RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 KIF23Q02241 960 aaPredicted RBP16.62■□□□□ 0.25
ZNF548-212ENST00000602086 SAFBQ15424 915 aaKnown RBP eCLIP16.62■□□□□ 0.25
ZNF548-212ENST00000602086 EAPPQ56P03 285 aaPredicted RBP16.62■□□□□ 0.25
ZNF548-212ENST00000602086 MCTP1Q6DN14 999 aa16.62■□□□□ 0.25
ZNF548-212ENST00000602086 CDAN1Q8IWY9 1227 aa16.62■□□□□ 0.25
ZNF548-212ENST00000602086 CMTR1Q8N1G2 835 aaKnown RBP16.62■□□□□ 0.25
ZNF548-212ENST00000602086 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
ZNF548-212ENST00000602086 ZNF341Q9BYN7 854 aa16.62■□□□□ 0.25
ZNF548-212ENST00000602086 FOXP1Q9H334 677 aaPredicted RBP16.62■□□□□ 0.25
ZNF548-212ENST00000602086 SH2D4AQ9H788 454 aa16.62■□□□□ 0.25
ZNF548-212ENST00000602086 GGA3Q9NZ52 723 aa16.62■□□□□ 0.25
ZNF548-212ENST00000602086 PPFIA3O75145 1194 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 JAG1P78504 1218 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 SUPT20HL1Q3ZLR7 823 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 USP17L2Q6R6M4 530 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 FERMT3Q86UX7 667 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 LRRC47Q8N1G4 583 aaKnown RBP16.61■□□□□ 0.25
ZNF548-212ENST00000602086 CCDC82Q8N4S0 544 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 ZNF396Q96N95 335 aaPredicted RBP16.61■□□□□ 0.25
ZNF548-212ENST00000602086 AIFM3Q96NN9 605 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 SCAND2PQ9GZW5 306 aaPredicted RBP16.61■□□□□ 0.25
ZNF548-212ENST00000602086 LMBRD1Q9NUN5 540 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 CFAP45Q9UL16 551 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 TMX2Q9Y320 296 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 ELP1O95163 1332 aa16.61■□□□□ 0.25
ZNF548-212ENST00000602086 IQCA1LA6NCM1 817 aa16.6■□□□□ 0.25
ZNF548-212ENST00000602086 FOXN1O15353 648 aa16.6■□□□□ 0.25
ZNF548-212ENST00000602086 CYTH3O43739 400 aa16.6■□□□□ 0.25
ZNF548-212ENST00000602086 DNM1Q05193 864 aaKnown RBP16.6■□□□□ 0.25
ZNF548-212ENST00000602086 SLFN13Q68D06 897 aa16.6■□□□□ 0.25
ZNF548-212ENST00000602086 GALNT17Q6IS24 598 aa16.6■□□□□ 0.25
ZNF548-212ENST00000602086 MIGA2Q7L4E1 593 aa16.6■□□□□ 0.25
ZNF548-212ENST00000602086 CLEC10AQ8IUN9 316 aa16.6■□□□□ 0.25
ZNF548-212ENST00000602086 PHF20Q9BVI0 1012 aa16.6■□□□□ 0.25
ZNF548-212ENST00000602086 TAF1DQ9H5J8 278 aaPredicted RBP16.6■□□□□ 0.25
ZNF548-212ENST00000602086 POLR2AP24928 1970 aaKnown RBP16.6■□□□□ 0.25
ZNF548-212ENST00000602086 DOCK1Q14185 1865 aa16.59■□□□□ 0.25
ZNF548-212ENST00000602086 F5H6K3 240 aa16.59■□□□□ 0.25
ZNF548-212ENST00000602086 CALML3P27482 149 aa16.59■□□□□ 0.25
ZNF548-212ENST00000602086 GUCY1B3Q02153 619 aa16.59■□□□□ 0.25
ZNF548-212ENST00000602086 KLRC3Q07444 240 aa16.59■□□□□ 0.25
ZNF548-212ENST00000602086 SLC35G1Q2M3R5 365 aa16.59■□□□□ 0.25
ZNF548-212ENST00000602086 NBPF12Q5TAG4 269 aaPredicted RBP16.59■□□□□ 0.25
ZNF548-212ENST00000602086 OTUD7BQ6GQQ9 843 aa16.59■□□□□ 0.25
ZNF548-212ENST00000602086 DCPSQ96C86 337 aaKnown RBP16.59■□□□□ 0.25
ZNF548-212ENST00000602086 MTMR8Q96EF0 704 aa16.59■□□□□ 0.25
ZNF548-212ENST00000602086 RRP36Q96EU6 259 aaKnown RBP16.59■□□□□ 0.25
ZNF548-212ENST00000602086 PLA2G6O60733 806 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 ATP2B2Q01814 1243 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 NBR1Q14596 966 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 SHROOM1Q2M3G4 852 aaPredicted RBP16.58■□□□□ 0.24
ZNF548-212ENST00000602086 BTNL9Q6UXG8 535 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 LDHDQ86WU2 507 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 CCDC148Q8NFR7 591 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 CCDC12Q8WUD4 166 aaPredicted RBP16.58■□□□□ 0.24
ZNF548-212ENST00000602086 ANP32EQ9BTT0 268 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 BRMS1Q9HCU9 246 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 GOPCQ9HD26 462 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 BARHL2Q9NY43 387 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 PASKQ96RG2 1323 aa16.58■□□□□ 0.24
ZNF548-212ENST00000602086 BAZ2BQ9UIF8 2168 aaKnown RBP16.58■□□□□ 0.24
ZNF548-212ENST00000602086 A0A1W2PRG0 241 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 UBE2Q2LH0YL09 131 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 NDUFB10O96000 172 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 GOLGA8HP0CJ92 632 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 EPHX2P34913 555 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 SLC1A4P43007 532 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 NOL9Q5SY16 702 aaKnown RBP16.57■□□□□ 0.24
ZNF548-212ENST00000602086 MYSM1Q5VVJ2 828 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 USP48Q86UV5 1035 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 PNMA8AQ86V59 439 aaPredicted RBP16.57■□□□□ 0.24
ZNF548-212ENST00000602086 DIS3L2Q8IYB7 885 aaKnown RBP16.57■□□□□ 0.24
ZNF548-212ENST00000602086 DAGLBQ8NCG7 672 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 VCPKMTQ9H867 229 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 GJB4Q9NTQ9 266 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 SEC63Q9UGP8 760 aaKnown RBP16.57■□□□□ 0.24
ZNF548-212ENST00000602086 CNPY2Q9Y2B0 182 aa16.57■□□□□ 0.24
ZNF548-212ENST00000602086 ESYT2A0FGR8 921 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 KIF28PB7ZC32 967 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 TRAK2O60296 914 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 PRPF40AO75400 957 aaKnown RBP16.56■□□□□ 0.24
ZNF548-212ENST00000602086 MBD3O95983 291 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 BMP3P12645 472 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 KRT2P35908 639 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 FOSBP53539 338 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 KLHL40Q2TBA0 621 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 PPP1R18Q6NYC8 613 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 NOSTRINQ8IVI9 506 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 TEX2Q8IWB9 1127 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 SULF1Q8IWU6 871 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 SCYL3Q8IZE3 742 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 WDR18Q9BV38 432 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 POLR3EQ9NVU0 708 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 RTEL1Q9NZ71 1219 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 VPS54Q9P1Q0 977 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 RCOR1Q9UKL0 485 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 MTMR7Q9Y216 660 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 CLEC11AQ9Y240 323 aa16.56■□□□□ 0.24
ZNF548-212ENST00000602086 MORC2Q9Y6X9 1032 aaPredicted RBP16.56■□□□□ 0.24
ZNF548-212ENST00000602086 TRPM7Q96QT4 1865 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms