RNA–Protein interactions for RNA: ENST00000601154.1

CCDC9-206, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 454 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-206ENST00000601154 PDLIM7Q9NR12 457 aa10.03□□□□□ -0.8
CCDC9-206ENST00000601154 SLC4A4Q9Y6R1 1079 aa10.03□□□□□ -0.8
CCDC9-206ENST00000601154 A0A0G2JMZ2 1700 aa10.02□□□□□ -0.8
CCDC9-206ENST00000601154 POTEB2H3BUK9 544 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 PGK1P00558 417 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 RARBP10826 455 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 TAL1P17542 331 aaPredicted RBP10.02□□□□□ -0.81
CCDC9-206ENST00000601154 KCTD2Q14681 263 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 FAM83BQ5T0W9 1011 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 C12orf60Q5U649 245 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.02□□□□□ -0.81
CCDC9-206ENST00000601154 RPAP2Q8IXW5 612 aaPredicted RBP10.02□□□□□ -0.81
CCDC9-206ENST00000601154 ABRAQ8N0Z2 381 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 DDRGK1Q96HY6 314 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 CCDC17Q96LX7 622 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 NUP88Q99567 741 aaPredicted RBP10.02□□□□□ -0.81
CCDC9-206ENST00000601154 XPNPEP3Q9NQH7 507 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 ATP8A2Q9NTI2 1148 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 ZNF236Q9UL36 1845 aa10.02□□□□□ -0.81
CCDC9-206ENST00000601154 TRIM43BA6NCK2 446 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 SMARCA5O60264 1052 aaPredicted RBP10.01□□□□□ -0.81
CCDC9-206ENST00000601154 RAB11FIP3O75154 756 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 SLC25A27O95847 323 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 ATP5JP18859 108 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 SLC4A3P48751 1232 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 TLE2Q04725 743 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 SNX17Q15036 470 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 C16orf86Q6ZW13 317 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 TRIM43Q96BQ3 446 aaPredicted RBP10.01□□□□□ -0.81
CCDC9-206ENST00000601154 HAUS7Q99871 368 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 COL25A1Q9BXS0 654 aaPredicted RBP10.01□□□□□ -0.81
CCDC9-206ENST00000601154 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 DDX19BQ9UMR2 479 aa10.01□□□□□ -0.81
CCDC9-206ENST00000601154 VWA5AO00534 786 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 PQBP1O60828 265 aaKnown RBP10□□□□□ -0.81
CCDC9-206ENST00000601154 MS4A1P11836 297 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 STAT3P40763 770 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 FAM109BQ6ICB4 259 aaPredicted RBP10□□□□□ -0.81
CCDC9-206ENST00000601154 CTR9Q6PD62 1173 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 RIOX2Q8IUF8 465 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 CDX2Q99626 313 aaPredicted RBP10□□□□□ -0.81
CCDC9-206ENST00000601154 TINF2Q9BSI4 451 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 PUS7LQ9H0K6 701 aaKnown RBP10□□□□□ -0.81
CCDC9-206ENST00000601154 KANSL2Q9H9L4 492 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 ZBTB40Q9NUA8 1239 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 PPP1R9AQ9ULJ8 1098 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 ZBED9Q6R2W3 1325 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 LTBP2Q14767 1821 aa10□□□□□ -0.81
CCDC9-206ENST00000601154 CUL9Q8IWT3 2517 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 A0A1W2PQ45 241 aaPredicted RBP9.99□□□□□ -0.81
CCDC9-206ENST00000601154 A0A1W2PQY0 241 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 CLTBP09497 229 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 ITGB8P26012 769 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 EPHB4P54760 987 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 UBE3CQ15386 1083 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 ZNF792Q3KQV3 632 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 SNRNP48Q6IEG0 339 aaKnown RBP9.99□□□□□ -0.81
CCDC9-206ENST00000601154 RNF180Q86T96 592 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 REPS2Q8NFH8 660 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 MYLIPQ8WY64 445 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 RNPC3Q96LT9 517 aaKnown RBP9.99□□□□□ -0.81
CCDC9-206ENST00000601154 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.99□□□□□ -0.81
CCDC9-206ENST00000601154 ARPP21Q9UBL0 812 aaPredicted RBP9.99□□□□□ -0.81
CCDC9-206ENST00000601154 ZHX1Q9UKY1 873 aaPredicted RBP9.99□□□□□ -0.81
CCDC9-206ENST00000601154 ZNF214Q9UL59 606 aaPredicted RBP9.99□□□□□ -0.81
CCDC9-206ENST00000601154 PHF24Q9UPV7 400 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 CNPY2Q9Y2B0 182 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 A0A0C4DFX4 3053 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 RLFQ13129 1914 aa9.99□□□□□ -0.81
CCDC9-206ENST00000601154 MINDY4BA8MYZ0 360 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 ZNF865P0CJ78 1059 aaPredicted RBP9.98□□□□□ -0.81
CCDC9-206ENST00000601154 AKR1A1P14550 325 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 RAG1P15918 1043 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 TSHZ3Q63HK5 1081 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 ZSCAN25Q6NSZ9 544 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 CPXCR1Q8N123 301 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 MAFAQ8NHW3 353 aaPredicted RBP9.98□□□□□ -0.81
CCDC9-206ENST00000601154 DDX11Q96FC9 970 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 SLF1Q9BQI6 1058 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 TEX13BQ9BXU2 312 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 LRRCC1Q9C099 1032 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 TTYH1Q9H313 450 aaPredicted RBP9.98□□□□□ -0.81
CCDC9-206ENST00000601154 SEMA6BQ9H3T3 888 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 MKNK2Q9HBH9 465 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 TMEM39AQ9NV64 488 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 NRBP1Q9UHY1 535 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 ISY1Q9ULR0 285 aaKnown RBP9.98□□□□□ -0.81
CCDC9-206ENST00000601154 ADAMTS5Q9UNA0 930 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 TACC3Q9Y6A5 838 aa9.98□□□□□ -0.81
CCDC9-206ENST00000601154 MYADML2A6NDP7 307 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 F5H6K3 240 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 ADAMTS4O75173 837 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 PRDM1O75626 825 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 NDUFB10O96000 172 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 FOSL2P15408 326 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 RASA1P20936 1047 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 IRX5P78411 483 aaPredicted RBP9.97□□□□□ -0.81
CCDC9-206ENST00000601154 SMAD3P84022 425 aaKnown RBP9.97□□□□□ -0.81
CCDC9-206ENST00000601154 KLRC3Q07444 240 aa9.97□□□□□ -0.81
CCDC9-206ENST00000601154 C1orf53Q5VUE5 145 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms