RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 PDPK1O15530 556 aa11.07□□□□□ -0.64
SGMS1-206ENST00000602565 FOSL1P15407 271 aa11.07□□□□□ -0.64
SGMS1-206ENST00000602565 CLEC16AQ2KHT3 1053 aa11.07□□□□□ -0.64
SGMS1-206ENST00000602565 NOL9Q5SY16 702 aaKnown RBP11.07□□□□□ -0.64
SGMS1-206ENST00000602565 CDKAL1Q5VV42 579 aa11.07□□□□□ -0.64
SGMS1-206ENST00000602565 MRM1Q6IN84 353 aaKnown RBP11.07□□□□□ -0.64
SGMS1-206ENST00000602565 PRR19A6NJB7 356 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 SUSD5O60279 629 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 TGFB1P01137 390 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 ITGA4P13612 1032 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 GRIK1P39086 918 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 ZNF143P52747 638 aaPredicted RBP11.06□□□□□ -0.64
SGMS1-206ENST00000602565 RASA3Q14644 834 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 ANKRD39Q53RE8 183 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 LRP10Q7Z4F1 713 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 NETO1Q8TDF5 533 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 PPP1R14AQ96A00 147 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 APBA2Q99767 749 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 PRDM14Q9GZV8 571 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 SUGT1Q9Y2Z0 365 aa11.06□□□□□ -0.64
SGMS1-206ENST00000602565 CBFA2T2O43439 604 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 PPM1BO75688 479 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 CD247P20963 164 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 RASGRF1Q13972 1273 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 IFI16Q16666 785 aaKnown RBP11.05□□□□□ -0.64
SGMS1-206ENST00000602565 MTERF2Q49AM1 385 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 SDE2Q6IQ49 451 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 PLD6Q8N2A8 252 aaKnown RBP11.05□□□□□ -0.64
SGMS1-206ENST00000602565 FGD4Q96M96 766 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 KLHL25Q9H0H3 589 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 TRIT1Q9H3H1 467 aaKnown RBP11.05□□□□□ -0.64
SGMS1-206ENST00000602565 GP6Q9HCN6 339 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 WHRNQ9P202 907 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 ZNF451Q9Y4E5 1061 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 U3KQE9 123 aa11.05□□□□□ -0.64
SGMS1-206ENST00000602565 AGRPO00253 132 aa11.04□□□□□ -0.64
SGMS1-206ENST00000602565 NMIQ13287 307 aaPredicted RBP11.04□□□□□ -0.64
SGMS1-206ENST00000602565 SNW1Q13573 536 aaKnown RBP11.04□□□□□ -0.64
SGMS1-206ENST00000602565 SV2CQ496J9 727 aa11.04□□□□□ -0.64
SGMS1-206ENST00000602565 ST13P5Q8NFI4 369 aaPredicted RBP11.04□□□□□ -0.64
SGMS1-206ENST00000602565 DSCC1Q9BVC3 393 aa11.04□□□□□ -0.64
SGMS1-206ENST00000602565 EPN3Q9H201 632 aa11.04□□□□□ -0.64
SGMS1-206ENST00000602565 PIF1Q9H611 641 aa11.04□□□□□ -0.64
SGMS1-206ENST00000602565 GPATCH2Q9NW75 528 aa11.04□□□□□ -0.64
SGMS1-206ENST00000602565 GFOD1Q9NXC2 390 aa11.04□□□□□ -0.64
SGMS1-206ENST00000602565 ZC3H7BQ9UGR2 993 aaKnown RBP11.04□□□□□ -0.64
SGMS1-206ENST00000602565 SHOXO15266 292 aa11.03□□□□□ -0.64
SGMS1-206ENST00000602565 CLCN7P51798 805 aa11.03□□□□□ -0.64
SGMS1-206ENST00000602565 NKPD1Q17RQ9 610 aa11.03□□□□□ -0.64
SGMS1-206ENST00000602565 TMC3Q7Z5M5 1100 aa11.03□□□□□ -0.64
SGMS1-206ENST00000602565 SPACA3Q8IXA5 215 aa11.03□□□□□ -0.64
SGMS1-206ENST00000602565 LRP2BPQ9P2M1 347 aa11.03□□□□□ -0.64
SGMS1-206ENST00000602565 TBX22Q9Y458 520 aa11.03□□□□□ -0.64
SGMS1-206ENST00000602565 TMEM265A0A087WTH1 108 aa11.02□□□□□ -0.65
SGMS1-206ENST00000602565 FAM221BA6H8Z2 402 aa11.02□□□□□ -0.65
SGMS1-206ENST00000602565 H3BS24 57 aa11.02□□□□□ -0.65
SGMS1-206ENST00000602565 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.65
SGMS1-206ENST00000602565 ADCY4Q8NFM4 1077 aa11.02□□□□□ -0.65
SGMS1-206ENST00000602565 GPR62Q9BZJ7 368 aa11.02□□□□□ -0.65
SGMS1-206ENST00000602565 PRR13Q9NZ81 148 aa11.02□□□□□ -0.65
SGMS1-206ENST00000602565 SIGLEC6O43699 453 aa11.01□□□□□ -0.65
SGMS1-206ENST00000602565 ZNF662Q6ZS27 426 aa11.01□□□□□ -0.65
SGMS1-206ENST00000602565 BRF1Q92994 677 aa11.01□□□□□ -0.65
SGMS1-206ENST00000602565 HSPA12BQ96MM6 686 aa11.01□□□□□ -0.65
SGMS1-206ENST00000602565 CHST7Q9NS84 486 aa11.01□□□□□ -0.65
SGMS1-206ENST00000602565 PLAGL2Q9UPG8 496 aa11.01□□□□□ -0.65
SGMS1-206ENST00000602565 ST14Q9Y5Y6 855 aa11.01□□□□□ -0.65
SGMS1-206ENST00000602565 IQCA1LA6NCM1 817 aa11□□□□□ -0.65
SGMS1-206ENST00000602565 MEIS1O00470 390 aa11□□□□□ -0.65
SGMS1-206ENST00000602565 PRAMEF1O95521 474 aa11□□□□□ -0.65
SGMS1-206ENST00000602565 HOXA10P31260 410 aaPredicted RBP11□□□□□ -0.65
SGMS1-206ENST00000602565 SLC10A6Q3KNW5 377 aa11□□□□□ -0.65
SGMS1-206ENST00000602565 INTS5Q6P9B9 1019 aaKnown RBP11□□□□□ -0.65
SGMS1-206ENST00000602565 ENOX1Q8TC92 643 aaKnown RBP11□□□□□ -0.65
SGMS1-206ENST00000602565 NOL6Q9H6R4 1146 aaKnown RBP11□□□□□ -0.65
SGMS1-206ENST00000602565 SUSD2Q9UGT4 822 aa11□□□□□ -0.65
SGMS1-206ENST00000602565 SHISA3A0PJX4 238 aa10.99□□□□□ -0.65
SGMS1-206ENST00000602565 NOP56O00567 594 aaKnown RBP10.99□□□□□ -0.65
SGMS1-206ENST00000602565 CLSTN1O94985 981 aa10.99□□□□□ -0.65
SGMS1-206ENST00000602565 ZNF445P59923 1031 aa10.99□□□□□ -0.65
SGMS1-206ENST00000602565 THAP5Q7Z6K1 395 aa10.99□□□□□ -0.65
SGMS1-206ENST00000602565 CRACR2BQ8N4Y2 399 aaPredicted RBP10.99□□□□□ -0.65
SGMS1-206ENST00000602565 HRASLS5Q96KN8 279 aa10.99□□□□□ -0.65
SGMS1-206ENST00000602565 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
SGMS1-206ENST00000602565 ZSWIM5Q9P217 1185 aa10.99□□□□□ -0.65
SGMS1-206ENST00000602565 PFDN2Q9UHV9 154 aa10.99□□□□□ -0.65
SGMS1-206ENST00000602565 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.99□□□□□ -0.65
SGMS1-206ENST00000602565 SNX11Q9Y5W9 270 aa10.99□□□□□ -0.65
SGMS1-206ENST00000602565 FHOD1Q9Y613 1164 aa10.99□□□□□ -0.65
SGMS1-206ENST00000602565 COBLO75128 1261 aa10.98□□□□□ -0.65
SGMS1-206ENST00000602565 EGFLAMQ63HQ2 1017 aa10.98□□□□□ -0.65
SGMS1-206ENST00000602565 FIBCD1Q8N539 461 aa10.98□□□□□ -0.65
SGMS1-206ENST00000602565 LRRN4CLQ8ND94 238 aa10.98□□□□□ -0.65
SGMS1-206ENST00000602565 SYTL5Q8TDW5 730 aaPredicted RBP10.98□□□□□ -0.65
SGMS1-206ENST00000602565 UBE2FQ969M7 185 aa10.98□□□□□ -0.65
SGMS1-206ENST00000602565 DNAJC7Q99615 494 aa10.98□□□□□ -0.65
SGMS1-206ENST00000602565 APEX2Q9UBZ4 518 aa10.98□□□□□ -0.65
SGMS1-206ENST00000602565 RNF112Q9ULX5 631 aa10.98□□□□□ -0.65
SGMS1-206ENST00000602565 SF3B6Q9Y3B4 125 aaKnown RBP10.98□□□□□ -0.65
SGMS1-206ENST00000602565 SBNO2Q9Y2G9 1366 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms