RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 SLITRK4Q8IW52 837 aa4.72□□□□□ -1.65
SGMS1-207ENST00000602619 ZNF654Q8IZM8 581 aa4.72□□□□□ -1.65
SGMS1-207ENST00000602619 GOLM1Q8NBJ4 401 aa4.72□□□□□ -1.65
SGMS1-207ENST00000602619 ZNF296Q8WUU4 475 aaPredicted RBP4.72□□□□□ -1.65
SGMS1-207ENST00000602619 BORCS6Q96GS4 357 aa4.72□□□□□ -1.65
SGMS1-207ENST00000602619 INTS4Q96HW7 963 aaKnown RBP4.72□□□□□ -1.65
SGMS1-207ENST00000602619 WNT10AQ9GZT5 417 aa4.72□□□□□ -1.65
SGMS1-207ENST00000602619 ADAM30Q9UKF2 790 aa4.72□□□□□ -1.65
SGMS1-207ENST00000602619 YBX2Q9Y2T7 364 aaKnown RBP4.72□□□□□ -1.65
SGMS1-207ENST00000602619 PCDHGB7Q9Y5F8 929 aa4.72□□□□□ -1.65
SGMS1-207ENST00000602619 PRAMEF27A3QJZ7 478 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 F6X3S4 739 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 RFXAPO00287 272 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 ATE1O95260 518 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 ZGLP1P0C6A0 271 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 LMNB1P20700 586 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 KIR3DL1P43629 444 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 FAM160A1Q05DH4 1040 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 TMEM201Q5SNT2 666 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 SNAP47Q5SQN1 464 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 ZNF746Q6NUN9 644 aaPredicted RBP4.71□□□□□ -1.66
SGMS1-207ENST00000602619 CDH24Q86UP0 819 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 KIAA0825Q8IV33 1275 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 MRPL41Q8IXM3 137 aaKnown RBP4.71□□□□□ -1.66
SGMS1-207ENST00000602619 ZDHHC14Q8IZN3 488 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 LILRA2Q8N149 483 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 REXO1Q8N1G1 1221 aaKnown RBP4.71□□□□□ -1.66
SGMS1-207ENST00000602619 DACT3Q96B18 629 aaPredicted RBP4.71□□□□□ -1.66
SGMS1-207ENST00000602619 ELMO3Q96BJ8 720 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 EAF1Q96JC9 268 aaPredicted RBP4.71□□□□□ -1.66
SGMS1-207ENST00000602619 SPON2Q9BUD6 331 aa4.71□□□□□ -1.66
SGMS1-207ENST00000602619 DUSP15Q9H1R2 295 aaPredicted RBP4.71□□□□□ -1.66
SGMS1-207ENST00000602619 CWC22Q9HCG8 908 aaKnown RBP4.71□□□□□ -1.66
SGMS1-207ENST00000602619 MINDY4BA8MYZ0 360 aa4.7□□□□□ -1.66
SGMS1-207ENST00000602619 PI3P19957 117 aa4.7□□□□□ -1.66
SGMS1-207ENST00000602619 TPP2P29144 1249 aaPredicted RBP4.7□□□□□ -1.66
SGMS1-207ENST00000602619 GAB4Q2WGN9 574 aa4.7□□□□□ -1.66
SGMS1-207ENST00000602619 DIEXFQ68CQ4 756 aaKnown RBP4.7□□□□□ -1.66
SGMS1-207ENST00000602619 OXR1Q8N573 874 aa4.7□□□□□ -1.66
SGMS1-207ENST00000602619 XAGE3Q8WTP9 111 aa4.7□□□□□ -1.66
SGMS1-207ENST00000602619 SPATA32Q96LK8 384 aa4.7□□□□□ -1.66
SGMS1-207ENST00000602619 EHMT1Q9H9B1 1298 aa4.7□□□□□ -1.66
SGMS1-207ENST00000602619 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.7□□□□□ -1.66
SGMS1-207ENST00000602619 POLR3KQ9Y2Y1 108 aaPredicted RBP4.7□□□□□ -1.66
SGMS1-207ENST00000602619 FITM1A5D6W6 292 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 BPNT1O95861 308 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 INSRRP14616 1297 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 CYP7A1P22680 504 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 PDE6BP35913 854 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 COL9A2Q14055 689 aaPredicted RBP4.69□□□□□ -1.66
SGMS1-207ENST00000602619 NR0B2Q15466 257 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 VMACQ2NL98 169 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 CWF19L2Q2TBE0 894 aaKnown RBP4.69□□□□□ -1.66
SGMS1-207ENST00000602619 PRAMEF13Q5VWM6 474 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 FBXO27Q8NI29 283 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 PIWIL2Q8TC59 973 aaKnown RBP4.69□□□□□ -1.66
SGMS1-207ENST00000602619 SHISA4Q96DD7 197 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 COX4I2Q96KJ9 171 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 Q96M66 194 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 UBP1Q9NZI7 540 aa4.69□□□□□ -1.66
SGMS1-207ENST00000602619 MEIS3P2A8K0S8 358 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 CST3P01034 146 aaPredicted RBP4.68□□□□□ -1.66
SGMS1-207ENST00000602619 GRK4P32298 578 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 SOX9P48436 509 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 GALK1P51570 392 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 AFF3P51826 1226 aaKnown RBP4.68□□□□□ -1.66
SGMS1-207ENST00000602619 PDE4BQ07343 736 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 EFEMP1Q12805 493 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 PAK2Q13177 524 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 ERICH6BQ5W0A0 696 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 HID1Q8IV36 788 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 MCATQ8IVS2 390 aaKnown RBP4.68□□□□□ -1.66
SGMS1-207ENST00000602619 SLFN12Q8IYM2 578 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 SYT8Q8NBV8 401 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 JARID2Q92833 1246 aaPredicted RBP4.68□□□□□ -1.66
SGMS1-207ENST00000602619 SIGLEC10Q96LC7 697 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 TINF2Q9BSI4 451 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 ADAM7Q9H2U9 754 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 EPB41L4AQ9HCS5 686 aaPredicted RBP4.68□□□□□ -1.66
SGMS1-207ENST00000602619 EBF1Q9UH73 591 aa4.68□□□□□ -1.66
SGMS1-207ENST00000602619 MBD1Q9UIS9 605 aaPredicted RBP4.68□□□□□ -1.66
SGMS1-207ENST00000602619 SLC22A31A6NKX4 558 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 HTR3BO95264 441 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 ERCC5P28715 1186 aaPredicted RBP4.67□□□□□ -1.66
SGMS1-207ENST00000602619 EGR3Q06889 387 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 KRTAP1-1Q07627 177 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 APOBRQ0VD83 1088 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 SPATS1Q496A3 300 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 C9orf131Q5VYM1 1079 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 SLC6A19Q695T7 634 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 ACSF2Q96CM8 615 aaPredicted RBP4.67□□□□□ -1.66
SGMS1-207ENST00000602619 GPRASP2Q96D09 838 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 TJP2Q9UDY2 1190 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 ZNRF3Q9ULT6 936 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 IRAK3Q9Y616 596 aa4.67□□□□□ -1.66
SGMS1-207ENST00000602619 PGRP06401 933 aa4.66□□□□□ -1.66
SGMS1-207ENST00000602619 ETF1P62495 437 aaKnown RBP4.66□□□□□ -1.66
SGMS1-207ENST00000602619 SRSF3P84103 164 aaKnown RBP4.66□□□□□ -1.66
SGMS1-207ENST00000602619 PUM1Q14671 1186 aaKnown RBP eCLIP4.66□□□□□ -1.66
SGMS1-207ENST00000602619 SNX17Q15036 470 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms