RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 ZNF865P0CJ78 1059 aaPredicted RBP19.49■□□□□ 0.71
SSBP4-211ENST00000601614 SPICE1Q8N0Z3 855 aa19.49■□□□□ 0.71
SSBP4-211ENST00000601614 PPM1EQ8WY54 764 aa19.49■□□□□ 0.71
SSBP4-211ENST00000601614 TIFAQ96CG3 184 aa19.49■□□□□ 0.71
SSBP4-211ENST00000601614 MCM3APO60318 1980 aa19.48■□□□□ 0.71
SSBP4-211ENST00000601614 TCF20Q9UGU0 1960 aaKnown RBP19.48■□□□□ 0.71
SSBP4-211ENST00000601614 CYP2D6P10635 497 aa19.48■□□□□ 0.71
SSBP4-211ENST00000601614 FCER1AP12319 257 aa19.48■□□□□ 0.71
SSBP4-211ENST00000601614 SAMD1Q6SPF0 538 aaPredicted RBP19.48■□□□□ 0.71
SSBP4-211ENST00000601614 C16orf59Q7L2K0 433 aa19.48■□□□□ 0.71
SSBP4-211ENST00000601614 ANKRD33Q7Z3H0 272 aa19.48■□□□□ 0.71
SSBP4-211ENST00000601614 RNF180Q86T96 592 aa19.48■□□□□ 0.71
SSBP4-211ENST00000601614 TINF2Q9BSI4 451 aa19.48■□□□□ 0.71
SSBP4-211ENST00000601614 C1orf115Q9H7X2 142 aa19.48■□□□□ 0.71
SSBP4-211ENST00000601614 NRBP1Q9UHY1 535 aa19.48■□□□□ 0.71
SSBP4-211ENST00000601614 ATP8B2P98198 1209 aa19.47■□□□□ 0.71
SSBP4-211ENST00000601614 ZNF792Q3KQV3 632 aa19.47■□□□□ 0.71
SSBP4-211ENST00000601614 PBX4Q9BYU1 374 aa19.47■□□□□ 0.71
SSBP4-211ENST00000601614 SMIM22K7EJ46 135 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 IRX5P78411 483 aaPredicted RBP19.46■□□□□ 0.71
SSBP4-211ENST00000601614 MAP3K12Q12852 859 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 TMEM57Q8N5G2 664 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 DYNLL2Q96FJ2 89 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 TOX2Q96NM4 488 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 MMP19Q99542 508 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 PRDM12Q9H4Q4 367 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 FBXO28Q9NVF7 368 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 MCM9Q9NXL9 1143 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 TBX21Q9UL17 535 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 NOP58Q9Y2X3 529 aaKnown RBP19.46■□□□□ 0.71
SSBP4-211ENST00000601614 TMX2Q9Y320 296 aa19.46■□□□□ 0.71
SSBP4-211ENST00000601614 CHD9Q3L8U1 2897 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 MYADML2A6NDP7 307 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 ZNF316A6NFI3 1004 aaPredicted RBP19.45■□□□□ 0.7
SSBP4-211ENST00000601614 TIMP1P01033 207 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 ACLYP53396 1101 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 ADGRE1Q14246 886 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 TMEM240Q5SV17 173 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 RASIP1Q5U651 963 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 TMEM179Q6ZVK1 233 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 SDR42E1Q8WUS8 393 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 FRAT1Q92837 279 aaPredicted RBP19.45■□□□□ 0.7
SSBP4-211ENST00000601614 VCPKMTQ9H867 229 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 STARD7Q9NQZ5 370 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 ADAMTS5Q9UNA0 930 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 SYNRGQ9UMZ2 1314 aa19.45■□□□□ 0.7
SSBP4-211ENST00000601614 MAGEB6P1A0A0J9YX57 407 aa19.44■□□□□ 0.7
SSBP4-211ENST00000601614 SLC25A27O95847 323 aa19.44■□□□□ 0.7
SSBP4-211ENST00000601614 AKR1A1P14550 325 aa19.44■□□□□ 0.7
SSBP4-211ENST00000601614 AKR1B1P15121 316 aa19.44■□□□□ 0.7
SSBP4-211ENST00000601614 CCSAPQ6IQ19 270 aaPredicted RBP19.44■□□□□ 0.7
SSBP4-211ENST00000601614 KLHDC9Q8NEP7 349 aa19.44■□□□□ 0.7
SSBP4-211ENST00000601614 ADAMTS19Q8TE59 1207 aa19.44■□□□□ 0.7
SSBP4-211ENST00000601614 ATXN2LQ8WWM7 1075 aaKnown RBP19.44■□□□□ 0.7
SSBP4-211ENST00000601614 ASB2Q96Q27 587 aa19.44■□□□□ 0.7
SSBP4-211ENST00000601614 DCP1AQ9NPI6 582 aaPredicted RBP19.44■□□□□ 0.7
SSBP4-211ENST00000601614 THEGQ9P2T0 379 aa19.44■□□□□ 0.7
SSBP4-211ENST00000601614 DCDC2CA8MYV0 355 aa19.43■□□□□ 0.7
SSBP4-211ENST00000601614 ICA1Q05084 483 aa19.43■□□□□ 0.7
SSBP4-211ENST00000601614 AKNAD1Q5T1N1 836 aa19.43■□□□□ 0.7
SSBP4-211ENST00000601614 MFSD5Q6N075 450 aa19.43■□□□□ 0.7
SSBP4-211ENST00000601614 RIOX2Q8IUF8 465 aa19.43■□□□□ 0.7
SSBP4-211ENST00000601614 GAS2L1Q99501 681 aaPredicted RBP19.43■□□□□ 0.7
SSBP4-211ENST00000601614 TSEN34Q9BSV6 310 aaKnown RBP19.43■□□□□ 0.7
SSBP4-211ENST00000601614 DIS3Q9Y2L1 958 aaKnown RBP19.43■□□□□ 0.7
SSBP4-211ENST00000601614 BDP1A6H8Y1 2624 aa19.43■□□□□ 0.7
SSBP4-211ENST00000601614 WDR46O15213 610 aaKnown RBP19.42■□□□□ 0.7
SSBP4-211ENST00000601614 IPO8O15397 1037 aaKnown RBP19.42■□□□□ 0.7
SSBP4-211ENST00000601614 KCNA10Q16322 511 aa19.42■□□□□ 0.7
SSBP4-211ENST00000601614 LCORLQ8N3X6 602 aa19.42■□□□□ 0.7
SSBP4-211ENST00000601614 REPS2Q8NFH8 660 aa19.42■□□□□ 0.7
SSBP4-211ENST00000601614 CRNKL1Q9BZJ0 848 aaKnown RBP19.42■□□□□ 0.7
SSBP4-211ENST00000601614 ZNF214Q9UL59 606 aaPredicted RBP19.42■□□□□ 0.7
SSBP4-211ENST00000601614 ADCY6O43306 1168 aa19.41■□□□□ 0.7
SSBP4-211ENST00000601614 SNAI1O95863 264 aaPredicted RBP19.41■□□□□ 0.7
SSBP4-211ENST00000601614 ACRP10323 421 aa19.41■□□□□ 0.7
SSBP4-211ENST00000601614 CSF2RAP15509 400 aa19.41■□□□□ 0.7
SSBP4-211ENST00000601614 PDE6AP16499 860 aa19.41■□□□□ 0.7
SSBP4-211ENST00000601614 CDK7P50613 346 aa19.41■□□□□ 0.7
SSBP4-211ENST00000601614 CCDC85BQ15834 202 aaPredicted RBP19.41■□□□□ 0.7
SSBP4-211ENST00000601614 CCDC129Q6ZRS4 1044 aa19.41■□□□□ 0.7
SSBP4-211ENST00000601614 ARHGEF10LQ9HCE6 1279 aa19.41■□□□□ 0.7
SSBP4-211ENST00000601614 TCRBV5S4A2TA0A5A2 114 aa19.4■□□□□ 0.7
SSBP4-211ENST00000601614 VWA5AO00534 786 aa19.4■□□□□ 0.7
SSBP4-211ENST00000601614 PLA2G5P39877 138 aa19.4■□□□□ 0.7
SSBP4-211ENST00000601614 STAT3P40763 770 aa19.4■□□□□ 0.7
SSBP4-211ENST00000601614 PPIGQ13427 754 aaKnown RBP eCLIP19.4■□□□□ 0.73e-8■■■■□ 20.9
SSBP4-211ENST00000601614 KCTD2Q14681 263 aa19.4■□□□□ 0.7
SSBP4-211ENST00000601614 SLC9C2Q5TAH2 1124 aa19.4■□□□□ 0.7
SSBP4-211ENST00000601614 TMED8Q6PL24 325 aaPredicted RBP19.4■□□□□ 0.7
SSBP4-211ENST00000601614 ZNF365Q70YC5 407 aa19.4■□□□□ 0.7
SSBP4-211ENST00000601614 NUP133Q8WUM0 1156 aa19.4■□□□□ 0.7
SSBP4-211ENST00000601614 UHRF1Q96T88 793 aaPredicted RBP19.4■□□□□ 0.7
SSBP4-211ENST00000601614 GREB1LQ9C091 1923 aaPredicted RBP19.4■□□□□ 0.7
SSBP4-211ENST00000601614 ZNF532Q9HCE3 1301 aa19.4■□□□□ 0.7
SSBP4-211ENST00000601614 CHD7Q9P2D1 2997 aa19.39■□□□□ 0.7
SSBP4-211ENST00000601614 REV3LO60673 3130 aa19.39■□□□□ 0.69
SSBP4-211ENST00000601614 CYP2D7A0A087X1C5 515 aa19.39■□□□□ 0.69
SSBP4-211ENST00000601614 MOXD2PA6NHM9 499 aa19.39■□□□□ 0.69
SSBP4-211ENST00000601614 SLFNL1Q499Z3 407 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms