605424 G3V3G9 751 aa22.6■■□□□ 1.21
MMP28-201ENST00000605424 STXBP3O00186 592 aa22.6■■□□□ 1.21
MMP28-201ENST00000605424 BMP6P22004 513 aa22.6■■□□□ 1.21
MMP28-201ENST00000605424 LONP1P36776 959 aaKnown RBP22.6■■□□□ 1.21
MMP28-201ENST00000605424 FKBP1AP62942 108 aaKnown RBP22.6■■□□□ 1.21
MMP28-201ENST00000605424 DCAF8Q5TAQ9 597 aa22.6■■□□□ 1.21
MMP28-201ENST00000605424 GPKOWQ92917 476 aaPredicted RBP eCLIP22.6■■□□□ 1.21
MMP28-201ENST00000605424 COL11A2P13942 1736 aaPredicted RBP22.6■■□□□ 1.21
MMP28-201ENST00000605424 CCDC194A0A1B0GVG4 234 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 LMOD1P29536 600 aaPredicted RBP22.59■■□□□ 1.21
MMP28-201ENST00000605424 SLC35G1Q2M3R5 365 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 STYK1Q6J9G0 422 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 ENOX1Q8TC92 643 aaKnown RBP22.59■■□□□ 1.21
MMP28-201ENST00000605424 DHX58Q96C10 678 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 VWA3AA6NCI4 1184 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 hCG_1984214I3L0E3 225 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 PRR29P0C7W0 189 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 ERCC5P28715 1186 aaPredicted RBP22.59■■□□□ 1.21
MMP28-201ENST00000605424 HEATR3Q7Z4Q2 680 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 FILIP1Q7Z7B0 1213 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 ZNF713Q8N859 430 aaPredicted RBP22.59■■□□□ 1.21
MMP28-201ENST00000605424 IQUBQ8NA54 791 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 CCDC150Q8NCX0 1101 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 TEKT1Q969V4 418 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 RRP36Q96EU6 259 aaKnown RBP22.59■■□□□ 1.21
MMP28-201ENST00000605424 GSDMAQ96QA5 445 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 ZMYND12Q9H0C1 365 aa22.59■■□□□ 1.21
MMP28-201ENST00000605424 LAD1O00515 517 aa22.58■■□□□ 1.21
MMP28-201ENST00000605424 MCM7P33993 719 aa22.58■■□□□ 1.21
MMP28-201ENST00000605424 R3HDM1Q15032 1099 aaKnown RBP22.58■■□□□ 1.21
MMP28-201ENST00000605424 MSL1Q68DK7 614 aa22.58■■□□□ 1.21
MMP28-201ENST00000605424 C4orf32Q8N8J7 132 aa22.58■■□□□ 1.21
MMP28-201ENST00000605424 PAGE5Q96GU1 130 aa22.58■■□□□ 1.21
MMP28-201ENST00000605424 USP40Q9NVE5 1235 aa22.58■■□□□ 1.21
MMP28-201ENST00000605424 MTMR4Q9NYA4 1195 aa22.58■■□□□ 1.21
MMP28-201ENST00000605424 PCDHA6Q9UN73 950 aa22.58■■□□□ 1.21
MMP28-201ENST00000605424 PCDHA8Q9Y5H6 950 aa22.58■■□□□ 1.21
MMP28-201ENST00000605424 A0A087X0B3 334 aa22.57■■□□□ 1.2
MMP28-201ENST00000605424 GNA11P29992 359 aa22.57■■□□□ 1.2
MMP28-201ENST00000605424 DOK7Q18PE1 504 aa22.57■■□□□ 1.2
MMP28-201ENST00000605424 TYW1BQ6NUM6 668 aa22.57■■□□□ 1.2
MMP28-201ENST00000605424 PSDA5PKW4 1024 aaPredicted RBP22.57■■□□□ 1.2
MMP28-201ENST00000605424 PPP4R3BQ5MIZ7 849 aa22.57■■□□□ 1.2
MMP28-201ENST00000605424 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.57■■□□□ 1.2
MMP28-201ENST00000605424 SEC63Q9UGP8 760 aaKnown RBP22.57■■□□□ 1.2
MMP28-201ENST00000605424 SERPINB13Q9UIV8 391 aa22.57■■□□□ 1.2
MMP28-201ENST00000605424 IGKV6D-41A0A0C4DH26 115 aa22.56■■□□□ 1.2
MMP28-201ENST00000605424 TXLNAP40222 546 aa22.56■■□□□ 1.2
MMP28-201ENST00000605424 UBASH3AP57075 661 aa22.56■■□□□ 1.2
MMP28-201ENST00000605424 PICALMQ13492 652 aa22.56■■□□□ 1.2
MMP28-201ENST00000605424 ASPRV1Q53RT3 343 aa22.56■■□□□ 1.2
MMP28-201ENST00000605424 C6orf50Q9HD87 102 aa22.56■■□□□ 1.2
MMP28-201ENST00000605424 KCND1Q9NSA2 647 aa22.56■■□□□ 1.2
MMP28-201ENST00000605424 F8W031 263 aaPredicted RBP22.55■■□□□ 1.2
MMP28-201ENST00000605424 H0YIN7 160 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms