RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PRKG1Q13976 671 aa26.14■■□□□ 1.78
IRF3-228ENST00000601291 NOL9Q5SY16 702 aaKnown RBP26.14■■□□□ 1.78
IRF3-228ENST00000601291 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.14■■□□□ 1.784e-6■■■■□ 20.6
IRF3-228ENST00000601291 ACER1Q8TDN7 264 aa26.14■■□□□ 1.78
IRF3-228ENST00000601291 ZKSCAN4Q969J2 545 aaPredicted RBP26.14■■□□□ 1.78
IRF3-228ENST00000601291 FEZ1Q99689 392 aa26.14■■□□□ 1.78
IRF3-228ENST00000601291 AS3MTQ9HBK9 375 aa26.14■■□□□ 1.78
IRF3-228ENST00000601291 GPCPD1Q9NPB8 672 aa26.14■■□□□ 1.78
IRF3-228ENST00000601291 ATP6V1DQ9Y5K8 247 aa26.14■■□□□ 1.78
IRF3-228ENST00000601291 USP2O75604 605 aaPredicted RBP26.13■■□□□ 1.77
IRF3-228ENST00000601291 IREB2P48200 963 aaKnown RBP26.13■■□□□ 1.77
IRF3-228ENST00000601291 DLK2Q6UY11 383 aa26.13■■□□□ 1.77
IRF3-228ENST00000601291 FBXO18Q8NFZ0 1043 aa26.13■■□□□ 1.77
IRF3-228ENST00000601291 AIFM3Q96NN9 605 aa26.13■■□□□ 1.77
IRF3-228ENST00000601291 FZD1Q9UP38 647 aa26.13■■□□□ 1.77
IRF3-228ENST00000601291 LDHDQ86WU2 507 aa26.12■■□□□ 1.77
IRF3-228ENST00000601291 GBP4Q96PP9 640 aa26.12■■□□□ 1.77
IRF3-228ENST00000601291 VCPKMTQ9H867 229 aa26.12■■□□□ 1.77
IRF3-228ENST00000601291 UBE2Q2LH0YL09 131 aa26.12■■□□□ 1.77
IRF3-228ENST00000601291 POTEIP0CG38 1075 aa26.12■■□□□ 1.77
IRF3-228ENST00000601291 POTEJP0CG39 1038 aa26.12■■□□□ 1.77
IRF3-228ENST00000601291 KCTD1Q719H9 257 aa26.12■■□□□ 1.77
IRF3-228ENST00000601291 CCDC84Q86UT8 332 aaPredicted RBP26.12■■□□□ 1.77
IRF3-228ENST00000601291 RRP36Q96EU6 259 aaKnown RBP26.12■■□□□ 1.77
IRF3-228ENST00000601291 BMP3P12645 472 aa26.11■■□□□ 1.77
IRF3-228ENST00000601291 SCG2P13521 617 aa26.11■■□□□ 1.77
IRF3-228ENST00000601291 MAP3K9P80192 1104 aa26.11■■□□□ 1.77
IRF3-228ENST00000601291 GUCY1B3Q02153 619 aa26.11■■□□□ 1.77
IRF3-228ENST00000601291 PKN1Q16512 942 aa26.11■■□□□ 1.77
IRF3-228ENST00000601291 PFKFB3Q16875 520 aaPredicted RBP26.11■■□□□ 1.77
IRF3-228ENST00000601291 SEC63Q9UGP8 760 aaKnown RBP26.11■■□□□ 1.77
IRF3-228ENST00000601291 CSADQ9Y600 493 aa26.11■■□□□ 1.77
IRF3-228ENST00000601291 hCG_1642624A0A1W2PR95 340 aa26.1■■□□□ 1.77
IRF3-228ENST00000601291 CYTH3O43739 400 aa26.1■■□□□ 1.77
IRF3-228ENST00000601291 PTPRAP18433 802 aa26.1■■□□□ 1.77
IRF3-228ENST00000601291 MAP1SQ66K74 1059 aaPredicted RBP26.1■■□□□ 1.77
IRF3-228ENST00000601291 KRT40Q6A162 431 aa26.1■■□□□ 1.77
IRF3-228ENST00000601291 UBA5Q9GZZ9 404 aa26.1■■□□□ 1.77
IRF3-228ENST00000601291 RIOX1Q9H6W3 641 aa26.1■■□□□ 1.77
IRF3-228ENST00000601291 TTLL12Q14166 644 aaPredicted RBP26.09■■□□□ 1.77
IRF3-228ENST00000601291 ZYXQ15942 572 aaKnown RBP26.09■■□□□ 1.77
IRF3-228ENST00000601291 ZNF526Q8TF50 670 aaPredicted RBP26.09■■□□□ 1.77
IRF3-228ENST00000601291 PIBF1Q8WXW3 757 aa26.09■■□□□ 1.77
IRF3-228ENST00000601291 WDR18Q9BV38 432 aa26.09■■□□□ 1.77
IRF3-228ENST00000601291 KIAA1683Q9H0B3 1180 aa26.09■■□□□ 1.77
IRF3-228ENST00000601291 CPVLQ9H3G5 476 aa26.09■■□□□ 1.77
IRF3-228ENST00000601291 ZSCAN16Q9H4T2 348 aaPredicted RBP26.09■■□□□ 1.77
IRF3-228ENST00000601291 NMRK2Q9NPI5 230 aa26.09■■□□□ 1.77
IRF3-228ENST00000601291 MYH6P13533 1939 aa26.09■■□□□ 1.77
IRF3-228ENST00000601291 USP14P54578 494 aa26.08■■□□□ 1.77
IRF3-228ENST00000601291 SLC35G1Q2M3R5 365 aa26.08■■□□□ 1.77
IRF3-228ENST00000601291 MCTP1Q6DN14 999 aa26.08■■□□□ 1.77
IRF3-228ENST00000601291 OTUD7BQ6GQQ9 843 aa26.08■■□□□ 1.77
IRF3-228ENST00000601291 FERMT3Q86UX7 667 aa26.08■■□□□ 1.77
IRF3-228ENST00000601291 SPICE1Q8N0Z3 855 aa26.08■■□□□ 1.77
IRF3-228ENST00000601291 USP17L10C9JJH3 530 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 VGLL4Q14135 290 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 TTBK2Q6IQ55 1244 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 CLEC17AQ6ZS10 378 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 ARMC9Q7Z3E5 817 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 ZNF280CQ8ND82 737 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 LPAR1Q92633 364 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 VAT1LQ9HCJ6 419 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 IKQ13123 557 aaPredicted RBP26.07■■□□□ 1.76
IRF3-228ENST00000601291 SAFBQ15424 915 aaKnown RBP eCLIP26.07■■□□□ 1.76
IRF3-228ENST00000601291 MAP3K11Q16584 847 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.07■■□□□ 1.76
IRF3-228ENST00000601291 HOMER1Q86YM7 354 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 NUP88Q99567 741 aaPredicted RBP26.07■■□□□ 1.76
IRF3-228ENST00000601291 GJB4Q9NTQ9 266 aa26.07■■□□□ 1.76
IRF3-228ENST00000601291 PAPPA2Q9BXP8 1791 aa26.06■■□□□ 1.76
IRF3-228ENST00000601291 ANKRD13AQ8IZ07 590 aa26.06■■□□□ 1.76
IRF3-228ENST00000601291 ADGRF4Q8IZF3 695 aa26.06■■□□□ 1.76
IRF3-228ENST00000601291 PIGSQ96S52 555 aa26.06■■□□□ 1.76
IRF3-228ENST00000601291 VPS54Q9P1Q0 977 aa26.06■■□□□ 1.76
IRF3-228ENST00000601291 SNCAIPQ9Y6H5 919 aa26.06■■□□□ 1.76
IRF3-228ENST00000601291 ZHX2Q9Y6X8 837 aa26.06■■□□□ 1.76
IRF3-228ENST00000601291 TMEM232C9JQI7 657 aa26.05■■□□□ 1.76
IRF3-228ENST00000601291 hCG_1984214I3L0E3 225 aa26.05■■□□□ 1.76
IRF3-228ENST00000601291 BAG4O95429 457 aaKnown RBP26.05■■□□□ 1.76
IRF3-228ENST00000601291 MMP1P03956 469 aa26.05■■□□□ 1.76
IRF3-228ENST00000601291 SLC16A2P36021 539 aa26.05■■□□□ 1.76
IRF3-228ENST00000601291 SPP2Q13103 211 aa26.05■■□□□ 1.76
IRF3-228ENST00000601291 RESTQ13127 1097 aa26.05■■□□□ 1.76
IRF3-228ENST00000601291 MTMR2Q13614 643 aa26.05■■□□□ 1.76
IRF3-228ENST00000601291 GNL2Q13823 731 aaKnown RBP26.05■■□□□ 1.76
IRF3-228ENST00000601291 FAM83BQ5T0W9 1011 aa26.05■■□□□ 1.76
IRF3-228ENST00000601291 ZNF713Q8N859 430 aaPredicted RBP26.05■■□□□ 1.76
IRF3-228ENST00000601291 SH3GLB2Q9NR46 395 aa26.05■■□□□ 1.76
IRF3-228ENST00000601291 STAT2P52630 851 aa26.04■■□□□ 1.76
IRF3-228ENST00000601291 KIAA1755Q5JYT7 1200 aa26.04■■□□□ 1.76
IRF3-228ENST00000601291 HEATR3Q7Z4Q2 680 aa26.04■■□□□ 1.76
IRF3-228ENST00000601291 FAM177A1Q8N128 213 aaPredicted RBP26.04■■□□□ 1.76
IRF3-228ENST00000601291 JMJD4Q9H9V9 463 aa26.04■■□□□ 1.76
IRF3-228ENST00000601291 OTOFQ9HC10 1997 aa26.04■■□□□ 1.76
IRF3-228ENST00000601291 WDR46O15213 610 aaKnown RBP26.03■■□□□ 1.76
IRF3-228ENST00000601291 BACE1P56817 501 aa26.03■■□□□ 1.76
IRF3-228ENST00000601291 BTNL9Q6UXG8 535 aa26.03■■□□□ 1.76
IRF3-228ENST00000601291 CCDC148Q8NFR7 591 aa26.03■■□□□ 1.76
IRF3-228ENST00000601291 CCDC12Q8WUD4 166 aaPredicted RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms